RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 TMPRSS9Q7Z410 1059 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 LDB1Q86U70 411 aaPredicted RBP12.64□□□□□ -0.39
SPG11-203ENST00000535302 PHF10Q8WUB8 498 aaKnown RBP12.64□□□□□ -0.39
SPG11-203ENST00000535302 DNAJC19Q96DA6 116 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 COPG2Q9UBF2 871 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 SNX10Q9Y5X0 201 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 KLRC4O43908 158 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 TLX1P31314 330 aaPredicted RBP12.64□□□□□ -0.39
SPG11-203ENST00000535302 ALG11Q2TAA5 492 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 PABPC1LQ4VXU2 614 aaKnown RBP12.64□□□□□ -0.39
SPG11-203ENST00000535302 TTC23Q5W5X9 447 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 AFTPHQ6ULP2 937 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 INTS7Q9NVH2 962 aaKnown RBP12.64□□□□□ -0.39
SPG11-203ENST00000535302 CFAP97Q9P2B7 532 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 AGO1Q9UL18 857 aaKnown RBP12.64□□□□□ -0.39
SPG11-203ENST00000535302 POLR3HQ9Y535 204 aaPredicted RBP12.64□□□□□ -0.39
SPG11-203ENST00000535302 PCDHB9Q9Y5E1 797 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 KIF20BQ96Q89 1820 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 SGTAO43765 313 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 KCT2Q8NC54 265 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 C1QTNF7Q9BXJ2 289 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 OXCT2Q9BYC2 517 aaPredicted RBP12.64□□□□□ -0.39
SPG11-203ENST00000535302 ALG2Q9H553 416 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 ZNF879B4DU55 563 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 CCL22O00626 93 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 BMP6P22004 513 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 CDH13P55290 713 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 SATL1Q86VE3 508 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 C12orf56Q8IXR9 622 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 HTRA1Q92743 480 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 SKA1Q96BD8 255 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 LMTK2Q8IWU2 1503 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 TBC1D3DA0A087WVF3 549 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 TBC1D3IA0A087WXS9 549 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 TBC1D3EA0A087X179 549 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 TBC1D3KA0A087X1G2 549 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 TBC1D3FA6NER0 549 aaPredicted RBP12.64□□□□□ -0.39
SPG11-203ENST00000535302 TBC1D3LB9A6J9 549 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 AHCYL1O43865 530 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 TLR5O60602 858 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 SLC25A14O95258 325 aaPredicted RBP12.64□□□□□ -0.39
SPG11-203ENST00000535302 FADS2O95864 444 aaKnown RBP12.64□□□□□ -0.39
SPG11-203ENST00000535302 CATP04040 527 aaKnown RBP12.64□□□□□ -0.39
SPG11-203ENST00000535302 TBC1D3HP0C7X1 549 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 RPL9P32969 192 aaKnown RBP12.64□□□□□ -0.39
SPG11-203ENST00000535302 TBC1D3GQ6DHY5 549 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 TBC1D3CQ6IPX1 549 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 MZT2AQ6P582 158 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 TBC1D3Q8IZP1 549 aaPredicted RBP12.64□□□□□ -0.39
SPG11-203ENST00000535302 ANKRD52Q8NB46 1076 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 CHST4Q8NCG5 386 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 ARMC5Q96C12 935 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 PTPN18Q99952 460 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 RIPK3Q9Y572 518 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 ZNF780BQ9Y6R6 833 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 FRMPD1Q5SYB0 1578 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 ASTN2O75129 1339 aaPredicted RBP12.64□□□□□ -0.39
SPG11-203ENST00000535302 SPATA31C1P0DKV0 1188 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 CLK3P49761 638 aaKnown RBP12.64□□□□□ -0.39
SPG11-203ENST00000535302 BAP1Q92560 729 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 UROC1Q96N76 676 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 PNPOQ9NVS9 261 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 PMF1-BGLAPU3KQ54 211 aa12.64□□□□□ -0.39
SPG11-203ENST00000535302 PAGE1O75459 146 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 OTOP2Q7RTS6 562 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 ZNF280BQ86YH2 543 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 FNDC11Q9BVV2 318 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 TNFAIP8O95379 198 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 YAP1P46937 504 aaKnown RBP12.63□□□□□ -0.39
SPG11-203ENST00000535302 MRPS5P82675 430 aaKnown RBP12.63□□□□□ -0.39
SPG11-203ENST00000535302 LIN54Q6MZP7 749 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 MZT2BQ6NZ67 158 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 ADCY4Q8NFM4 1077 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 NPAS2Q99743 824 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 SLC25A23Q9BV35 468 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 C12orf65Q9H3J6 166 aaKnown RBP12.63□□□□□ -0.39
SPG11-203ENST00000535302 RASSF1Q9NS23 344 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.63□□□□□ -0.39
SPG11-203ENST00000535302 TPD52L2O43399 206 aaKnown RBP12.63□□□□□ -0.39
SPG11-203ENST00000535302 COX4I1P13073 169 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 HGFP14210 728 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 USP4Q13107 963 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 RHBDF2Q6PJF5 856 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 PTCHD4Q6ZW05 846 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 FAM35AQ86V20 835 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 FCRL2Q96LA5 508 aaPredicted RBP12.63□□□□□ -0.39
SPG11-203ENST00000535302 TRAPPC9Q96Q05 1148 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 GSDMCQ9BYG8 508 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 SNUPNO95149 360 aaKnown RBP12.63□□□□□ -0.39
SPG11-203ENST00000535302 PSMG1O95456 288 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 MYL9P24844 172 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 FLT3LGP49771 235 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 RAB10P61026 200 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 MEA1Q16626 185 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.63□□□□□ -0.39
SPG11-203ENST00000535302 NEK5Q6P3R8 708 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 PSRC1Q6PGN9 363 aaPredicted RBP12.63□□□□□ -0.39
SPG11-203ENST00000535302 KYAT3Q6YP21 454 aaKnown RBP12.63□□□□□ -0.39
SPG11-203ENST00000535302 OR7A2PQ8NGA2 310 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 FAM110BQ8TC76 370 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms