RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 APOBEC3BQ9UH17 382 aaKnown RBP15.08■□□□□ 0.01
UBE3B-212ENST00000540230 ADGRG1Q9Y653 693 aa15.08■□□□□ 0.01
UBE3B-212ENST00000540230 GOLGA4Q13439 2230 aaKnown RBP15.08■□□□□ 0
UBE3B-212ENST00000540230 FREM2Q5SZK8 3169 aa15.08■□□□□ 0
UBE3B-212ENST00000540230 CCDC66A2RUB6 948 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 TMEM202A6NGA9 273 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 GCATO75600 419 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 TRIM16O95361 564 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 MT-CYBP00156 380 aaPredicted RBP15.07■□□□□ 0
UBE3B-212ENST00000540230 PYGMP11217 842 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 EPHB1P54762 984 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 GSDMDP57764 484 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 PTK2BQ14289 1009 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 GALNT3Q14435 633 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 TCEA2Q15560 299 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 QPCTQ16769 361 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 ALG11Q2TAA5 492 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 TEX44Q53QW1 395 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 ENPP7Q6UWV6 458 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 DHRS13Q6UX07 377 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 LMX1AQ8TE12 382 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 TFB1MQ8WVM0 346 aaKnown RBP15.07■□□□□ 0
UBE3B-212ENST00000540230 TADA1Q96BN2 335 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 IMP4Q96G21 291 aaKnown RBP15.07■□□□□ 0
UBE3B-212ENST00000540230 PDXPQ96GD0 296 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 CALR3Q96L12 384 aaKnown RBP15.07■□□□□ 0
UBE3B-212ENST00000540230 TRIB3Q96RU7 358 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 FAM118BQ9BPY3 351 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 TMEM121BQ9BXQ6 578 aaPredicted RBP15.07■□□□□ 0
UBE3B-212ENST00000540230 CLPBQ9H078 707 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 CD84Q9UIB8 345 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 LY6G6EA0A0G2JKS1 128 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 CAPN8A6NHC0 703 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 GOLGA6L6A8MZA4 724 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 F5H423 210 aaPredicted RBP15.07■□□□□ 0
UBE3B-212ENST00000540230 H3BM21 787 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 TOR1BO14657 336 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 AQP9O43315 295 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 TRIM23P36406 574 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 RWDD2BP57060 319 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 PTSQ03393 145 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 ZNF211Q13398 564 aaPredicted RBP15.07■□□□□ 0
UBE3B-212ENST00000540230 ARHGEF7Q14155 803 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 NOMO1Q15155 1222 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 DEFB133Q30KQ1 61 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 PRRT3Q5FWE3 981 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 PNCKQ6P2M8 343 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 BZW1Q7L1Q6 419 aaKnown RBP15.07■□□□□ 0
UBE3B-212ENST00000540230 KDELC2Q7Z4H8 507 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 TECPR1Q7Z6L1 1165 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 TEKT5Q96M29 485 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 QKIQ96PU8 341 aaKnown RBP eCLIP15.07■□□□□ 0
UBE3B-212ENST00000540230 OSBPL8Q9BZF1 889 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 SLC25A51Q9H1U9 297 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 GLOD4Q9HC38 313 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 FGF22Q9HCT0 170 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 MRPL40Q9NQ50 206 aaKnown RBP15.07■□□□□ 0
UBE3B-212ENST00000540230 HAUS2Q9NVX0 235 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 UBP1Q9NZI7 540 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 U3KQA8 63 aa15.07■□□□□ 0
UBE3B-212ENST00000540230 C1QTNF9BB2RNN3 333 aa15.06■□□□□ 0
UBE3B-212ENST00000540230 APOC4-APOC2K7ER74 178 aa15.06■□□□□ 0
UBE3B-212ENST00000540230 PSMD11O00231 422 aa15.06■□□□□ 0
UBE3B-212ENST00000540230 DDX3YO15523 660 aaKnown RBP15.06■□□□□ 0
UBE3B-212ENST00000540230 CLDN7O95471 211 aa15.06■□□□□ 0
UBE3B-212ENST00000540230 SOD1P00441 154 aa15.06■□□□□ 0
UBE3B-212ENST00000540230 APOC2P02655 101 aa15.06■□□□□ 0
UBE3B-212ENST00000540230 C1QTNF9P0C862 333 aa15.06■□□□□ 0
UBE3B-212ENST00000540230 COPS2P61201 443 aa15.06■□□□□ 0
UBE3B-212ENST00000540230 OTUD4Q01804 1114 aaKnown RBP15.06■□□□□ 0
UBE3B-212ENST00000540230 PPARDQ03181 441 aa15.06■□□□□ 0
UBE3B-212ENST00000540230 PCSK7Q16549 785 aa15.06■□□□□ 0
UBE3B-212ENST00000540230 CDKN3Q16667 212 aa15.06■□□□□ 0
UBE3B-212ENST00000540230 FAXCQ5TGI0 409 aa15.06■□□□□ 0
UBE3B-212ENST00000540230 RD3Q7Z3Z2 195 aa15.06■□□□□ 0
UBE3B-212ENST00000540230 PEX26Q7Z412 305 aa15.06■□□□□ 0
UBE3B-212ENST00000540230 HID1Q8IV36 788 aa15.06■□□□□ 0
UBE3B-212ENST00000540230 ACTL9Q8TC94 416 aa15.06■□□□□ 0
UBE3B-212ENST00000540230 OR1E3Q8WZA6 343 aa15.06■□□□□ 0
UBE3B-212ENST00000540230 SCAMP4Q969E2 229 aa15.06■□□□□ 0
UBE3B-212ENST00000540230 APOLD1Q96LR9 279 aa15.06■□□□□ 0
UBE3B-212ENST00000540230 WDR92Q96MX6 357 aa15.06■□□□□ 0
UBE3B-212ENST00000540230 NLGN3Q9NZ94 848 aa15.06■□□□□ 0
UBE3B-212ENST00000540230 AMFRQ9UKV5 643 aa15.06■□□□□ 0
UBE3B-212ENST00000540230 NEUROG3Q9Y4Z2 214 aa15.06■□□□□ 0
UBE3B-212ENST00000540230 MAP1BP46821 2468 aaKnown RBP15.05■□□□□ 0
UBE3B-212ENST00000540230 ANKRD66B4E2M5 251 aa15.05■□□□□ -0
UBE3B-212ENST00000540230 RFPL3O75679 317 aa15.05■□□□□ -0
UBE3B-212ENST00000540230 PIRTP0C851 137 aa15.05■□□□□ -0
UBE3B-212ENST00000540230 TSHRP16473 764 aa15.05■□□□□ -0
UBE3B-212ENST00000540230 CKMT2P17540 419 aa15.05■□□□□ -0
UBE3B-212ENST00000540230 NFKB1P19838 968 aa15.05■□□□□ -0
UBE3B-212ENST00000540230 CA4P22748 312 aa15.05■□□□□ -0
UBE3B-212ENST00000540230 NFKBIAP25963 317 aa15.05■□□□□ -0
UBE3B-212ENST00000540230 RBL1P28749 1068 aa15.05■□□□□ -0
UBE3B-212ENST00000540230 PTPN7P35236 360 aa15.05■□□□□ -0
UBE3B-212ENST00000540230 HK3P52790 923 aa15.05■□□□□ -0
UBE3B-212ENST00000540230 STC1P52823 247 aa15.05■□□□□ -0
UBE3B-212ENST00000540230 KIAA1024LP59773 190 aa15.05■□□□□ -0
UBE3B-212ENST00000540230 SRP54P61011 504 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms