RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 FAR2Q96K12 515 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 EXOC2Q96KP1 924 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 MEAF6Q9HAF1 191 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 POPDC3Q9HBV1 291 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 S100A14Q9HCY8 104 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 AGO1Q9UL18 857 aaKnown RBP14.03□□□□□ -0.16
LIMK1-208ENST00000538333 AIM2O14862 343 aa14.02□□□□□ -0.16
LIMK1-208ENST00000538333 FKTNO75072 461 aa14.02□□□□□ -0.16
LIMK1-208ENST00000538333 UPP2O95045 317 aa14.02□□□□□ -0.16
LIMK1-208ENST00000538333 F11P03951 625 aa14.02□□□□□ -0.16
LIMK1-208ENST00000538333 RHOCP08134 193 aa14.02□□□□□ -0.16
LIMK1-208ENST00000538333 PRSS56P0CW18 603 aa14.02□□□□□ -0.16
LIMK1-208ENST00000538333 ZNF37AP17032 561 aaPredicted RBP14.02□□□□□ -0.16
LIMK1-208ENST00000538333 CDC25CP30307 473 aa14.02□□□□□ -0.16
LIMK1-208ENST00000538333 VEGFBP49765 207 aa14.02□□□□□ -0.16
LIMK1-208ENST00000538333 NUDT2P50583 147 aa14.02□□□□□ -0.16
LIMK1-208ENST00000538333 SCNN1BP51168 640 aa14.02□□□□□ -0.16
LIMK1-208ENST00000538333 C1QTNF8P60827 252 aa14.02□□□□□ -0.16
LIMK1-208ENST00000538333 DSG1Q02413 1049 aa14.02□□□□□ -0.16
LIMK1-208ENST00000538333 ZNF678Q5SXM1 525 aa14.02□□□□□ -0.16
LIMK1-208ENST00000538333 ADGRF1Q5T601 910 aa14.02□□□□□ -0.16
LIMK1-208ENST00000538333 ANO7Q6IWH7 933 aa14.02□□□□□ -0.16
LIMK1-208ENST00000538333 CXorf57Q6NSI4 855 aaKnown RBP14.02□□□□□ -0.16
LIMK1-208ENST00000538333 RNF111Q6ZNA4 994 aa14.02□□□□□ -0.16
LIMK1-208ENST00000538333 CHSY3Q70JA7 882 aa14.02□□□□□ -0.16
LIMK1-208ENST00000538333 KIRREL3Q8IZU9 778 aa14.02□□□□□ -0.16
LIMK1-208ENST00000538333 EFCAB3Q8N7B9 438 aa14.02□□□□□ -0.16
LIMK1-208ENST00000538333 CEP70Q8NHQ1 597 aa14.02□□□□□ -0.16
LIMK1-208ENST00000538333 JADE3Q92613 823 aa14.02□□□□□ -0.16
LIMK1-208ENST00000538333 FAM136AQ96C01 138 aa14.02□□□□□ -0.16
LIMK1-208ENST00000538333 CCDC124Q96CT7 223 aaKnown RBP14.02□□□□□ -0.16
LIMK1-208ENST00000538333 MARK4Q96L34 752 aa14.02□□□□□ -0.16
LIMK1-208ENST00000538333 TTC1Q99614 292 aa14.02□□□□□ -0.16
LIMK1-208ENST00000538333 AARSD1Q9BTE6 412 aaKnown RBP14.02□□□□□ -0.16
LIMK1-208ENST00000538333 KLF16Q9BXK1 252 aaPredicted RBP14.02□□□□□ -0.16
LIMK1-208ENST00000538333 TDRD1Q9BXT4 1180 aaKnown RBP14.02□□□□□ -0.16
LIMK1-208ENST00000538333 EML4Q9HC35 981 aaKnown RBP14.02□□□□□ -0.16
LIMK1-208ENST00000538333 PAK6Q9NQU5 681 aaPredicted RBP14.02□□□□□ -0.16
LIMK1-208ENST00000538333 TRPM5Q9NZQ8 1165 aa14.02□□□□□ -0.16
LIMK1-208ENST00000538333 ARIH1Q9Y4X5 557 aaPredicted RBP14.02□□□□□ -0.16
LIMK1-208ENST00000538333 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.02□□□□□ -0.17
LIMK1-208ENST00000538333 C2orf78A6NCI8 922 aa14.02□□□□□ -0.17
LIMK1-208ENST00000538333 UBFD1O14562 309 aaKnown RBP14.02□□□□□ -0.17
LIMK1-208ENST00000538333 CRTAMO95727 393 aa14.02□□□□□ -0.17
LIMK1-208ENST00000538333 CD160O95971 181 aa14.02□□□□□ -0.17
LIMK1-208ENST00000538333 SLC4A1P02730 911 aa14.02□□□□□ -0.17
LIMK1-208ENST00000538333 INHBCP55103 352 aa14.02□□□□□ -0.17
LIMK1-208ENST00000538333 ZNF177Q13360 481 aaPredicted RBP14.02□□□□□ -0.17
LIMK1-208ENST00000538333 BLMHQ13867 455 aa14.02□□□□□ -0.17
LIMK1-208ENST00000538333 TCHHL1Q5QJ38 904 aaPredicted RBP14.02□□□□□ -0.17
LIMK1-208ENST00000538333 DEFB128Q7Z7B8 93 aa14.02□□□□□ -0.17
LIMK1-208ENST00000538333 DSELQ8IZU8 1212 aa14.02□□□□□ -0.17
LIMK1-208ENST00000538333 KYQ8NBH2 561 aa14.02□□□□□ -0.17
LIMK1-208ENST00000538333 PPFIBP2Q8ND30 876 aa14.02□□□□□ -0.17
LIMK1-208ENST00000538333 MDGA1Q8NFP4 955 aa14.02□□□□□ -0.17
LIMK1-208ENST00000538333 TRMT2BQ96GJ1 504 aaKnown RBP14.02□□□□□ -0.17
LIMK1-208ENST00000538333 TRMOQ9BU70 441 aa14.02□□□□□ -0.17
LIMK1-208ENST00000538333 INTS10Q9NVR2 710 aaKnown RBP14.02□□□□□ -0.17
LIMK1-208ENST00000538333 NDE1Q9NXR1 346 aa14.02□□□□□ -0.17
LIMK1-208ENST00000538333 PRPF19Q9UMS4 504 aaKnown RBP14.02□□□□□ -0.17
LIMK1-208ENST00000538333 MED16Q9Y2X0 877 aa14.02□□□□□ -0.17
LIMK1-208ENST00000538333 YIPF1Q9Y548 306 aa14.02□□□□□ -0.17
LIMK1-208ENST00000538333 OBSL1O75147 1896 aa14.01□□□□□ -0.17
LIMK1-208ENST00000538333 LIN7AO14910 233 aaPredicted RBP14.01□□□□□ -0.17
LIMK1-208ENST00000538333 SKAP2O75563 359 aaPredicted RBP14.01□□□□□ -0.17
LIMK1-208ENST00000538333 PDHA1P08559 390 aa14.01□□□□□ -0.17
LIMK1-208ENST00000538333 HSPA1AP0DMV8 641 aaKnown RBP14.01□□□□□ -0.17
LIMK1-208ENST00000538333 HSPA1BP0DMV9 641 aaKnown RBP14.01□□□□□ -0.17
LIMK1-208ENST00000538333 ARF5P84085 180 aa14.01□□□□□ -0.17
LIMK1-208ENST00000538333 TAF1AQ15573 450 aaPredicted RBP14.01□□□□□ -0.17
LIMK1-208ENST00000538333 KIAA1841Q6NSI8 718 aa14.01□□□□□ -0.17
LIMK1-208ENST00000538333 CYHR1Q6ZMK1 362 aa14.01□□□□□ -0.17
LIMK1-208ENST00000538333 PYDC1Q8WXC3 89 aa14.01□□□□□ -0.17
LIMK1-208ENST00000538333 RCN3Q96D15 328 aa14.01□□□□□ -0.17
LIMK1-208ENST00000538333 PPP1R12CQ9BZL4 782 aa14.01□□□□□ -0.17
LIMK1-208ENST00000538333 STOML2Q9UJZ1 356 aa14.01□□□□□ -0.17
LIMK1-208ENST00000538333 VPS28Q9UK41 221 aa14.01□□□□□ -0.17
LIMK1-208ENST00000538333 H3BMM5 538 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 MAP3K7O43318 606 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 PARNO95453 639 aaKnown RBP14□□□□□ -0.17
LIMK1-208ENST00000538333 SOD2P04179 222 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 MTHFD2P13995 350 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 HERVK_113P63132 956 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 PLD1Q13393 1074 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 SETMARQ53H47 684 aaPredicted RBP14□□□□□ -0.17
LIMK1-208ENST00000538333 UNC50Q53HI1 259 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 TPGS2Q68CL5 300 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 C16orf89Q6UX73 402 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 ANKRD33Q7Z3H0 272 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 GLT6D1Q7Z4J2 308 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 SDCCAG8Q86SQ7 713 aaPredicted RBP14□□□□□ -0.17
LIMK1-208ENST00000538333 OR4K2Q8NGD2 314 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 HMGCLL1Q8TB92 370 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 LPGAT1Q92604 370 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 VWCEQ96DN2 955 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 SMIM14Q96QK8 99 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 ZNF184Q99676 751 aaPredicted RBP14□□□□□ -0.17
LIMK1-208ENST00000538333 ZBED2Q9BTP6 218 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 ERVK-6Q9BXR3 956 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 CXorf56Q9H5V9 222 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms