RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 TCHHL1Q5QJ38 904 aaPredicted RBP17.93■□□□□ 0.46
GNE-204ENST00000539208 BNC2Q6ZN30 1099 aaPredicted RBP17.93■□□□□ 0.46
GNE-204ENST00000539208 PIM3Q86V86 326 aa17.93■□□□□ 0.46
GNE-204ENST00000539208 DENND1CQ8IV53 801 aa17.93■□□□□ 0.46
GNE-204ENST00000539208 RCN3Q96D15 328 aa17.93■□□□□ 0.46
GNE-204ENST00000539208 PHF21BQ96EK2 531 aa17.93■□□□□ 0.46
GNE-204ENST00000539208 MYRFLQ96LU7 910 aa17.93■□□□□ 0.46
GNE-204ENST00000539208 PRICKLE1Q96MT3 831 aaPredicted RBP17.93■□□□□ 0.46
GNE-204ENST00000539208 AARSD1Q9BTE6 412 aaKnown RBP17.93■□□□□ 0.46
GNE-204ENST00000539208 POLR3BQ9NW08 1133 aaPredicted RBP17.93■□□□□ 0.46
GNE-204ENST00000539208 AFF4Q9UHB7 1163 aaKnown RBP17.93■□□□□ 0.46
GNE-204ENST00000539208 TBC1D30Q9Y2I9 924 aa17.93■□□□□ 0.46
GNE-204ENST00000539208 TCAF2A6NFQ2 919 aa17.93■□□□□ 0.46
GNE-204ENST00000539208 STC2O76061 302 aa17.93■□□□□ 0.46
GNE-204ENST00000539208 KLKB1P03952 638 aa17.93■□□□□ 0.46
GNE-204ENST00000539208 CDC25CP30307 473 aa17.93■□□□□ 0.46
GNE-204ENST00000539208 HERVK_113P63132 956 aa17.93■□□□□ 0.46
GNE-204ENST00000539208 TAF1AQ15573 450 aaPredicted RBP17.93■□□□□ 0.46
GNE-204ENST00000539208 PIGGQ5H8A4 983 aa17.93■□□□□ 0.46
GNE-204ENST00000539208 PTERQ96BW5 349 aa17.93■□□□□ 0.46
GNE-204ENST00000539208 ASB2Q96Q27 587 aa17.93■□□□□ 0.46
GNE-204ENST00000539208 TCF12Q99081 682 aa17.93■□□□□ 0.46
GNE-204ENST00000539208 ECSITQ9BQ95 431 aa17.93■□□□□ 0.46
GNE-204ENST00000539208 SPON2Q9BUD6 331 aa17.93■□□□□ 0.46
GNE-204ENST00000539208 ERVK-6Q9BXR3 956 aa17.93■□□□□ 0.46
GNE-204ENST00000539208 VCX3BQ9H321 246 aa17.93■□□□□ 0.46
GNE-204ENST00000539208 TNFRSF12AQ9NP84 129 aa17.93■□□□□ 0.46
GNE-204ENST00000539208 UTP6Q9NYH9 597 aaKnown RBP17.93■□□□□ 0.46
GNE-204ENST00000539208 TRAF6Q9Y4K3 522 aa17.93■□□□□ 0.46
GNE-204ENST00000539208 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.92■□□□□ 0.46
GNE-204ENST00000539208 ZNF37AP17032 561 aaPredicted RBP17.92■□□□□ 0.46
GNE-204ENST00000539208 PLK1P53350 603 aa17.92■□□□□ 0.46
GNE-204ENST00000539208 ZNF177Q13360 481 aaPredicted RBP17.92■□□□□ 0.46
GNE-204ENST00000539208 GSTA3Q16772 222 aa17.92■□□□□ 0.46
GNE-204ENST00000539208 ZNF423Q2M1K9 1284 aa17.92■□□□□ 0.46
GNE-204ENST00000539208 RNF111Q6ZNA4 994 aa17.92■□□□□ 0.46
GNE-204ENST00000539208 SPNS2Q8IVW8 549 aa17.92■□□□□ 0.46
GNE-204ENST00000539208 SH3RF2Q8TEC5 729 aa17.92■□□□□ 0.46
GNE-204ENST00000539208 NSMCE3Q96MG7 304 aa17.92■□□□□ 0.46
GNE-204ENST00000539208 CDRT15Q96T59 188 aa17.92■□□□□ 0.46
GNE-204ENST00000539208 PPP1R12CQ9BZL4 782 aa17.92■□□□□ 0.46
GNE-204ENST00000539208 TFB2MQ9H5Q4 396 aaKnown RBP17.92■□□□□ 0.46
GNE-204ENST00000539208 TRPM5Q9NZQ8 1165 aa17.92■□□□□ 0.46
GNE-204ENST00000539208 BCAP29Q9UHQ4 241 aa17.92■□□□□ 0.46
GNE-204ENST00000539208 A0A1B0GVM2 712 aa17.91■□□□□ 0.46
GNE-204ENST00000539208 UBFD1O14562 309 aaKnown RBP17.91■□□□□ 0.46
GNE-204ENST00000539208 SLC4A1P02730 911 aa17.91■□□□□ 0.46
GNE-204ENST00000539208 RHOCP08134 193 aa17.91■□□□□ 0.46
GNE-204ENST00000539208 PDHA1P08559 390 aa17.91■□□□□ 0.46
GNE-204ENST00000539208 PIRTP0C851 137 aa17.91■□□□□ 0.46
GNE-204ENST00000539208 PMLP29590 882 aa17.91■□□□□ 0.46
GNE-204ENST00000539208 CORO1AP31146 461 aaKnown RBP17.91■□□□□ 0.46
GNE-204ENST00000539208 RGRP47804 291 aa17.91■□□□□ 0.46
GNE-204ENST00000539208 PRMT2P55345 433 aa17.91■□□□□ 0.46
GNE-204ENST00000539208 C1QTNF8P60827 252 aa17.91■□□□□ 0.46
GNE-204ENST00000539208 XIAPP98170 497 aa17.91■□□□□ 0.46
GNE-204ENST00000539208 SQLEQ14534 574 aa17.91■□□□□ 0.46
GNE-204ENST00000539208 UNC50Q53HI1 259 aa17.91■□□□□ 0.46
GNE-204ENST00000539208 ADGRF1Q5T601 910 aa17.91■□□□□ 0.46
GNE-204ENST00000539208 AFTPHQ6ULP2 937 aa17.91■□□□□ 0.46
GNE-204ENST00000539208 IZUMO2Q6UXV1 221 aa17.91■□□□□ 0.46
GNE-204ENST00000539208 EFCAB3Q8N7B9 438 aa17.91■□□□□ 0.46
GNE-204ENST00000539208 MARK4Q96L34 752 aa17.91■□□□□ 0.46
GNE-204ENST00000539208 WDR41Q9HAD4 459 aa17.91■□□□□ 0.46
GNE-204ENST00000539208 ZDHHC7Q9NXF8 308 aa17.91■□□□□ 0.46
GNE-204ENST00000539208 SPO11Q9Y5K1 396 aa17.91■□□□□ 0.46
GNE-204ENST00000539208 ACTL7AQ9Y615 435 aa17.91■□□□□ 0.46
GNE-204ENST00000539208 TET1Q8NFU7 2136 aa17.91■□□□□ 0.46
GNE-204ENST00000539208 SKAP2O75563 359 aaPredicted RBP17.91■□□□□ 0.46
GNE-204ENST00000539208 ABLIM3O94929 683 aa17.91■□□□□ 0.46
GNE-204ENST00000539208 PRLP01236 227 aa17.91■□□□□ 0.46
GNE-204ENST00000539208 RPL17P18621 184 aaKnown RBP17.91■□□□□ 0.46
GNE-204ENST00000539208 SCNN1BP51168 640 aa17.91■□□□□ 0.46
GNE-204ENST00000539208 ART3Q13508 389 aa17.91■□□□□ 0.46
GNE-204ENST00000539208 CYTH1Q15438 398 aa17.91■□□□□ 0.46
GNE-204ENST00000539208 MAPRE2Q15555 327 aa17.91■□□□□ 0.46
GNE-204ENST00000539208 ZNF461Q8TAF7 563 aa17.91■□□□□ 0.46
GNE-204ENST00000539208 TRMT2BQ96GJ1 504 aaKnown RBP17.91■□□□□ 0.46
GNE-204ENST00000539208 NR1H4Q96RI1 486 aaPredicted RBP17.91■□□□□ 0.46
GNE-204ENST00000539208 VN1R3Q9BXE9 311 aa17.91■□□□□ 0.46
GNE-204ENST00000539208 TDRD1Q9BXT4 1180 aaKnown RBP17.91■□□□□ 0.46
GNE-204ENST00000539208 SYTL2Q9HCH5 934 aa17.91■□□□□ 0.46
GNE-204ENST00000539208 SCUBE2Q9NQ36 999 aa17.91■□□□□ 0.46
GNE-204ENST00000539208 C2orf81A6NN90 581 aa17.9■□□□□ 0.46
GNE-204ENST00000539208 H3BNX3 289 aa17.9■□□□□ 0.46
GNE-204ENST00000539208 CASQ2O14958 399 aaPredicted RBP17.9■□□□□ 0.46
GNE-204ENST00000539208 UBDO15205 165 aa17.9■□□□□ 0.46
GNE-204ENST00000539208 SUPT7LO94864 414 aa17.9■□□□□ 0.46
GNE-204ENST00000539208 PARNO95453 639 aaKnown RBP17.9■□□□□ 0.46
GNE-204ENST00000539208 SEC24AO95486 1093 aa17.9■□□□□ 0.46
GNE-204ENST00000539208 F11P03951 625 aa17.9■□□□□ 0.46
GNE-204ENST00000539208 CDC16Q13042 620 aa17.9■□□□□ 0.46
GNE-204ENST00000539208 STX5Q13190 355 aa17.9■□□□□ 0.46
GNE-204ENST00000539208 PTK2BQ14289 1009 aa17.9■□□□□ 0.46
GNE-204ENST00000539208 MICAL1Q8TDZ2 1067 aa17.9■□□□□ 0.46
GNE-204ENST00000539208 IGSF21Q96ID5 467 aa17.9■□□□□ 0.46
GNE-204ENST00000539208 DDX50Q9BQ39 737 aaKnown RBP17.9■□□□□ 0.46
GNE-204ENST00000539208 CLSTN3Q9BQT9 956 aa17.9■□□□□ 0.46
GNE-204ENST00000539208 KLF16Q9BXK1 252 aaPredicted RBP17.9■□□□□ 0.46
GNE-204ENST00000539208 ADAMTS6Q9UKP5 1117 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms