RNA–Protein interactions for RNA: ENST00000537275.5

HMGA2-207, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,508 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-207ENST00000537275 KIFC1Q9BW19 673 aa24.25■■□□□ 1.47
HMGA2-207ENST00000537275 TCAF1Q9Y4C2 921 aa24.25■■□□□ 1.47
HMGA2-207ENST00000537275 TEX264Q9Y6I9 313 aa24.25■■□□□ 1.47
HMGA2-207ENST00000537275 PLXND1Q9Y4D7 1925 aa24.25■■□□□ 1.47
HMGA2-207ENST00000537275 TBC1D3DA0A087WVF3 549 aa24.25■■□□□ 1.47
HMGA2-207ENST00000537275 TBC1D3IA0A087WXS9 549 aa24.25■■□□□ 1.47
HMGA2-207ENST00000537275 TBC1D3EA0A087X179 549 aa24.25■■□□□ 1.47
HMGA2-207ENST00000537275 TBC1D3KA0A087X1G2 549 aa24.25■■□□□ 1.47
HMGA2-207ENST00000537275 MAGEB16A2A368 324 aa24.25■■□□□ 1.47
HMGA2-207ENST00000537275 TBC1D3FA6NER0 549 aaPredicted RBP24.25■■□□□ 1.47
HMGA2-207ENST00000537275 TBC1D3LB9A6J9 549 aa24.25■■□□□ 1.47
HMGA2-207ENST00000537275 MMP20O60882 483 aa24.25■■□□□ 1.47
HMGA2-207ENST00000537275 SEMA4FO95754 770 aa24.25■■□□□ 1.47
HMGA2-207ENST00000537275 C1SP09871 688 aa24.25■■□□□ 1.47
HMGA2-207ENST00000537275 TBC1D3HP0C7X1 549 aa24.25■■□□□ 1.47
HMGA2-207ENST00000537275 MYBL2P10244 700 aa24.25■■□□□ 1.47
HMGA2-207ENST00000537275 LPOP22079 712 aaPredicted RBP24.25■■□□□ 1.47
HMGA2-207ENST00000537275 PDE1BQ01064 536 aa24.25■■□□□ 1.47
HMGA2-207ENST00000537275 LAMB3Q13751 1172 aa24.25■■□□□ 1.47
HMGA2-207ENST00000537275 SEPT6Q14141 434 aa24.25■■□□□ 1.47
HMGA2-207ENST00000537275 ANGPT1Q15389 498 aa24.25■■□□□ 1.47
HMGA2-207ENST00000537275 TBC1D3GQ6DHY5 549 aa24.25■■□□□ 1.47
HMGA2-207ENST00000537275 TBC1D3CQ6IPX1 549 aa24.25■■□□□ 1.47
HMGA2-207ENST00000537275 LONP2Q86WA8 852 aa24.25■■□□□ 1.47
HMGA2-207ENST00000537275 TBC1D3Q8IZP1 549 aaPredicted RBP24.25■■□□□ 1.47
HMGA2-207ENST00000537275 PPHLN1Q8NEY8 458 aaKnown RBP24.25■■□□□ 1.47
HMGA2-207ENST00000537275 WDR83Q9BRX9 315 aaKnown RBP24.25■■□□□ 1.47
HMGA2-207ENST00000537275 PARD6BQ9BYG5 372 aa24.25■■□□□ 1.47
HMGA2-207ENST00000537275 MRM3Q9HC36 420 aaKnown RBP24.25■■□□□ 1.47
HMGA2-207ENST00000537275 CHRAC1Q9NRG0 131 aa24.25■■□□□ 1.47
HMGA2-207ENST00000537275 IL17CQ9P0M4 197 aa24.25■■□□□ 1.47
HMGA2-207ENST00000537275 SOX13Q9UN79 622 aa24.25■■□□□ 1.47
HMGA2-207ENST00000537275 ZFR2Q9UPR6 939 aaKnown RBP24.25■■□□□ 1.47
HMGA2-207ENST00000537275 KCTD3Q9Y597 815 aa24.25■■□□□ 1.47
HMGA2-207ENST00000537275 LRRC72A6NJI9 287 aa24.24■■□□□ 1.47
HMGA2-207ENST00000537275 BUD23O43709 281 aaKnown RBP24.24■■□□□ 1.47
HMGA2-207ENST00000537275 SLC4A1P02730 911 aa24.24■■□□□ 1.47
HMGA2-207ENST00000537275 C6P13671 934 aa24.24■■□□□ 1.47
HMGA2-207ENST00000537275 GM2AP17900 193 aa24.24■■□□□ 1.47
HMGA2-207ENST00000537275 KIAA1161Q6NSJ0 714 aa24.24■■□□□ 1.47
HMGA2-207ENST00000537275 CASC4Q6P4E1 433 aa24.24■■□□□ 1.47
HMGA2-207ENST00000537275 HSD11B1LQ7Z5J1 315 aa24.24■■□□□ 1.47
HMGA2-207ENST00000537275 RAVER1Q8IY67 606 aaKnown RBP24.24■■□□□ 1.47
HMGA2-207ENST00000537275 MYRIPQ8NFW9 859 aa24.24■■□□□ 1.47
HMGA2-207ENST00000537275 NELL1Q92832 810 aa24.24■■□□□ 1.47
HMGA2-207ENST00000537275 ZNF778Q96MU6 729 aa24.24■■□□□ 1.47
HMGA2-207ENST00000537275 EBNA1BP2Q99848 306 aaKnown RBP24.24■■□□□ 1.47
HMGA2-207ENST00000537275 C19orf43Q9BQ61 176 aa24.24■■□□□ 1.47
HMGA2-207ENST00000537275 FAM126AQ9BYI3 521 aaPredicted RBP24.24■■□□□ 1.47
HMGA2-207ENST00000537275 TSPYL1Q9H0U9 437 aa24.24■■□□□ 1.47
HMGA2-207ENST00000537275 MAD1L1Q9Y6D9 718 aa24.24■■□□□ 1.47
HMGA2-207ENST00000537275 BPTFQ12830 3046 aa24.23■■□□□ 1.47
HMGA2-207ENST00000537275 LRRK1Q38SD2 2015 aa24.23■■□□□ 1.47
HMGA2-207ENST00000537275 DLL1O00548 723 aa24.23■■□□□ 1.47
HMGA2-207ENST00000537275 CTIFO43310 598 aaKnown RBP24.23■■□□□ 1.47
HMGA2-207ENST00000537275 RNGTTO60942 597 aaKnown RBP24.23■■□□□ 1.47
HMGA2-207ENST00000537275 ELK3P41970 407 aa24.23■■□□□ 1.47
HMGA2-207ENST00000537275 ZNF140P52738 457 aaPredicted RBP24.23■■□□□ 1.47
HMGA2-207ENST00000537275 RPS21P63220 83 aaKnown RBP24.23■■□□□ 1.47
HMGA2-207ENST00000537275 CREB5Q02930 508 aa24.23■■□□□ 1.47
HMGA2-207ENST00000537275 FASTKD3Q14CZ7 662 aaKnown RBP24.23■■□□□ 1.47
HMGA2-207ENST00000537275 ELF2Q15723 593 aa24.23■■□□□ 1.47
HMGA2-207ENST00000537275 TMEM259Q4ZIN3 620 aa24.23■■□□□ 1.47
HMGA2-207ENST00000537275 CCDC25Q86WR0 208 aa24.23■■□□□ 1.47
HMGA2-207ENST00000537275 IGDCC3Q8IVU1 814 aa24.23■■□□□ 1.47
HMGA2-207ENST00000537275 STYXQ8WUJ0 223 aa24.23■■□□□ 1.47
HMGA2-207ENST00000537275 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.23■■□□□ 1.471e-7■■□□□ 11.4
HMGA2-207ENST00000537275 PEX13Q92968 403 aa24.23■■□□□ 1.47
HMGA2-207ENST00000537275 COQ10AQ96MF6 247 aa24.23■■□□□ 1.47
HMGA2-207ENST00000537275 SAYSD1Q9NPB0 183 aa24.23■■□□□ 1.47
HMGA2-207ENST00000537275 SAMD15Q9P1V8 674 aa24.23■■□□□ 1.47
HMGA2-207ENST00000537275 MBD1Q9UIS9 605 aaPredicted RBP24.23■■□□□ 1.47
HMGA2-207ENST00000537275 RAB21Q9UL25 225 aa24.23■■□□□ 1.47
HMGA2-207ENST00000537275 RIMKLBQ9ULI2 386 aa24.23■■□□□ 1.47
HMGA2-207ENST00000537275 A0A1W2PQU0 124 aa24.22■■□□□ 1.47
HMGA2-207ENST00000537275 IGLON5A6NGN9 336 aa24.22■■□□□ 1.47
HMGA2-207ENST00000537275 MAP3K13O43283 966 aa24.22■■□□□ 1.47
HMGA2-207ENST00000537275 NDUFS2O75306 463 aa24.22■■□□□ 1.47
HMGA2-207ENST00000537275 TUBBP07437 444 aa24.22■■□□□ 1.47
HMGA2-207ENST00000537275 MCM3P25205 808 aa24.22■■□□□ 1.47
HMGA2-207ENST00000537275 PSMA3P25788 255 aa24.22■■□□□ 1.47
HMGA2-207ENST00000537275 SPINT3P49223 89 aa24.22■■□□□ 1.47
HMGA2-207ENST00000537275 NUBP1P53384 320 aa24.22■■□□□ 1.47
HMGA2-207ENST00000537275 PTPRCAPQ14761 206 aa24.22■■□□□ 1.47
HMGA2-207ENST00000537275 ZNF528Q3MIS6 628 aa24.22■■□□□ 1.47
HMGA2-207ENST00000537275 HP1BP3Q5SSJ5 553 aaPredicted RBP24.22■■□□□ 1.47
HMGA2-207ENST00000537275 TSTD2Q5T7W7 516 aa24.22■■□□□ 1.47
HMGA2-207ENST00000537275 SEL1L3Q68CR1 1132 aa24.22■■□□□ 1.47
HMGA2-207ENST00000537275 NLRP9Q7RTR0 991 aa24.22■■□□□ 1.47
HMGA2-207ENST00000537275 TECPR1Q7Z6L1 1165 aa24.22■■□□□ 1.47
HMGA2-207ENST00000537275 TMEM135Q86UB9 458 aa24.22■■□□□ 1.47
HMGA2-207ENST00000537275 TRIM69Q86WT6 500 aa24.22■■□□□ 1.47
HMGA2-207ENST00000537275 HORMAD1Q86X24 394 aa24.22■■□□□ 1.47
HMGA2-207ENST00000537275 GSPT2Q8IYD1 628 aaKnown RBP24.22■■□□□ 1.47
HMGA2-207ENST00000537275 ZBED8Q8IZ13 594 aa24.22■■□□□ 1.47
HMGA2-207ENST00000537275 STAMBPL1Q96FJ0 436 aa24.22■■□□□ 1.47
HMGA2-207ENST00000537275 NAT9Q9BTE0 207 aa24.22■■□□□ 1.47
HMGA2-207ENST00000537275 LRFN3Q9BTN0 628 aa24.22■■□□□ 1.47
HMGA2-207ENST00000537275 GPR174Q9BXC1 333 aa24.22■■□□□ 1.47
HMGA2-207ENST00000537275 PKP3Q9Y446 797 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms