RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 ZBTB2Q8N680 514 aa3.61□□□□□ -1.83
MDM2-227ENST00000540709 C11orf65Q8NCR3 313 aa3.61□□□□□ -1.83
MDM2-227ENST00000540709 BEST2Q8NFU1 509 aa3.61□□□□□ -1.83
MDM2-227ENST00000540709 TMEM255BQ8WV15 326 aa3.61□□□□□ -1.83
MDM2-227ENST00000540709 TRMT61BQ9BVS5 477 aaKnown RBP3.61□□□□□ -1.83
MDM2-227ENST00000540709 C20orf141Q9NUB4 165 aa3.61□□□□□ -1.83
MDM2-227ENST00000540709 C1RLQ9NZP8 487 aa3.61□□□□□ -1.83
MDM2-227ENST00000540709 PADI1Q9ULC6 663 aa3.61□□□□□ -1.83
MDM2-227ENST00000540709 TMEM202A6NGA9 273 aa3.6□□□□□ -1.83
MDM2-227ENST00000540709 IFNL4K9M1U5 179 aa3.6□□□□□ -1.83
MDM2-227ENST00000540709 SNAP23O00161 211 aa3.6□□□□□ -1.83
MDM2-227ENST00000540709 CAPN9O14815 690 aa3.6□□□□□ -1.83
MDM2-227ENST00000540709 HEXAP06865 529 aa3.6□□□□□ -1.83
MDM2-227ENST00000540709 IFIT1P09914 478 aaKnown RBP3.6□□□□□ -1.83
MDM2-227ENST00000540709 IRF1P10914 325 aa3.6□□□□□ -1.83
MDM2-227ENST00000540709 AGAP20933 346 aa3.6□□□□□ -1.83
MDM2-227ENST00000540709 GGT5P36269 586 aa3.6□□□□□ -1.83
MDM2-227ENST00000540709 PDE1BQ01064 536 aa3.6□□□□□ -1.83
MDM2-227ENST00000540709 EFR3AQ14156 821 aa3.6□□□□□ -1.83
MDM2-227ENST00000540709 RBM39Q14498 530 aaKnown RBP3.6□□□□□ -1.83
MDM2-227ENST00000540709 C2orf68Q2NKX9 166 aa3.6□□□□□ -1.83
MDM2-227ENST00000540709 SGO1Q5FBB7 561 aa3.6□□□□□ -1.83
MDM2-227ENST00000540709 ZNF766Q5HY98 468 aa3.6□□□□□ -1.83
MDM2-227ENST00000540709 KCNT1Q5JUK3 1230 aa3.6□□□□□ -1.83
MDM2-227ENST00000540709 HIST2H2BCQ6DN03 193 aa3.6□□□□□ -1.83
MDM2-227ENST00000540709 HIST2H2BDQ6DRA6 164 aa3.6□□□□□ -1.83
MDM2-227ENST00000540709 MARK2Q7KZI7 788 aaKnown RBP3.6□□□□□ -1.83
MDM2-227ENST00000540709 EPHX4Q8IUS5 362 aa3.6□□□□□ -1.83
MDM2-227ENST00000540709 KLHDC8BQ8IXV7 354 aa3.6□□□□□ -1.83
MDM2-227ENST00000540709 ZNF34Q8IZ26 560 aa3.6□□□□□ -1.83
MDM2-227ENST00000540709 METTL27Q8N6F8 245 aaPredicted RBP3.6□□□□□ -1.83
MDM2-227ENST00000540709 HUS1BQ8NHY5 278 aa3.6□□□□□ -1.83
MDM2-227ENST00000540709 LNX1Q8TBB1 728 aaPredicted RBP3.6□□□□□ -1.83
MDM2-227ENST00000540709 ZNF583Q96ND8 569 aa3.6□□□□□ -1.83
MDM2-227ENST00000540709 PGLYRP2Q96PD5 576 aa3.6□□□□□ -1.83
MDM2-227ENST00000540709 MTERF1Q99551 399 aaKnown RBP3.6□□□□□ -1.83
MDM2-227ENST00000540709 LBHD1Q9BQE6 289 aaPredicted RBP3.6□□□□□ -1.83
MDM2-227ENST00000540709 HERPUD2Q9BSE4 406 aa3.6□□□□□ -1.83
MDM2-227ENST00000540709 FBRSL1Q9HCM7 1045 aaKnown RBP3.6□□□□□ -1.83
MDM2-227ENST00000540709 ZNF334Q9HCZ1 680 aaPredicted RBP3.6□□□□□ -1.83
MDM2-227ENST00000540709 MKKSQ9NPJ1 570 aaPredicted RBP3.6□□□□□ -1.83
MDM2-227ENST00000540709 TTC7AQ9ULT0 858 aaPredicted RBP3.6□□□□□ -1.83
MDM2-227ENST00000540709 FAF1Q9UNN5 650 aaPredicted RBP3.6□□□□□ -1.83
MDM2-227ENST00000540709 STON1Q9Y6Q2 735 aa3.6□□□□□ -1.83
MDM2-227ENST00000540709 GOLGA6L10A0A0M3HER8 536 aa3.59□□□□□ -1.83
MDM2-227ENST00000540709 TNPO2O14787 897 aaKnown RBP3.59□□□□□ -1.83
MDM2-227ENST00000540709 TFP02787 698 aa3.59□□□□□ -1.83
MDM2-227ENST00000540709 ITGA2P17301 1181 aa3.59□□□□□ -1.83
MDM2-227ENST00000540709 MARK3P27448 753 aa3.59□□□□□ -1.83
MDM2-227ENST00000540709 BDKRB2P30411 391 aa3.59□□□□□ -1.83
MDM2-227ENST00000540709 SHMT1P34896 483 aa3.59□□□□□ -1.83
MDM2-227ENST00000540709 PSMC2P35998 433 aaKnown RBP3.59□□□□□ -1.83
MDM2-227ENST00000540709 GNAQP50148 359 aa3.59□□□□□ -1.83
MDM2-227ENST00000540709 CLCNKAP51800 687 aa3.59□□□□□ -1.83
MDM2-227ENST00000540709 EFNA5P52803 228 aa3.59□□□□□ -1.83
MDM2-227ENST00000540709 CRIP2P52943 208 aaPredicted RBP3.59□□□□□ -1.83
MDM2-227ENST00000540709 SEC61BP60468 96 aaKnown RBP3.59□□□□□ -1.83
MDM2-227ENST00000540709 ISL1P61371 349 aa3.59□□□□□ -1.83
MDM2-227ENST00000540709 UFM1P61960 85 aa3.59□□□□□ -1.83
MDM2-227ENST00000540709 RPP30P78346 268 aaKnown RBP3.59□□□□□ -1.83
MDM2-227ENST00000540709 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.59□□□□□ -1.83
MDM2-227ENST00000540709 PLA2G4FQ68DD2 849 aa3.59□□□□□ -1.83
MDM2-227ENST00000540709 C19orf48Q6RUI8 117 aa3.59□□□□□ -1.83
MDM2-227ENST00000540709 BBS12Q6ZW61 710 aa3.59□□□□□ -1.83
MDM2-227ENST00000540709 HAPLN4Q86UW8 402 aa3.59□□□□□ -1.83
MDM2-227ENST00000540709 ANKRD18AQ8IVF6 992 aa3.59□□□□□ -1.83
MDM2-227ENST00000540709 CPOQ8IVL8 374 aa3.59□□□□□ -1.83
MDM2-227ENST00000540709 FOXRED2Q8IWF2 684 aa3.59□□□□□ -1.83
MDM2-227ENST00000540709 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.59□□□□□ -1.83
MDM2-227ENST00000540709 RNF113BQ8IZP6 322 aaKnown RBP3.59□□□□□ -1.83
MDM2-227ENST00000540709 KLHL15Q96M94 604 aa3.59□□□□□ -1.83
MDM2-227ENST00000540709 ISCA1Q9BUE6 129 aa3.59□□□□□ -1.83
MDM2-227ENST00000540709 GPR63Q9BZJ6 419 aa3.59□□□□□ -1.83
MDM2-227ENST00000540709 ESRP2Q9H6T0 727 aaKnown RBP3.59□□□□□ -1.83
MDM2-227ENST00000540709 BEX4Q9NWD9 120 aaPredicted RBP3.59□□□□□ -1.83
MDM2-227ENST00000540709 HSPB7Q9UBY9 170 aa3.59□□□□□ -1.83
MDM2-227ENST00000540709 GAB2Q9UQC2 676 aa3.59□□□□□ -1.83
MDM2-227ENST00000540709 GPR52Q9Y2T5 361 aa3.59□□□□□ -1.83
MDM2-227ENST00000540709 AMDHD2Q9Y303 409 aa3.59□□□□□ -1.83
MDM2-227ENST00000540709 ADAM18Q9Y3Q7 739 aa3.59□□□□□ -1.83
MDM2-227ENST00000540709 KIF26BQ2KJY2 2108 aa3.58□□□□□ -1.84
MDM2-227ENST00000540709 ASPDHA6ND91 283 aa3.58□□□□□ -1.84
MDM2-227ENST00000540709 SEC14L5O43304 696 aa3.58□□□□□ -1.84
MDM2-227ENST00000540709 ZG16O60844 167 aa3.58□□□□□ -1.84
MDM2-227ENST00000540709 PRSS1P07477 247 aa3.58□□□□□ -1.84
MDM2-227ENST00000540709 HLA-DOBP13765 273 aa3.58□□□□□ -1.84
MDM2-227ENST00000540709 CCR5P51681 352 aa3.58□□□□□ -1.84
MDM2-227ENST00000540709 LINC01547P58512 204 aaPredicted RBP3.58□□□□□ -1.84
MDM2-227ENST00000540709 NAE1Q13564 534 aa3.58□□□□□ -1.84
MDM2-227ENST00000540709 RNPS1Q15287 305 aaKnown RBP3.58□□□□□ -1.84
MDM2-227ENST00000540709 ADAM5Q6NVV9 412 aa3.58□□□□□ -1.84
MDM2-227ENST00000540709 KCTD18Q6PI47 426 aaPredicted RBP3.58□□□□□ -1.84
MDM2-227ENST00000540709 GFRALQ6UXV0 394 aa3.58□□□□□ -1.84
MDM2-227ENST00000540709 KCTD8Q6ZWB6 473 aa3.58□□□□□ -1.84
MDM2-227ENST00000540709 LINGO2Q7L985 606 aa3.58□□□□□ -1.84
MDM2-227ENST00000540709 TMEM219Q86XT9 240 aa3.58□□□□□ -1.84
MDM2-227ENST00000540709 WDR63Q8IWG1 891 aa3.58□□□□□ -1.84
MDM2-227ENST00000540709 SPATA6LQ8N4H0 392 aa3.58□□□□□ -1.84
MDM2-227ENST00000540709 HMGCLL1Q8TB92 370 aa3.58□□□□□ -1.84
MDM2-227ENST00000540709 ABTB1Q969K4 478 aaPredicted RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms