RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 OSBPL9Q96SU4 736 aa11.33□□□□□ -0.6
TNFRSF1A-208ENST00000536194 ADGRE3Q9BY15 652 aa11.33□□□□□ -0.6
TNFRSF1A-208ENST00000536194 DLL3Q9NYJ7 618 aa11.33□□□□□ -0.6
TNFRSF1A-208ENST00000536194 CDV3Q9UKY7 258 aaKnown RBP11.33□□□□□ -0.6
TNFRSF1A-208ENST00000536194 ZNF106Q9H2Y7 1883 aaKnown RBP11.33□□□□□ -0.6
TNFRSF1A-208ENST00000536194 WDR87Q6ZQQ6 2873 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 K7ESM1 405 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 PSMD11O00231 422 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 FPGTO14772 594 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 ZNF185O15231 689 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 GCATO75600 419 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 STK10O94804 968 aaKnown RBP11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 CER1O95813 267 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 AGTP01019 485 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 PCCBP05166 539 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 CD59P13987 128 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 ETS1P14921 441 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 ZNF30P17039 623 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 ADRA1AP35348 466 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 ATXN3P54252 364 aaPredicted RBP11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 IL9RQ01113 521 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 MPP3Q13368 585 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 ARHGEF7Q14155 803 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 FZD2Q14332 565 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 INPP5AQ14642 412 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 SLC1A5Q15758 541 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 LONRF2Q1L5Z9 754 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 UAP1L1Q3KQV9 507 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 SIRPB2Q5JXA9 342 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 FAXCQ5TGI0 409 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 KCTD11Q693B1 232 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 ITPRIPL1Q6GPH6 555 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 IL27RAQ6UWB1 636 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 LYSMD3Q7Z3D4 306 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 TECPR1Q7Z6L1 1165 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 NDUFAF2Q8N183 169 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 PRELID2Q8N945 189 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 IPMKQ8NFU5 416 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 NUS1Q96E22 293 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 DTD2Q96FN9 168 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 IFT43Q96FT9 208 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 PBKQ96KB5 322 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 FERMT1Q9BQL6 677 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 C1QTNF7Q9BXJ2 289 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 FRMD8P1Q9BZ68 369 aaPredicted RBP11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 GDF3Q9NR23 364 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 PNMA8BQ9ULN7 279 aaPredicted RBP11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 TTC7AQ9ULT0 858 aaPredicted RBP11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 SNX12Q9UMY4 172 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 SPO11Q9Y5K1 396 aa11.32□□□□□ -0.6
TNFRSF1A-208ENST00000536194 DCHS1Q96JQ0 3298 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 C1orf232A0A0U1RR37 186 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 A0A1B0GTQ1 180 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 AURKAO14965 403 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 SOD1P00441 154 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 EPOP01588 193 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 ITGAVP06756 1048 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 NFKBIAP25963 317 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 RABIFP47224 123 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 KCNJ1P48048 391 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 GEMP55040 296 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 GNG11P61952 73 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 PDE1CQ14123 709 aaPredicted RBP11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 SPARCL1Q14515 664 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 P3H1Q32P28 736 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 KCTD16Q68DU8 428 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 ESRP1Q6NXG1 681 aaKnown RBP11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 TTC27Q6P3X3 843 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 DRICH1Q6PGQ1 229 aaPredicted RBP11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 RANBP10Q6VN20 620 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 ARHGEF18Q6ZSZ5 1173 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 TAB3Q8N5C8 712 aaPredicted RBP11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 SLC25A41Q8N5S1 370 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 FAM174AQ8TBP5 190 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 SCAMP4Q969E2 229 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 SKA1Q96BD8 255 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 ELF4Q99607 663 aaPredicted RBP11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 APOL2Q9BQE5 337 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 FICDQ9BVA6 458 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 ERVMER34-1Q9H9K5 563 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 MAGEE1Q9HCI5 957 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 TM7SF3Q9NS93 570 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 CD84Q9UIB8 345 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 KLF15Q9UIH9 416 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 SHOC2Q9UQ13 582 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 ZNF148Q9UQR1 794 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 ZKSCAN5Q9Y2L8 839 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 ZNF711Q9Y462 761 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 OR1A2Q9Y585 309 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 PLXNB3Q9ULL4 1909 aa11.31□□□□□ -0.6
TNFRSF1A-208ENST00000536194 CEP250Q9BV73 2442 aa11.3□□□□□ -0.6
TNFRSF1A-208ENST00000536194 CABIN1Q9Y6J0 2220 aa11.3□□□□□ -0.6
TNFRSF1A-208ENST00000536194 SPTY2D1-AS1A0A0U1RR47 76 aa11.3□□□□□ -0.6
TNFRSF1A-208ENST00000536194 MAGEC1O60732 1142 aa11.3□□□□□ -0.6
TNFRSF1A-208ENST00000536194 USP12O75317 370 aa11.3□□□□□ -0.6
TNFRSF1A-208ENST00000536194 ZNF189O75820 626 aaPredicted RBP11.3□□□□□ -0.6
TNFRSF1A-208ENST00000536194 ANXA9O76027 345 aa11.3□□□□□ -0.6
TNFRSF1A-208ENST00000536194 IFNB1P01574 187 aa11.3□□□□□ -0.6
TNFRSF1A-208ENST00000536194 ZSCAN5DPP0CG00 497 aa11.3□□□□□ -0.6
TNFRSF1A-208ENST00000536194 ZNF883P0CG24 379 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms