RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 GALNT8Q9NY28 637 aa12.9□□□□□ -0.34
TRIM25-202ENST00000537230 CDYLQ9Y232 598 aa12.9□□□□□ -0.34
TRIM25-202ENST00000537230 COPG1Q9Y678 874 aaKnown RBP12.9□□□□□ -0.34
TRIM25-202ENST00000537230 CDH23Q9H251 3354 aa12.9□□□□□ -0.34
TRIM25-202ENST00000537230 SDHDO14521 159 aa12.9□□□□□ -0.34
TRIM25-202ENST00000537230 TRPA1O75762 1119 aa12.9□□□□□ -0.34
TRIM25-202ENST00000537230 S1PR4O95977 384 aa12.9□□□□□ -0.34
TRIM25-202ENST00000537230 PCSK6P29122 969 aa12.9□□□□□ -0.34
TRIM25-202ENST00000537230 PPARGP37231 505 aaPredicted RBP12.9□□□□□ -0.34
TRIM25-202ENST00000537230 C1QTNF8P60827 252 aa12.9□□□□□ -0.34
TRIM25-202ENST00000537230 SERINC3Q13530 473 aa12.9□□□□□ -0.34
TRIM25-202ENST00000537230 SEMA3AQ14563 771 aa12.9□□□□□ -0.34
TRIM25-202ENST00000537230 TRIP4Q15650 581 aaPredicted RBP12.9□□□□□ -0.34
TRIM25-202ENST00000537230 PPP1R3AQ16821 1122 aa12.9□□□□□ -0.34
TRIM25-202ENST00000537230 TCTN1Q2MV58 587 aa12.9□□□□□ -0.34
TRIM25-202ENST00000537230 PIGGQ5H8A4 983 aa12.9□□□□□ -0.34
TRIM25-202ENST00000537230 B3GNT6Q6ZMB0 384 aa12.9□□□□□ -0.34
TRIM25-202ENST00000537230 BLOC1S5Q8TDH9 187 aa12.9□□□□□ -0.34
TRIM25-202ENST00000537230 UBXN10Q96LJ8 280 aa12.9□□□□□ -0.34
TRIM25-202ENST00000537230 SERPINI1Q99574 410 aa12.9□□□□□ -0.34
TRIM25-202ENST00000537230 RBM38Q9H0Z9 239 aaKnown RBP12.9□□□□□ -0.34
TRIM25-202ENST00000537230 Q9H521 79 aa12.9□□□□□ -0.34
TRIM25-202ENST00000537230 VPS45Q9NRW7 570 aa12.9□□□□□ -0.34
TRIM25-202ENST00000537230 NCKIPSDQ9NZQ3 722 aa12.9□□□□□ -0.34
TRIM25-202ENST00000537230 TMCO1Q9UM00 188 aa12.9□□□□□ -0.34
TRIM25-202ENST00000537230 SQORQ9Y6N5 450 aa12.9□□□□□ -0.34
TRIM25-202ENST00000537230 AOC2O75106 756 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 MT-CO1P00395 513 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 ATP5F1P24539 256 aaPredicted RBP12.89□□□□□ -0.35
TRIM25-202ENST00000537230 LCA5Q86VQ0 697 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 ATP6V0D2Q8N8Y2 350 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 OR13C4Q8NGS5 318 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 ALG9Q9H6U8 611 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 LMCD1Q9NZU5 365 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 PRPF19Q9UMS4 504 aaKnown RBP12.89□□□□□ -0.35
TRIM25-202ENST00000537230 A0A087X1B8 175 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 ADAM12O43184 909 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 TLR5O60602 858 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 NBNO60934 754 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 PENKP01210 267 aaPredicted RBP12.89□□□□□ -0.35
TRIM25-202ENST00000537230 IGLV3-27P01718 113 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 SLC4A1P02730 911 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 HDCP19113 662 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 SLC6A4P31645 630 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 MAGEA11P43364 429 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 SLC11A1P49279 550 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 CYLC2Q14093 348 aaPredicted RBP12.89□□□□□ -0.35
TRIM25-202ENST00000537230 FAM83EQ2M2I3 478 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 ZNF549Q6P9A3 640 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 PRSS55Q6UWB4 352 aaPredicted RBP12.89□□□□□ -0.35
TRIM25-202ENST00000537230 C16orf89Q6UX73 402 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 KIAA0408Q6ZU52 694 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 TICAM1Q8IUC6 712 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 DBF4BQ8NFT6 615 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 HMGCLL1Q8TB92 370 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 TADA1Q96BN2 335 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 KLHL32Q96NJ5 620 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 RAB26Q9ULW5 256 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 VWA7Q9Y334 891 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 LOC285095A0A1B0GVY8 99 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 DRGXA6NNA5 263 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 UBFD1O14562 309 aaKnown RBP12.89□□□□□ -0.35
TRIM25-202ENST00000537230 SYN3O14994 580 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 IPO13O94829 963 aaKnown RBP12.89□□□□□ -0.35
TRIM25-202ENST00000537230 TNFAIP8O95379 198 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 ATF6P18850 670 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 POLD2P49005 469 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 SH3BGRP55822 239 aaPredicted RBP12.89□□□□□ -0.35
TRIM25-202ENST00000537230 PRAMEP78395 509 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 TIAL1Q01085 375 aaKnown RBP eCLIP12.89□□□□□ -0.35
TRIM25-202ENST00000537230 PFKPQ01813 784 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 PIWIL4Q7Z3Z4 852 aaKnown RBP12.89□□□□□ -0.35
TRIM25-202ENST00000537230 BCL7CQ8WUZ0 217 aaPredicted RBP12.89□□□□□ -0.35
TRIM25-202ENST00000537230 PTERQ96BW5 349 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 EXOC2Q96KP1 924 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 NPAS2Q99743 824 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 ZBTB26Q9HCK0 441 aa12.89□□□□□ -0.35
TRIM25-202ENST00000537230 TLR8Q9NR97 1041 aaKnown RBP12.89□□□□□ -0.35
TRIM25-202ENST00000537230 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.89□□□□□ -0.35
TRIM25-202ENST00000537230 A0A1W2PQ45 241 aaPredicted RBP12.88□□□□□ -0.35
TRIM25-202ENST00000537230 A0A1W2PQY0 241 aa12.88□□□□□ -0.35
TRIM25-202ENST00000537230 PDLIM1O00151 329 aa12.88□□□□□ -0.35
TRIM25-202ENST00000537230 PPP6CO00743 305 aa12.88□□□□□ -0.35
TRIM25-202ENST00000537230 TMCC1O94876 653 aa12.88□□□□□ -0.35
TRIM25-202ENST00000537230 LTA4HP09960 611 aaKnown RBP12.88□□□□□ -0.35
TRIM25-202ENST00000537230 RPL17P18621 184 aaKnown RBP12.88□□□□□ -0.35
TRIM25-202ENST00000537230 RGRP47804 291 aa12.88□□□□□ -0.35
TRIM25-202ENST00000537230 CLEC6AQ6EIG7 209 aa12.88□□□□□ -0.35
TRIM25-202ENST00000537230 CYHR1Q6ZMK1 362 aa12.88□□□□□ -0.35
TRIM25-202ENST00000537230 AMIGO2Q86SJ2 522 aa12.88□□□□□ -0.35
TRIM25-202ENST00000537230 CPSF7Q8N684 471 aaKnown RBP12.88□□□□□ -0.35
TRIM25-202ENST00000537230 OR7D4Q8NG98 312 aa12.88□□□□□ -0.35
TRIM25-202ENST00000537230 TMA16Q96EY4 203 aaKnown RBP12.88□□□□□ -0.35
TRIM25-202ENST00000537230 PPP1R2P1Q96PQ5 205 aa12.88□□□□□ -0.35
TRIM25-202ENST00000537230 RANBP9Q96S59 729 aa12.88□□□□□ -0.35
TRIM25-202ENST00000537230 MRPL1Q9BYD6 325 aaKnown RBP12.88□□□□□ -0.35
TRIM25-202ENST00000537230 WDR41Q9HAD4 459 aa12.88□□□□□ -0.35
TRIM25-202ENST00000537230 FNIP2Q9P278 1114 aa12.88□□□□□ -0.35
TRIM25-202ENST00000537230 TCAF2A6NFQ2 919 aa12.88□□□□□ -0.35
TRIM25-202ENST00000537230 NPHS1O60500 1241 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms