RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 WDR26Q9H7D7 661 aa14.99□□□□□ -0.01
RAB40B-202ENST00000538809 SUDS3Q9H7L9 328 aaPredicted RBP14.99□□□□□ -0.01
RAB40B-202ENST00000538809 GULP1Q9UBP9 304 aa14.99□□□□□ -0.01
RAB40B-202ENST00000538809 MOSPD1Q9UJG1 213 aa14.99□□□□□ -0.01
RAB40B-202ENST00000538809 PHTF1Q9UMS5 762 aa14.99□□□□□ -0.01
RAB40B-202ENST00000538809 PTPRQQ9UMZ3 2332 aa14.98□□□□□ -0.01
RAB40B-202ENST00000538809 A0A1W2PQ67 120 aa14.98□□□□□ -0.01
RAB40B-202ENST00000538809 GOLGA6CA6NDK9 693 aa14.98□□□□□ -0.01
RAB40B-202ENST00000538809 GOLGA6BA6NDN3 693 aa14.98□□□□□ -0.01
RAB40B-202ENST00000538809 TNFP01375 233 aa14.98□□□□□ -0.01
RAB40B-202ENST00000538809 MPOP05164 745 aa14.98□□□□□ -0.01
RAB40B-202ENST00000538809 PDHA1P08559 390 aa14.98□□□□□ -0.01
RAB40B-202ENST00000538809 GOLGA6DP0CG33 693 aa14.98□□□□□ -0.01
RAB40B-202ENST00000538809 CYP2A6P11509 494 aaPredicted RBP14.98□□□□□ -0.01
RAB40B-202ENST00000538809 FECHP22830 423 aa14.98□□□□□ -0.01
RAB40B-202ENST00000538809 ETV3P41162 512 aa14.98□□□□□ -0.01
RAB40B-202ENST00000538809 RPIAP49247 311 aa14.98□□□□□ -0.01
RAB40B-202ENST00000538809 ZNF75DP51815 510 aa14.98□□□□□ -0.01
RAB40B-202ENST00000538809 HADHBP55084 474 aaKnown RBP14.98□□□□□ -0.01
RAB40B-202ENST00000538809 SLC10A2Q12908 348 aaPredicted RBP14.98□□□□□ -0.01
RAB40B-202ENST00000538809 IHHQ14623 411 aa14.98□□□□□ -0.01
RAB40B-202ENST00000538809 IFI16Q16666 785 aaKnown RBP14.98□□□□□ -0.01
RAB40B-202ENST00000538809 FAM182AQ5T1J6 154 aa14.98□□□□□ -0.01
RAB40B-202ENST00000538809 TIGD7Q6NT04 549 aaPredicted RBP14.98□□□□□ -0.01
RAB40B-202ENST00000538809 ESRP1Q6NXG1 681 aaKnown RBP14.98□□□□□ -0.01
RAB40B-202ENST00000538809 PNCKQ6P2M8 343 aa14.98□□□□□ -0.01
RAB40B-202ENST00000538809 GKN2Q86XP6 184 aa14.98□□□□□ -0.01
RAB40B-202ENST00000538809 MAP7D3Q8IWC1 876 aa14.98□□□□□ -0.01
RAB40B-202ENST00000538809 CRELD1Q96HD1 420 aa14.98□□□□□ -0.01
RAB40B-202ENST00000538809 MRFAP1L1Q96HT8 127 aa14.98□□□□□ -0.01
RAB40B-202ENST00000538809 TSGA13Q96PP4 275 aa14.98□□□□□ -0.01
RAB40B-202ENST00000538809 RNF157Q96PX1 679 aa14.98□□□□□ -0.01
RAB40B-202ENST00000538809 POLR1EQ9GZS1 481 aaKnown RBP14.98□□□□□ -0.01
RAB40B-202ENST00000538809 GOLGA6AQ9NYA3 693 aa14.98□□□□□ -0.01
RAB40B-202ENST00000538809 PADI4Q9UM07 663 aa14.98□□□□□ -0.01
RAB40B-202ENST00000538809 GPR34Q9UPC5 381 aa14.98□□□□□ -0.01
RAB40B-202ENST00000538809 RAI2Q9Y5P3 530 aa14.98□□□□□ -0.01
RAB40B-202ENST00000538809 LRRD1A4D1F6 860 aa14.97□□□□□ -0.01
RAB40B-202ENST00000538809 MATN3O15232 486 aa14.97□□□□□ -0.01
RAB40B-202ENST00000538809 USP12O75317 370 aa14.97□□□□□ -0.01
RAB40B-202ENST00000538809 HLA-DQB2P05538 268 aa14.97□□□□□ -0.01
RAB40B-202ENST00000538809 CCNCP24863 283 aa14.97□□□□□ -0.01
RAB40B-202ENST00000538809 ARHGEF7Q14155 803 aa14.97□□□□□ -0.01
RAB40B-202ENST00000538809 LRRC38Q5VT99 294 aa14.97□□□□□ -0.01
RAB40B-202ENST00000538809 SLC9A4Q6AI14 798 aa14.97□□□□□ -0.01
RAB40B-202ENST00000538809 RFLNAQ6ZTI6 216 aa14.97□□□□□ -0.01
RAB40B-202ENST00000538809 USP45Q70EL2 814 aa14.97□□□□□ -0.01
RAB40B-202ENST00000538809 PDZD3Q86UT5 571 aa14.97□□□□□ -0.01
RAB40B-202ENST00000538809 HEATR4Q86WZ0 1026 aa14.97□□□□□ -0.01
RAB40B-202ENST00000538809 PLD5Q8N7P1 536 aa14.97□□□□□ -0.01
RAB40B-202ENST00000538809 ARL10Q8N8L6 244 aa14.97□□□□□ -0.01
RAB40B-202ENST00000538809 PIH1D2Q8WWB5 315 aa14.97□□□□□ -0.01
RAB40B-202ENST00000538809 NAT6Q93015 286 aa14.97□□□□□ -0.01
RAB40B-202ENST00000538809 DTD2Q96FN9 168 aa14.97□□□□□ -0.01
RAB40B-202ENST00000538809 MCCC1Q96RQ3 725 aaPredicted RBP14.97□□□□□ -0.01
RAB40B-202ENST00000538809 RBM15Q96T37 977 aaKnown RBP eCLIP14.97□□□□□ -0.01
RAB40B-202ENST00000538809 CCDC3Q9BQI4 270 aa14.97□□□□□ -0.01
RAB40B-202ENST00000538809 CYP4F12Q9HCS2 524 aa14.97□□□□□ -0.01
RAB40B-202ENST00000538809 RBM22Q9NW64 420 aaKnown RBP eCLIP14.97□□□□□ -0.01
RAB40B-202ENST00000538809 DTLQ9NZJ0 730 aa14.97□□□□□ -0.01
RAB40B-202ENST00000538809 RABGEF1Q9UJ41 708 aa14.97□□□□□ -0.01
RAB40B-202ENST00000538809 HYOU1Q9Y4L1 999 aa14.97□□□□□ -0.01
RAB40B-202ENST00000538809 A0A087WV48 116 aa14.96□□□□□ -0.01
RAB40B-202ENST00000538809 PRSS38A1L453 326 aa14.96□□□□□ -0.01
RAB40B-202ENST00000538809 FZD6O60353 706 aa14.96□□□□□ -0.01
RAB40B-202ENST00000538809 KRT1P04264 644 aa14.96□□□□□ -0.01
RAB40B-202ENST00000538809 MYCLP1P12525 358 aaPredicted RBP14.96□□□□□ -0.01
RAB40B-202ENST00000538809 TNNT1P13805 278 aa14.96□□□□□ -0.01
RAB40B-202ENST00000538809 KELP23276 732 aa14.96□□□□□ -0.01
RAB40B-202ENST00000538809 NFKBIAP25963 317 aa14.96□□□□□ -0.01
RAB40B-202ENST00000538809 ITPKBP27987 946 aa14.96□□□□□ -0.01
RAB40B-202ENST00000538809 TRIM23P36406 574 aa14.96□□□□□ -0.01
RAB40B-202ENST00000538809 EPHB1P54762 984 aa14.96□□□□□ -0.01
RAB40B-202ENST00000538809 GABREP78334 506 aa14.96□□□□□ -0.01
RAB40B-202ENST00000538809 ISXQ2M1V0 245 aa14.96□□□□□ -0.01
RAB40B-202ENST00000538809 C3orf38Q5JPI3 329 aa14.96□□□□□ -0.01
RAB40B-202ENST00000538809 RAET1GQ6H3X3 334 aa14.96□□□□□ -0.01
RAB40B-202ENST00000538809 Q6ZVL8 140 aa14.96□□□□□ -0.01
RAB40B-202ENST00000538809 SFTPA2Q8IWL1 248 aa14.96□□□□□ -0.01
RAB40B-202ENST00000538809 CBARPQ8N350 705 aaPredicted RBP14.96□□□□□ -0.01
RAB40B-202ENST00000538809 CCNYQ8ND76 341 aa14.96□□□□□ -0.01
RAB40B-202ENST00000538809 CCL4L1Q8NHW4 92 aa14.96□□□□□ -0.01
RAB40B-202ENST00000538809 SCG3Q8WXD2 468 aaKnown RBP14.96□□□□□ -0.01
RAB40B-202ENST00000538809 CCDC74AQ96AQ1 378 aa14.96□□□□□ -0.01
RAB40B-202ENST00000538809 HDAC11Q96DB2 347 aa14.96□□□□□ -0.01
RAB40B-202ENST00000538809 SCRN2Q96FV2 425 aa14.96□□□□□ -0.01
RAB40B-202ENST00000538809 TMEM168Q9H0V1 697 aa14.96□□□□□ -0.01
RAB40B-202ENST00000538809 PHPT1Q9NRX4 125 aaPredicted RBP14.96□□□□□ -0.01
RAB40B-202ENST00000538809 AMACRQ9UHK6 382 aa14.96□□□□□ -0.01
RAB40B-202ENST00000538809 CD84Q9UIB8 345 aa14.96□□□□□ -0.01
RAB40B-202ENST00000538809 CHKBQ9Y259 395 aa14.96□□□□□ -0.01
RAB40B-202ENST00000538809 PPIL1Q9Y3C6 166 aa14.96□□□□□ -0.01
RAB40B-202ENST00000538809 DGKBQ9Y6T7 804 aa14.96□□□□□ -0.01
RAB40B-202ENST00000538809 B4DGG1 531 aa14.95□□□□□ -0.02
RAB40B-202ENST00000538809 PSMD11O00231 422 aa14.95□□□□□ -0.02
RAB40B-202ENST00000538809 CCNB1P14635 433 aa14.95□□□□□ -0.02
RAB40B-202ENST00000538809 HOXB3P14651 431 aaPredicted RBP14.95□□□□□ -0.02
RAB40B-202ENST00000538809 EIF2S3P41091 472 aaKnown RBP14.95□□□□□ -0.02
RAB40B-202ENST00000538809 SLC1A1P43005 524 aa14.95□□□□□ -0.02
RAB40B-202ENST00000538809 MAGEA1P43355 309 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms