RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 CEP295NLQ96MC4 621 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 LGALS13Q9UHV8 139 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 C2orf81A6NN90 581 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 PPEF1O14829 653 aaPredicted RBP5.67□□□□□ -1.5
CSMD1-215ENST00000537824 HMGCRP04035 888 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 RNF44Q7L0R7 432 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 DNAJB7Q7Z6W7 309 aaPredicted RBP5.67□□□□□ -1.5
CSMD1-215ENST00000537824 GPR65Q8IYL9 337 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 DAW1Q8N136 415 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 ZNF433Q8N7K0 673 aaPredicted RBP5.67□□□□□ -1.5
CSMD1-215ENST00000537824 PWWP2AQ96N64 755 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 FANCFQ9NPI8 374 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 GGA3Q9NZ52 723 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 EIF2B4Q9UI10 523 aaKnown RBP5.67□□□□□ -1.5
CSMD1-215ENST00000537824 TSPAN8P19075 237 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 FUT4P22083 530 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 F8A1P23610 371 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 RBL1P28749 1068 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 IL6STP40189 918 aaPredicted RBP5.67□□□□□ -1.5
CSMD1-215ENST00000537824 SNRPFP62306 86 aaKnown RBP5.67□□□□□ -1.5
CSMD1-215ENST00000537824 LIPEQ05469 1076 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 FAM76BQ5HYJ3 339 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 U3KQV3 271 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 PXDNLA1KZ92 1463 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 FAM86B1E9PN63 330 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 K7EPI3 171 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 LIASO43766 372 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 BMP6P22004 513 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 TAF13Q15543 124 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 UAP1L1Q3KQV9 507 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 PIK3R6Q5UE93 754 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 GPRIN3Q6ZVF9 776 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 SSX6Q7RTT6 188 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 AADATQ8N5Z0 425 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 NAT16Q8N8M0 369 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 ZFP3Q96NJ6 502 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 SENP6Q9GZR1 1112 aaPredicted RBP5.67□□□□□ -1.5
CSMD1-215ENST00000537824 CISHQ9NSE2 258 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 CRYL1Q9Y2S2 319 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 PLLPQ9Y342 182 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 PCDHA10Q9Y5I2 948 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 FADS2P1A8MWK0 482 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 BTN3A1O00481 513 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 CALCAP01258 141 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 CD36P16671 472 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 STT3AP46977 705 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 GABRB2P47870 512 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 OXCT1P55809 520 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 ARHGEF6Q15052 776 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 DDX53Q86TM3 631 aaKnown RBP5.67□□□□□ -1.5
CSMD1-215ENST00000537824 TAS1R2Q8TE23 839 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 TTYH2Q9BSA4 534 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 BHLHE41Q9C0J9 482 aaPredicted RBP5.67□□□□□ -1.5
CSMD1-215ENST00000537824 C12orf65Q9H3J6 166 aaKnown RBP5.67□□□□□ -1.5
CSMD1-215ENST00000537824 AGPSO00116 658 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 PTPN1P18031 435 aaKnown RBP5.67□□□□□ -1.5
CSMD1-215ENST00000537824 PSMB4P28070 264 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 PRDX6P30041 224 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 SLC15A1P46059 708 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 GIT2Q14161 759 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 STARD3Q14849 445 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 ATF7IP2Q5U623 682 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 UBR7Q8N806 425 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 FCGR1BQ92637 280 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 HEPHQ9BQS7 1158 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 SLC30A2Q9BRI3 323 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 KLHL28Q9NXS3 571 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 PADI2Q9Y2J8 665 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 PCDHA11Q9Y5I1 949 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 FRMPD1Q5SYB0 1578 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 TCRBV9S1A1TA0A576 114 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 PLEKHG3A1L390 1219 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 E9PAM4 449 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 CD2P06729 351 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 MYL3P08590 195 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 XRCC1P18887 633 aaPredicted RBP5.67□□□□□ -1.5
CSMD1-215ENST00000537824 MAD2L1Q13257 205 aaPredicted RBP5.67□□□□□ -1.5
CSMD1-215ENST00000537824 SNX20Q7Z614 316 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 LEMD2Q8NC56 503 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 ZFP14Q9HCL3 533 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 CLUHO75153 1309 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 LCN1P31025 176 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 CRKLP46109 303 aaKnown RBP5.67□□□□□ -1.5
CSMD1-215ENST00000537824 ALDH3A2P51648 485 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 LSAMPQ13449 338 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 TGFBIQ15582 683 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 ANKS6Q68DC2 871 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 CLEC10AQ8IUN9 316 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 CNTD1Q8N815 330 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 RAVER2Q9HCJ3 691 aaKnown RBP5.67□□□□□ -1.5
CSMD1-215ENST00000537824 ACSS2Q9NR19 701 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 TBC1D13Q9NVG8 400 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 ZNF99A8MXY4 864 aaPredicted RBP5.67□□□□□ -1.5
CSMD1-215ENST00000537824 RPN2P04844 631 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 ARHGEF7Q14155 803 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 PGAM4Q8N0Y7 254 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 SPATA6LQ8N4H0 392 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 PCDHB8Q9UN66 801 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 KCNE2Q9Y6J6 123 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 RIMS1Q86UR5 1692 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms