RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 SCAMP1O15126 338 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 TNFSF14O43557 240 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 LZTS3O60299 673 aaPredicted RBP8.41□□□□□ -1.06
SPARC-208ENST00000538026 MAGEC1O60732 1142 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 FTCDO95954 541 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 MT-CYBP00156 380 aaPredicted RBP8.41□□□□□ -1.06
SPARC-208ENST00000538026 PCCBP05166 539 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 ELFN1P0C7U0 828 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 ZFXP17010 805 aaPredicted RBP8.41□□□□□ -1.06
SPARC-208ENST00000538026 JUNDP17535 347 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 TGM2P21980 687 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 XPAP23025 273 aaPredicted RBP8.41□□□□□ -1.06
SPARC-208ENST00000538026 NR2C2P49116 596 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 ARRB1P49407 418 aaPredicted RBP8.41□□□□□ -1.06
SPARC-208ENST00000538026 ACADVLP49748 655 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 STC1P52823 247 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 YPEL5P62699 121 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 POLR2LP62875 67 aaKnown RBP8.41□□□□□ -1.06
SPARC-208ENST00000538026 ZNF211Q13398 564 aaPredicted RBP8.41□□□□□ -1.06
SPARC-208ENST00000538026 C1orf61Q13536 156 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 SUZ12Q15022 739 aaKnown RBP8.41□□□□□ -1.06
SPARC-208ENST00000538026 NOMO1Q15155 1222 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 LRRC66Q68CR7 880 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 ESRP1Q6NXG1 681 aaKnown RBP8.41□□□□□ -1.06
SPARC-208ENST00000538026 ERAP2Q6P179 960 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 PNCKQ6P2M8 343 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 KDELC1Q6UW63 502 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 ZC3H18Q86VM9 953 aaKnown RBP8.41□□□□□ -1.06
SPARC-208ENST00000538026 PARGQ86W56 976 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 DCP2Q8IU60 420 aaKnown RBP8.41□□□□□ -1.06
SPARC-208ENST00000538026 ZNF567Q8N184 647 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 OXR1Q8N573 874 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 ZNF548Q8NEK5 533 aaPredicted RBP8.41□□□□□ -1.06
SPARC-208ENST00000538026 FAM174AQ8TBP5 190 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 KIAA1524Q8TCG1 905 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 NSMCE1Q8WV22 266 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 OR1E3Q8WZA6 343 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 GATA6Q92908 595 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 SCAMP4Q969E2 229 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 OXNAD1Q96HP4 312 aaPredicted RBP8.41□□□□□ -1.06
SPARC-208ENST00000538026 CNDP2Q96KP4 475 aaKnown RBP8.41□□□□□ -1.06
SPARC-208ENST00000538026 LYSMD1Q96S90 227 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 RBM15Q96T37 977 aaKnown RBP eCLIP8.41□□□□□ -1.06
SPARC-208ENST00000538026 CDC6Q99741 560 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 LRRC61Q9BV99 259 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 OSBPL8Q9BZF1 889 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 SLC25A51Q9H1U9 297 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 ABCG8Q9H221 673 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 USP29Q9HBJ7 922 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 GLOD4Q9HC38 313 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 PCDH9Q9HC56 1237 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 FGF22Q9HCT0 170 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 MRPL40Q9NQ50 206 aaKnown RBP8.41□□□□□ -1.06
SPARC-208ENST00000538026 DNAJC28Q9NX36 388 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 CNOT6Q9ULM6 557 aaKnown RBP8.41□□□□□ -1.06
SPARC-208ENST00000538026 R3HDM2Q9Y2K5 976 aaKnown RBP8.41□□□□□ -1.06
SPARC-208ENST00000538026 BOD1L1Q8NFC6 3051 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 AHCTF1Q8WYP5 2266 aa8.41□□□□□ -1.06
SPARC-208ENST00000538026 A0A1W2PQ67 120 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 C1QTNF9BB2RNN3 333 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 ANKRD66B4E2M5 251 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 AURKAO14965 403 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 YKT6O15498 198 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 FFAR2O15552 330 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 CLDN7O95471 211 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 LDOC1O95751 146 aaPredicted RBP8.4□□□□□ -1.06
SPARC-208ENST00000538026 CEACAM5P06731 702 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 HOXC4P09017 264 aaPredicted RBP8.4□□□□□ -1.06
SPARC-208ENST00000538026 PIRTP0C851 137 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 C1QTNF9P0C862 333 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 TSHRP16473 764 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 CES1P23141 567 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 RBL1P28749 1068 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 CA5AP35218 305 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 PTPN7P35236 360 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 POLD2P49005 469 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 KLF1Q13351 362 aaPredicted RBP8.4□□□□□ -1.06
SPARC-208ENST00000538026 MTM1Q13496 603 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 OLIG2Q13516 323 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 CAMK2BQ13554 666 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 TFDP2Q14188 446 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 GALNT3Q14435 633 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 NFATC4Q14934 902 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 ACOX1Q15067 660 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 TCEA2Q15560 299 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 CFAP58Q5T655 872 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 DENND2CQ68D51 928 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 DHRS13Q6UX07 377 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 CCNI2Q6ZMN8 369 aaPredicted RBP8.4□□□□□ -1.06
SPARC-208ENST00000538026 MACC1Q6ZN28 852 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 KDELC2Q7Z4H8 507 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 KIAA1328Q86T90 577 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 LRRC8AQ8IWT6 810 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 PHACTR4Q8IZ21 702 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 BBS5Q8N3I7 341 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 OR4C6Q8NH72 309 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 CCL4L1Q8NHW4 92 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 ACTL9Q8TC94 416 aa8.4□□□□□ -1.06
SPARC-208ENST00000538026 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.4□□□□□ -1.06
SPARC-208ENST00000538026 PDXPQ96GD0 296 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms