RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 ARL14Q8N4G2 192 aa16.2■□□□□ 0.18
CLSTN3-204ENST00000535313 WDR36Q8NI36 951 aaKnown RBP16.2■□□□□ 0.18
CLSTN3-204ENST00000535313 FAM71BQ8TC56 605 aa16.2■□□□□ 0.18
CLSTN3-204ENST00000535313 KCNE4Q8WWG9 221 aa16.2■□□□□ 0.18
CLSTN3-204ENST00000535313 SLC46A1Q96NT5 459 aa16.2■□□□□ 0.18
CLSTN3-204ENST00000535313 BBC3Q96PG8 261 aaPredicted RBP16.2■□□□□ 0.18
CLSTN3-204ENST00000535313 GFM1Q96RP9 751 aaKnown RBP16.2■□□□□ 0.18
CLSTN3-204ENST00000535313 LGR4Q9BXB1 951 aa16.2■□□□□ 0.18
CLSTN3-204ENST00000535313 HAUS2Q9NVX0 235 aa16.2■□□□□ 0.18
CLSTN3-204ENST00000535313 UVRAGQ9P2Y5 699 aa16.2■□□□□ 0.18
CLSTN3-204ENST00000535313 LCMT1Q9UIC8 334 aa16.2■□□□□ 0.18
CLSTN3-204ENST00000535313 SMG1Q96Q15 3661 aaKnown RBP16.2■□□□□ 0.18
CLSTN3-204ENST00000535313 BPTFQ12830 3046 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 CCDC187A0A096LP49 1063 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 PRSS38A1L453 326 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 GOLGA6CA6NDK9 693 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 GOLGA6BA6NDN3 693 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 TMX2-CTNND1H3BSU7 103 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 MFSD11O43934 449 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 RPLP0P05388 317 aaKnown RBP16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 CD48P09326 243 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 H2AFZP0C0S5 128 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 GOLGA6DP0CG33 693 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 ETV3P41162 512 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 GARSP41250 739 aaKnown RBP16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 UCNP55089 124 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 CCL7P80098 99 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 GALNT2Q10471 571 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 DPYSL3Q14195 570 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 PDK2Q15119 407 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 ZSCAN23Q3MJ62 389 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 ZFYVE27Q5T4F4 411 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 H2AFVQ71UI9 128 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 GPR155Q7Z3F1 870 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 HSD11B1LQ7Z5J1 315 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 HEATR4Q86WZ0 1026 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 PELI3Q8N2H9 469 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 TEX26Q8N6G2 289 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 GPR156Q8NFN8 814 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 CTNNBL1Q8WYA6 563 aaPredicted RBP16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 DTD2Q96FN9 168 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 SCRN2Q96FV2 425 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 SEMA3CQ99985 751 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 XPO4Q9C0E2 1151 aaKnown RBP16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 POLR1EQ9GZS1 481 aaKnown RBP16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 TMEM168Q9H0V1 697 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 DPEP2Q9H4A9 486 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 GOLGA6AQ9NYA3 693 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 RABGEF1Q9UJ41 708 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 LRP4O75096 1905 aa16.19■□□□□ 0.18
CLSTN3-204ENST00000535313 A0A1W2PNU3 283 aaPredicted RBP16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 NPIPB15A6NHN6 443 aaPredicted RBP16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 B4DGG1 531 aa16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 CASC3O15234 703 aaKnown RBP16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 KLK10O43240 276 aa16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 PROSCO94903 275 aa16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 KRT7P08729 469 aa16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 GLB1P16278 677 aa16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 LHCGRP22888 699 aa16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 CES1P23141 567 aa16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 HNRNPH3P31942 346 aaKnown RBP16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 MLLT3P42568 568 aaPredicted RBP16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 ARSEP51690 589 aa16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 CXADRP78310 365 aa16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 PAFAH1B3Q15102 231 aaKnown RBP16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 SLC18A3Q16572 532 aa16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 IFI16Q16666 785 aaKnown RBP16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 ATP13A4Q4VNC1 1196 aa16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 ANKRD20A8PQ5CZ79 823 aa16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 CERCAMQ5T4B2 595 aa16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 NCBP2-AS2Q69YL0 99 aa16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 RAET1GQ6H3X3 334 aa16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 OGFOD3Q6PK18 319 aa16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 CCNJLQ8IV13 435 aa16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 Q8N9G6 341 aaPredicted RBP16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 KIAA1524Q8TCG1 905 aa16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 CCDC97Q96F63 343 aaPredicted RBP16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 MCCC1Q96RQ3 725 aaPredicted RBP16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 ZNF670Q9BS34 389 aa16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 TEX101Q9BY14 249 aa16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 DPH1Q9BZG8 443 aa16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 STRADBQ9C0K7 418 aa16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 LRRN3Q9H3W5 708 aa16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 DEF6Q9H4E7 631 aa16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 SUDS3Q9H7L9 328 aaPredicted RBP16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 CARS2Q9HA77 564 aaKnown RBP16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 NENFQ9UMX5 172 aa16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 TTLL3Q9Y4R7 772 aa16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 SHROOM3Q8TF72 1996 aa16.18■□□□□ 0.18
CLSTN3-204ENST00000535313 TEX51A0A1B0GUA7 166 aa16.17■□□□□ 0.18
CLSTN3-204ENST00000535313 D6RAR5 112 aa16.17■□□□□ 0.18
CLSTN3-204ENST00000535313 MATN3O15232 486 aa16.17■□□□□ 0.18
CLSTN3-204ENST00000535313 CBFA2T2O43439 604 aa16.17■□□□□ 0.18
CLSTN3-204ENST00000535313 TNFSF15O95150 251 aa16.17■□□□□ 0.18
CLSTN3-204ENST00000535313 CTPS1P17812 591 aa16.17■□□□□ 0.18
CLSTN3-204ENST00000535313 MX2P20592 715 aa16.17■□□□□ 0.18
CLSTN3-204ENST00000535313 TEAD1P28347 426 aa16.17■□□□□ 0.18
CLSTN3-204ENST00000535313 PDX1P52945 283 aa16.17■□□□□ 0.18
CLSTN3-204ENST00000535313 EPHB1P54762 984 aa16.17■□□□□ 0.18
CLSTN3-204ENST00000535313 TMPRSS3P57727 454 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms