RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 DHX38Q92620 1227 aaKnown RBP9.5□□□□□ -0.89
CTNNA1-243ENST00000540387 EMID1Q96A84 441 aaPredicted RBP9.5□□□□□ -0.89
CTNNA1-243ENST00000540387 CCDC120Q96HB5 630 aa9.5□□□□□ -0.89
CTNNA1-243ENST00000540387 TM9SF2Q99805 663 aa9.5□□□□□ -0.89
CTNNA1-243ENST00000540387 MIR1-1HGQ9H1L0 117 aa9.5□□□□□ -0.89
CTNNA1-243ENST00000540387 EPS8L2Q9H6S3 715 aa9.5□□□□□ -0.89
CTNNA1-243ENST00000540387 SCPEP1Q9HB40 452 aa9.5□□□□□ -0.89
CTNNA1-243ENST00000540387 SPC25Q9HBM1 224 aa9.5□□□□□ -0.89
CTNNA1-243ENST00000540387 SAGE1Q9NXZ1 904 aa9.5□□□□□ -0.89
CTNNA1-243ENST00000540387 NUP50Q9UKX7 468 aa9.5□□□□□ -0.89
CTNNA1-243ENST00000540387 CDY2AQ9Y6F7 541 aa9.5□□□□□ -0.89
CTNNA1-243ENST00000540387 CDY1Q9Y6F8 540 aa9.5□□□□□ -0.89
CTNNA1-243ENST00000540387 UBE4BO95155 1302 aa9.5□□□□□ -0.89
CTNNA1-243ENST00000540387 ZNF236Q9UL36 1845 aa9.5□□□□□ -0.89
CTNNA1-243ENST00000540387 ARPC4-TTLL3A0A0A6YYG9 625 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 FAM149AA5PLN7 773 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 PDZK1P1A8MUH7 402 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 NEMP1O14524 444 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 TBX1O43435 398 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 TADA2AO75478 443 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 CD4P01730 458 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 PRKCHP24723 683 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 FMO4P31512 558 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 PSME3P61289 254 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 CACNB2Q08289 660 aaPredicted RBP9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 SMARCB1Q12824 385 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 FAM214AQ32MH5 1076 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 MTERF2Q49AM1 385 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 CYBRD1Q53TN4 286 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 C1orf220Q5T0J3 134 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 STXBP5Q5T5C0 1151 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 TMEM236Q5W0B7 351 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 FAM160B1Q5W0V3 765 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 ZNF544Q6NX49 715 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 BBS12Q6ZW61 710 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 ADCK1Q86TW2 530 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 PCDH20Q8N6Y1 951 aaKnown RBP9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 OR2T34Q8NGX1 318 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 PPTC7Q8NI37 304 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 AGR3Q8TD06 166 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 HERVK_113Q902F9 699 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 PPP1R36Q96LQ0 422 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 TTYH2Q9BSA4 534 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 DGCR6LQ9BY27 220 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 ALOXE3Q9BYJ1 711 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 KCNN2Q9H2S1 579 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 GPRC5CQ9NQ84 441 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 CYP26B1Q9NR63 512 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 TCAF2A6NFQ2 919 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 A8MV72 311 aaPredicted RBP9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 M0R3G1 203 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 PTTG1O95997 202 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 CYBAP13498 195 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 IMPDH1P20839 514 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 GSTM2P28161 218 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 CBX5P45973 191 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 SERPINB10P48595 397 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 SOX10P56693 466 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 DYNLT1P63172 113 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 TRAP1Q12931 704 aaKnown RBP9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 GNA13Q14344 377 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 GALNT3Q14435 633 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 DGUOKQ16854 277 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 GEN1Q17RS7 908 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 TFDP3Q5H9I0 405 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 SHEQ5VZ18 495 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 PLPPR4Q7Z2D5 763 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 SLC9A9Q8IVB4 645 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 UNC45BQ8IWX7 931 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 DAW1Q8N136 415 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 DNAJC5GQ8N7S2 189 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 NDNFQ8TB73 568 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 ACTL9Q8TC94 416 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 RAET1EQ8TD07 263 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 SGCDQ92629 289 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 SH3KBP1Q96B97 665 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 TOE1Q96GM8 510 aaKnown RBP9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 HEXIM2Q96MH2 286 aaKnown RBP9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 GDF15Q99988 308 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 PLAC1Q9HBJ0 212 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 WASH6PQ9NQA3 447 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 COQ3Q9NZJ6 369 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 HCN4Q9Y3Q4 1203 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 PCDHB12Q9Y5F1 795 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 ACSL4O60488 711 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 SEC24AO95486 1093 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 LGALS2P05162 132 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 MMP3P08254 477 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 ZNF286BP0CG31 522 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 GFAPP14136 432 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 PSMD8P48556 350 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 NRLP54845 237 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 GJA9P57773 515 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 MPP1Q00013 466 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 RAD51Q06609 339 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 MAMLD1Q13495 774 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 ATP6AP1Q15904 470 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 ERAP2Q6P179 960 aa9.49□□□□□ -0.89
CTNNA1-243ENST00000540387 USP51Q70EK9 711 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms