RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 SPRED1Q7Z699 444 aa10.71□□□□□ -0.69
RTN3-208ENST00000537981 EID3Q8N140 333 aa10.71□□□□□ -0.69
RTN3-208ENST00000537981 SFRP1Q8N474 314 aa10.71□□□□□ -0.69
RTN3-208ENST00000537981 RHOXF1Q8NHV9 184 aa10.71□□□□□ -0.69
RTN3-208ENST00000537981 TBC1D20Q96BZ9 403 aa10.71□□□□□ -0.69
RTN3-208ENST00000537981 ITCHQ96J02 903 aa10.71□□□□□ -0.69
RTN3-208ENST00000537981 BTN2A3PQ96KV6 586 aa10.71□□□□□ -0.69
RTN3-208ENST00000537981 AGAP4Q96P64 663 aa10.71□□□□□ -0.69
RTN3-208ENST00000537981 NEDD4LQ96PU5 975 aa10.71□□□□□ -0.69
RTN3-208ENST00000537981 EBNA1BP2Q99848 306 aaKnown RBP10.71□□□□□ -0.69
RTN3-208ENST00000537981 GDF15Q99988 308 aa10.71□□□□□ -0.69
RTN3-208ENST00000537981 LXNQ9BS40 222 aa10.71□□□□□ -0.69
RTN3-208ENST00000537981 RHNO1Q9BSD3 238 aa10.71□□□□□ -0.69
RTN3-208ENST00000537981 SLIRPQ9GZT3 109 aaKnown RBP10.71□□□□□ -0.69
RTN3-208ENST00000537981 TNKS2Q9H2K2 1166 aa10.71□□□□□ -0.69
RTN3-208ENST00000537981 RSAD1Q9HA92 442 aa10.71□□□□□ -0.69
RTN3-208ENST00000537981 CCM2LQ9NUG4 571 aaPredicted RBP10.71□□□□□ -0.69
RTN3-208ENST00000537981 TP53BP1Q12888 1972 aaPredicted RBP10.71□□□□□ -0.7
RTN3-208ENST00000537981 IGLV3-22A0A075B6J6 115 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 A0A0U1RQS6 177 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 DHRS12A0PJE2 317 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 M0R3G1 203 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 NME4O00746 187 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 TRDMT1O14717 391 aaKnown RBP10.71□□□□□ -0.7
RTN3-208ENST00000537981 SLC22A1O15245 554 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 CHADO15335 359 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 TSPAN1O60635 241 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 CPNE3O75131 537 aaKnown RBP10.71□□□□□ -0.7
RTN3-208ENST00000537981 PGRP06401 933 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 ATF4P18848 351 aaPredicted RBP10.71□□□□□ -0.7
RTN3-208ENST00000537981 GPD2P43304 727 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 MAP2K4P45985 399 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 CRKLP46109 303 aaKnown RBP10.71□□□□□ -0.7
RTN3-208ENST00000537981 DGCR6Q14129 220 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 CAPRIN1Q14444 709 aaKnown RBP10.71□□□□□ -0.7
RTN3-208ENST00000537981 SNX17Q15036 470 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 DUSP7Q16829 419 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 ZBTB41Q5SVQ8 909 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 BSPRYQ5W0U4 402 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 RAP1GAP2Q684P5 730 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 SYTL1Q8IYJ3 562 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 OR4M1Q8NGD0 313 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 DYNC2LI1Q8TCX1 351 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 S100ZQ8WXG8 99 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 SLC7A3Q8WY07 619 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 SNAPC3Q92966 411 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 AKT1S1Q96B36 256 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 RNF170Q96K19 258 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 SNX18Q96RF0 628 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 PEBP4Q96S96 227 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 SERINC2Q96SA4 455 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 KCTD14Q9BQ13 255 aaPredicted RBP10.71□□□□□ -0.7
RTN3-208ENST00000537981 MCMBPQ9BTE3 642 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 ZSCAN5AQ9BUG6 496 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 CCDC90BQ9GZT6 254 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 RPRD1BQ9NQG5 326 aaKnown RBP10.71□□□□□ -0.7
RTN3-208ENST00000537981 SNX15Q9NRS6 342 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 TMEM39AQ9NV64 488 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 MOCS1Q9NZB8 636 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 PCDHB3Q9Y5E6 796 aa10.71□□□□□ -0.7
RTN3-208ENST00000537981 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.7□□□□□ -0.7
RTN3-208ENST00000537981 CCDC78A2IDD5 438 aa10.7□□□□□ -0.7
RTN3-208ENST00000537981 APOC4-APOC2K7ER74 178 aa10.7□□□□□ -0.7
RTN3-208ENST00000537981 EXTL3O43909 919 aa10.7□□□□□ -0.7
RTN3-208ENST00000537981 SEMA3DO95025 777 aa10.7□□□□□ -0.7
RTN3-208ENST00000537981 NDST3O95803 873 aa10.7□□□□□ -0.7
RTN3-208ENST00000537981 APOC2P02655 101 aa10.7□□□□□ -0.7
RTN3-208ENST00000537981 GSNP06396 782 aa10.7□□□□□ -0.7
RTN3-208ENST00000537981 PSMA2P25787 234 aa10.7□□□□□ -0.7
RTN3-208ENST00000537981 GSTM2P28161 218 aa10.7□□□□□ -0.7
RTN3-208ENST00000537981 RRM2P31350 389 aa10.7□□□□□ -0.7
RTN3-208ENST00000537981 HTR3AP46098 478 aa10.7□□□□□ -0.7
RTN3-208ENST00000537981 GRIA4P48058 902 aa10.7□□□□□ -0.7
RTN3-208ENST00000537981 HCAR3P49019 387 aa10.7□□□□□ -0.7
RTN3-208ENST00000537981 RPL14P50914 215 aaKnown RBP10.7□□□□□ -0.7
RTN3-208ENST00000537981 PPP5CP53041 499 aa10.7□□□□□ -0.7
RTN3-208ENST00000537981 NAGLUP54802 743 aa10.7□□□□□ -0.7
RTN3-208ENST00000537981 GALNT1Q10472 559 aaPredicted RBP10.7□□□□□ -0.7
RTN3-208ENST00000537981 BST2Q10589 180 aaKnown RBP10.7□□□□□ -0.7
RTN3-208ENST00000537981 BNIP2Q12982 314 aa10.7□□□□□ -0.7
RTN3-208ENST00000537981 AASDHQ4L235 1098 aaPredicted RBP10.7□□□□□ -0.7
RTN3-208ENST00000537981 AGKQ53H12 422 aa10.7□□□□□ -0.7
RTN3-208ENST00000537981 PADI6Q6TGC4 694 aa10.7□□□□□ -0.7
RTN3-208ENST00000537981 AGMOQ6ZNB7 445 aa10.7□□□□□ -0.7
RTN3-208ENST00000537981 IDO2Q6ZQW0 420 aa10.7□□□□□ -0.7
RTN3-208ENST00000537981 ZNF598Q86UK7 904 aaKnown RBP10.7□□□□□ -0.7
RTN3-208ENST00000537981 SPATA6LQ8N4H0 392 aa10.7□□□□□ -0.7
RTN3-208ENST00000537981 KCTD6Q8NC69 237 aa10.7□□□□□ -0.7
RTN3-208ENST00000537981 OR13J1Q8NGT2 312 aa10.7□□□□□ -0.7
RTN3-208ENST00000537981 GTF2H4Q92759 462 aa10.7□□□□□ -0.7
RTN3-208ENST00000537981 MUL1Q969V5 352 aa10.7□□□□□ -0.7
RTN3-208ENST00000537981 RMDN1Q96DB5 314 aa10.7□□□□□ -0.7
RTN3-208ENST00000537981 MFSD3Q96ES6 412 aa10.7□□□□□ -0.7
RTN3-208ENST00000537981 DUS3LQ96G46 650 aaKnown RBP10.7□□□□□ -0.7
RTN3-208ENST00000537981 ILKAPQ9H0C8 392 aaPredicted RBP10.7□□□□□ -0.7
RTN3-208ENST00000537981 ING2Q9H160 280 aa10.7□□□□□ -0.7
RTN3-208ENST00000537981 FAM96AQ9H5X1 160 aa10.7□□□□□ -0.7
RTN3-208ENST00000537981 SPAG4Q9NPE6 437 aa10.7□□□□□ -0.7
RTN3-208ENST00000537981 C1orf112Q9NSG2 853 aa10.7□□□□□ -0.7
RTN3-208ENST00000537981 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms