RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 HSPA1AP0DMV8 641 aaKnown RBP24.91■■□□□ 1.58
RAB40C-204ENST00000538492 HSPA1BP0DMV9 641 aaKnown RBP24.91■■□□□ 1.58
RAB40C-204ENST00000538492 PMLP29590 882 aa24.91■■□□□ 1.58
RAB40C-204ENST00000538492 PEX19P40855 299 aa24.91■■□□□ 1.58
RAB40C-204ENST00000538492 FASTKQ14296 549 aaKnown RBP24.91■■□□□ 1.58
RAB40C-204ENST00000538492 SMIM14Q96QK8 99 aa24.91■■□□□ 1.58
RAB40C-204ENST00000538492 SRRDQ9UH36 339 aa24.91■■□□□ 1.58
RAB40C-204ENST00000538492 LRFN2Q9ULH4 789 aa24.91■■□□□ 1.58
RAB40C-204ENST00000538492 LRRC14BA6NHZ5 514 aa24.91■■□□□ 1.58
RAB40C-204ENST00000538492 PPP6CO00743 305 aa24.91■■□□□ 1.58
RAB40C-204ENST00000538492 GJB5O95377 273 aa24.91■■□□□ 1.58
RAB40C-204ENST00000538492 SELPP16109 830 aa24.91■■□□□ 1.58
RAB40C-204ENST00000538492 SLC26A3P40879 764 aa24.91■■□□□ 1.58
RAB40C-204ENST00000538492 ALDH1A3P47895 512 aa24.91■■□□□ 1.58
RAB40C-204ENST00000538492 SCNN1BP51168 640 aa24.91■■□□□ 1.58
RAB40C-204ENST00000538492 PTK2BQ14289 1009 aa24.91■■□□□ 1.58
RAB40C-204ENST00000538492 GPNMBQ14956 572 aa24.91■■□□□ 1.58
RAB40C-204ENST00000538492 MMEL1Q495T6 779 aa24.91■■□□□ 1.58
RAB40C-204ENST00000538492 UNC50Q53HI1 259 aa24.91■■□□□ 1.58
RAB40C-204ENST00000538492 UBA6A0AVT1 1052 aaPredicted RBP24.9■■□□□ 1.58
RAB40C-204ENST00000538492 PSMD12O00232 456 aaPredicted RBP24.9■■□□□ 1.58
RAB40C-204ENST00000538492 CASQ2O14958 399 aaPredicted RBP24.9■■□□□ 1.58
RAB40C-204ENST00000538492 TBC1D4O60343 1298 aa24.9■■□□□ 1.58
RAB40C-204ENST00000538492 ACSL4O60488 711 aa24.9■■□□□ 1.58
RAB40C-204ENST00000538492 AOC2O75106 756 aa24.9■■□□□ 1.58
RAB40C-204ENST00000538492 RPL17P18621 184 aaKnown RBP24.9■■□□□ 1.58
RAB40C-204ENST00000538492 OR4D1Q15615 310 aa24.9■■□□□ 1.58
RAB40C-204ENST00000538492 CYHR1Q6ZMK1 362 aa24.9■■□□□ 1.58
RAB40C-204ENST00000538492 DENND1CQ8IV53 801 aa24.9■■□□□ 1.58
RAB40C-204ENST00000538492 BCL7CQ8WUZ0 217 aaPredicted RBP24.9■■□□□ 1.58
RAB40C-204ENST00000538492 L3HYPDHQ96EM0 354 aa24.9■■□□□ 1.58
RAB40C-204ENST00000538492 FBRSL1Q9HCM7 1045 aaKnown RBP24.9■■□□□ 1.58
RAB40C-204ENST00000538492 SPO11Q9Y5K1 396 aa24.9■■□□□ 1.58
RAB40C-204ENST00000538492 CAPN8A6NHC0 703 aa24.9■■□□□ 1.58
RAB40C-204ENST00000538492 H3BMM5 538 aa24.9■■□□□ 1.58
RAB40C-204ENST00000538492 UBXN8O00124 270 aa24.9■■□□□ 1.58
RAB40C-204ENST00000538492 SMIM24O75264 130 aa24.9■■□□□ 1.58
RAB40C-204ENST00000538492 EPOP01588 193 aa24.9■■□□□ 1.58
RAB40C-204ENST00000538492 ZNF37AP17032 561 aaPredicted RBP24.9■■□□□ 1.58
RAB40C-204ENST00000538492 ATP5C1P36542 298 aaKnown RBP24.9■■□□□ 1.58
RAB40C-204ENST00000538492 HERVK_113P63132 956 aa24.9■■□□□ 1.58
RAB40C-204ENST00000538492 GALNT1Q10472 559 aaPredicted RBP24.9■■□□□ 1.58
RAB40C-204ENST00000538492 PDAP1Q13442 181 aaKnown RBP24.9■■□□□ 1.58
RAB40C-204ENST00000538492 SQLEQ14534 574 aa24.9■■□□□ 1.58
RAB40C-204ENST00000538492 RFTN1Q14699 578 aaPredicted RBP24.9■■□□□ 1.58
RAB40C-204ENST00000538492 PTGR2Q8N8N7 351 aaPredicted RBP24.9■■□□□ 1.58
RAB40C-204ENST00000538492 OR9I1Q8NGQ6 314 aa24.9■■□□□ 1.58
RAB40C-204ENST00000538492 RMDN1Q96DB5 314 aa24.9■■□□□ 1.58
RAB40C-204ENST00000538492 ZNF512Q96ME7 567 aaPredicted RBP24.9■■□□□ 1.58
RAB40C-204ENST00000538492 ERVK-6Q9BXR3 956 aa24.9■■□□□ 1.58
RAB40C-204ENST00000538492 DNMT3LQ9UJW3 386 aa24.9■■□□□ 1.58
RAB40C-204ENST00000538492 CHD5Q8TDI0 1954 aa24.89■■□□□ 1.58
RAB40C-204ENST00000538492 COL6A1P12109 1028 aa24.89■■□□□ 1.58
RAB40C-204ENST00000538492 UQCRBP14927 111 aa24.89■■□□□ 1.58
RAB40C-204ENST00000538492 KPNA1P52294 538 aaPredicted RBP24.89■■□□□ 1.58
RAB40C-204ENST00000538492 GPR150Q8NGU9 434 aa24.89■■□□□ 1.58
RAB40C-204ENST00000538492 CD99L2Q8TCZ2 262 aa24.89■■□□□ 1.58
RAB40C-204ENST00000538492 CDKN2AIPNLQ96HQ2 116 aa24.89■■□□□ 1.58
RAB40C-204ENST00000538492 C3orf30Q96M34 536 aa24.89■■□□□ 1.58
RAB40C-204ENST00000538492 TRIB3Q96RU7 358 aa24.89■■□□□ 1.58
RAB40C-204ENST00000538492 NDST3O95803 873 aa24.89■■□□□ 1.57
RAB40C-204ENST00000538492 STC1P52823 247 aa24.89■■□□□ 1.57
RAB40C-204ENST00000538492 MED21Q13503 144 aa24.89■■□□□ 1.57
RAB40C-204ENST00000538492 PFKFB4Q16877 469 aa24.89■■□□□ 1.57
RAB40C-204ENST00000538492 SLC43A3Q8NBI5 491 aa24.89■■□□□ 1.57
RAB40C-204ENST00000538492 RAET1EQ8TD07 263 aa24.89■■□□□ 1.57
RAB40C-204ENST00000538492 TTPALQ9BTX7 342 aa24.89■■□□□ 1.57
RAB40C-204ENST00000538492 CINPQ9BW66 212 aaPredicted RBP24.89■■□□□ 1.57
RAB40C-204ENST00000538492 FAM50BQ9Y247 325 aa24.89■■□□□ 1.57
RAB40C-204ENST00000538492 PCDHGA7Q9Y5G6 932 aa24.89■■□□□ 1.57
RAB40C-204ENST00000538492 FBP2O00757 339 aa24.88■■□□□ 1.57
RAB40C-204ENST00000538492 TXNDC9O14530 226 aa24.88■■□□□ 1.57
RAB40C-204ENST00000538492 GALTP07902 379 aa24.88■■□□□ 1.57
RAB40C-204ENST00000538492 INHBCP55103 352 aa24.88■■□□□ 1.57
RAB40C-204ENST00000538492 PSME3P61289 254 aa24.88■■□□□ 1.57
RAB40C-204ENST00000538492 SH3BP2P78314 561 aa24.88■■□□□ 1.57
RAB40C-204ENST00000538492 TCTN1Q2MV58 587 aa24.88■■□□□ 1.57
RAB40C-204ENST00000538492 ACBD5Q5T8D3 534 aaPredicted RBP24.88■■□□□ 1.57
RAB40C-204ENST00000538492 OGFRL1Q5TC84 451 aaPredicted RBP24.88■■□□□ 1.57
RAB40C-204ENST00000538492 GCNAQ96QF7 691 aa24.88■■□□□ 1.57
RAB40C-204ENST00000538492 MGME1Q9BQP7 344 aa24.88■■□□□ 1.57
RAB40C-204ENST00000538492 TRMOQ9BU70 441 aa24.88■■□□□ 1.57
RAB40C-204ENST00000538492 MAGEH1Q9H213 219 aa24.88■■□□□ 1.57
RAB40C-204ENST00000538492 ELAC1Q9H777 363 aaKnown RBP24.88■■□□□ 1.57
RAB40C-204ENST00000538492 COPS7BQ9H9Q2 264 aaPredicted RBP24.88■■□□□ 1.57
RAB40C-204ENST00000538492 C6orf203Q9P0P8 240 aaPredicted RBP24.88■■□□□ 1.57
RAB40C-204ENST00000538492 PTGDR2Q9Y5Y4 395 aa24.88■■□□□ 1.57
RAB40C-204ENST00000538492 TBKBP1A7MCY6 615 aa24.88■■□□□ 1.57
RAB40C-204ENST00000538492 VCLP18206 1134 aa24.88■■□□□ 1.57
RAB40C-204ENST00000538492 SGSHP51688 502 aa24.88■■□□□ 1.57
RAB40C-204ENST00000538492 LAMB3Q13751 1172 aa24.88■■□□□ 1.57
RAB40C-204ENST00000538492 GEN1Q17RS7 908 aa24.88■■□□□ 1.57
RAB40C-204ENST00000538492 LHX8Q68G74 356 aa24.88■■□□□ 1.57
RAB40C-204ENST00000538492 REP15Q6BDI9 236 aa24.88■■□□□ 1.57
RAB40C-204ENST00000538492 BBS5Q8N3I7 341 aa24.88■■□□□ 1.57
RAB40C-204ENST00000538492 PEX13Q92968 403 aa24.88■■□□□ 1.57
RAB40C-204ENST00000538492 ZNF599Q96NL3 588 aa24.88■■□□□ 1.57
RAB40C-204ENST00000538492 CACNA2D2Q9NY47 1150 aa24.88■■□□□ 1.57
RAB40C-204ENST00000538492 UBA2Q9UBT2 640 aaPredicted RBP24.88■■□□□ 1.57
RAB40C-204ENST00000538492 SEPT3Q9UH03 358 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms