RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 CSPG4P5Q96PW8 444 aa9.7□□□□□ -0.86
CHD4-207ENST00000537634 NUDCD1Q96RS6 583 aa9.7□□□□□ -0.86
CHD4-207ENST00000537634 MGME1Q9BQP7 344 aa9.7□□□□□ -0.86
CHD4-207ENST00000537634 LGR4Q9BXB1 951 aa9.7□□□□□ -0.86
CHD4-207ENST00000537634 TMEM168Q9H0V1 697 aa9.7□□□□□ -0.86
CHD4-207ENST00000537634 ISCUQ9H1K1 167 aa9.7□□□□□ -0.86
CHD4-207ENST00000537634 SUDS3Q9H7L9 328 aaPredicted RBP9.7□□□□□ -0.86
CHD4-207ENST00000537634 PHPT1Q9NRX4 125 aaPredicted RBP9.7□□□□□ -0.86
CHD4-207ENST00000537634 GOLGA6AQ9NYA3 693 aa9.7□□□□□ -0.86
CHD4-207ENST00000537634 APPL1Q9UKG1 709 aa9.7□□□□□ -0.86
CHD4-207ENST00000537634 PCDHGC4Q9Y5F7 938 aa9.7□□□□□ -0.86
CHD4-207ENST00000537634 TTC24A2A3L6 582 aaPredicted RBP9.69□□□□□ -0.86
CHD4-207ENST00000537634 K7ENP7 123 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 HTRA2O43464 458 aaPredicted RBP9.69□□□□□ -0.86
CHD4-207ENST00000537634 NUDT21O43809 227 aaKnown RBP9.69□□□□□ -0.86
CHD4-207ENST00000537634 NOBOXO60393 691 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 MAFKO60675 156 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 HEXIM1O94992 359 aaKnown RBP9.69□□□□□ -0.86
CHD4-207ENST00000537634 RARAP10276 462 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 TCF4P15884 667 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 PNLIPP16233 465 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 CR2P20023 1033 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 SLC5A2P31639 672 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 MMP13P45452 471 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 CDH6P55285 790 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 MAXP61244 160 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 BPTFQ12830 3046 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 ILF3Q12906 894 aaKnown RBP eCLIP9.69□□□□□ -0.86
CHD4-207ENST00000537634 TRAF2Q12933 501 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 CLN3Q13286 438 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 BIRC2Q13490 618 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 KRT81Q14533 505 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 MAP9Q49MG5 647 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 RALGPS1Q5JS13 557 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 MARC1Q5VT66 337 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 CAVIN1Q6NZI2 390 aaKnown RBP9.69□□□□□ -0.86
CHD4-207ENST00000537634 INO80CQ6PI98 192 aaPredicted RBP9.69□□□□□ -0.86
CHD4-207ENST00000537634 OGFOD3Q6PK18 319 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 USP45Q70EL2 814 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 SPRED1Q7Z699 444 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 ZNF605Q86T29 641 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 HEATR4Q86WZ0 1026 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 PELI3Q8N2H9 469 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 PGBD5Q8N414 524 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 UNC13CQ8NB66 2214 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 CCL4L1Q8NHW4 92 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 TEKT4Q8WW24 435 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 DTD2Q96FN9 168 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 NAP1L5Q96NT1 182 aaPredicted RBP9.69□□□□□ -0.86
CHD4-207ENST00000537634 CCNL2Q96S94 520 aaPredicted RBP9.69□□□□□ -0.86
CHD4-207ENST00000537634 GSDMCQ9BYG8 508 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 CARS2Q9HA77 564 aaKnown RBP9.69□□□□□ -0.86
CHD4-207ENST00000537634 NOD2Q9HC29 1040 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 ETNK2Q9NVF9 386 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 LRIT1Q9P2V4 623 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 PISDQ9UG56 409 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 ANAPC7Q9UJX3 599 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 ATXN7L1Q9ULK2 861 aaPredicted RBP9.69□□□□□ -0.86
CHD4-207ENST00000537634 PHTF1Q9UMS5 762 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 SCN8AQ9UQD0 1980 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 SSUH2Q9Y2M2 353 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 LOXL2Q9Y4K0 774 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 PCDHGA7Q9Y5G6 932 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 BZW2Q9Y6E2 419 aaKnown RBP9.69□□□□□ -0.86
CHD4-207ENST00000537634 RNF215Q9Y6U7 377 aa9.69□□□□□ -0.86
CHD4-207ENST00000537634 NPIPB15A6NHN6 443 aaPredicted RBP9.68□□□□□ -0.86
CHD4-207ENST00000537634 PSMD11O00231 422 aa9.68□□□□□ -0.86
CHD4-207ENST00000537634 PGLSO95336 258 aa9.68□□□□□ -0.86
CHD4-207ENST00000537634 PEX11BO96011 259 aa9.68□□□□□ -0.86
CHD4-207ENST00000537634 KRT10P13645 584 aa9.68□□□□□ -0.86
CHD4-207ENST00000537634 HGFP14210 728 aa9.68□□□□□ -0.86
CHD4-207ENST00000537634 PLA2G2AP14555 144 aa9.68□□□□□ -0.86
CHD4-207ENST00000537634 CCNB1P14635 433 aa9.68□□□□□ -0.86
CHD4-207ENST00000537634 ETV3P41162 512 aa9.68□□□□□ -0.86
CHD4-207ENST00000537634 SSR1P43307 286 aaKnown RBP9.68□□□□□ -0.86
CHD4-207ENST00000537634 GNPDA1P46926 289 aa9.68□□□□□ -0.86
CHD4-207ENST00000537634 TPM4P67936 248 aa9.68□□□□□ -0.86
CHD4-207ENST00000537634 CDK3Q00526 305 aa9.68□□□□□ -0.86
CHD4-207ENST00000537634 HLTFQ14527 1009 aaKnown RBP eCLIP9.68□□□□□ -0.86
CHD4-207ENST00000537634 NR1I3Q14994 352 aa9.68□□□□□ -0.86
CHD4-207ENST00000537634 FIGNQ5HY92 759 aa9.68□□□□□ -0.86
CHD4-207ENST00000537634 PHF19Q5T6S3 580 aa9.68□□□□□ -0.86
CHD4-207ENST00000537634 ARMC12Q5T9G4 340 aa9.68□□□□□ -0.86
CHD4-207ENST00000537634 RAET1GQ6H3X3 334 aa9.68□□□□□ -0.86
CHD4-207ENST00000537634 HSD11B1LQ7Z5J1 315 aa9.68□□□□□ -0.86
CHD4-207ENST00000537634 SFTPA2Q8IWL1 248 aa9.68□□□□□ -0.86
CHD4-207ENST00000537634 NDUFAF2Q8N183 169 aa9.68□□□□□ -0.86
CHD4-207ENST00000537634 NIPA2Q8N8Q9 360 aa9.68□□□□□ -0.86
CHD4-207ENST00000537634 TTC9Q92623 222 aa9.68□□□□□ -0.86
CHD4-207ENST00000537634 TMEM159Q96B96 161 aa9.68□□□□□ -0.86
CHD4-207ENST00000537634 CMKLR1Q99788 373 aa9.68□□□□□ -0.86
CHD4-207ENST00000537634 NUP85Q9BW27 656 aa9.68□□□□□ -0.86
CHD4-207ENST00000537634 TEX101Q9BY14 249 aa9.68□□□□□ -0.86
CHD4-207ENST00000537634 THAP2Q9H0W7 228 aa9.68□□□□□ -0.86
CHD4-207ENST00000537634 PCDH18Q9HCL0 1135 aa9.68□□□□□ -0.86
CHD4-207ENST00000537634 NT5MQ9NPB1 228 aa9.68□□□□□ -0.86
CHD4-207ENST00000537634 IP6K2Q9UHH9 426 aa9.68□□□□□ -0.86
CHD4-207ENST00000537634 ARHGEF17Q96PE2 2063 aaPredicted RBP9.68□□□□□ -0.86
CHD4-207ENST00000537634 GCN1Q92616 2671 aaKnown RBP9.68□□□□□ -0.86
CHD4-207ENST00000537634 A0A1W2PQJ5 194 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms