RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 TREX1Q9NSU2 369 aa19.37■□□□□ 0.69
CAPN1-226ENST00000533820 IPO11Q9UI26 975 aaKnown RBP19.37■□□□□ 0.69
CAPN1-226ENST00000533820 BTRCQ9Y297 605 aa19.37■□□□□ 0.69
CAPN1-226ENST00000533820 TRIM17Q9Y577 477 aa19.37■□□□□ 0.69
CAPN1-226ENST00000533820 MATN3O15232 486 aa19.37■□□□□ 0.69
CAPN1-226ENST00000533820 ALDOCP09972 364 aaKnown RBP19.37■□□□□ 0.69
CAPN1-226ENST00000533820 HSPA1AP0DMV8 641 aaKnown RBP19.37■□□□□ 0.69
CAPN1-226ENST00000533820 HSPA1BP0DMV9 641 aaKnown RBP19.37■□□□□ 0.69
CAPN1-226ENST00000533820 CES1P23141 567 aa19.37■□□□□ 0.69
CAPN1-226ENST00000533820 AXLP30530 894 aa19.37■□□□□ 0.69
CAPN1-226ENST00000533820 CYHR1Q6ZMK1 362 aa19.37■□□□□ 0.69
CAPN1-226ENST00000533820 ZNF786Q8N393 782 aa19.37■□□□□ 0.69
CAPN1-226ENST00000533820 DCUN1D5Q9BTE7 237 aa19.37■□□□□ 0.69
CAPN1-226ENST00000533820 EML4Q9HC35 981 aaKnown RBP19.37■□□□□ 0.69
CAPN1-226ENST00000533820 DOCK3Q8IZD9 2030 aa19.37■□□□□ 0.69
CAPN1-226ENST00000533820 MBLAC1A4D2B0 266 aaPredicted RBP19.36■□□□□ 0.69
CAPN1-226ENST00000533820 J3KR12 359 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 TRIM24O15164 1050 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 CASP2P42575 452 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 RANBP10Q6VN20 620 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 ZBTB46Q86UZ6 589 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 LRRTM3Q86VH5 581 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 RAVER1Q8IY67 606 aaKnown RBP19.36■□□□□ 0.69
CAPN1-226ENST00000533820 AFAP1L2Q8N4X5 818 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 PGAP3Q96FM1 320 aaPredicted RBP19.36■□□□□ 0.69
CAPN1-226ENST00000533820 RMND5BQ96G75 393 aaPredicted RBP19.36■□□□□ 0.69
CAPN1-226ENST00000533820 NSUN5Q96P11 429 aaKnown RBP19.36■□□□□ 0.69
CAPN1-226ENST00000533820 ENTPD7Q9NQZ7 604 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 CCL15-CCL14A0A0B4J2E2 113 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 PSMD3O43242 534 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 HTRA2O43464 458 aaPredicted RBP19.36■□□□□ 0.69
CAPN1-226ENST00000533820 H6PDO95479 791 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 OR4Q2P0C623 313 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 PSEN2P49810 448 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 FOXA1P55317 472 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 DSC2Q02487 901 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 CCL15Q16663 113 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 CLPPQ16740 277 aaPredicted RBP19.36■□□□□ 0.69
CAPN1-226ENST00000533820 FUNDC1Q8IVP5 155 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 CBR4Q8N4T8 237 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 DDI1Q8WTU0 396 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 IL12RB2Q99665 862 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 HEPHQ9BQS7 1158 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 MEAF6Q9HAF1 191 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 TIMM22Q9Y584 194 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 ALDH2P05091 517 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 C8BP07358 591 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 ADRA1AP35348 466 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 KPNA2P52292 529 aaKnown RBP19.36■□□□□ 0.69
CAPN1-226ENST00000533820 STX1BP61266 288 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 PFKPQ01813 784 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 TMEM126BQ8IUX1 230 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 CPNE9Q8IYJ1 553 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 ZNF597Q96LX8 424 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 SLC25A23Q9BV35 468 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 GSTO2Q9H4Y5 243 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 OLAHQ9NV23 265 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 NEU3Q9UQ49 428 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 MYRFQ9Y2G1 1151 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 VWA7Q9Y334 891 aa19.36■□□□□ 0.69
CAPN1-226ENST00000533820 AP3B1O00203 1094 aa19.35■□□□□ 0.69
CAPN1-226ENST00000533820 ADAM23O75077 832 aa19.35■□□□□ 0.69
CAPN1-226ENST00000533820 STAMBPO95630 424 aa19.35■□□□□ 0.69
CAPN1-226ENST00000533820 CCR1P32246 355 aa19.35■□□□□ 0.69
CAPN1-226ENST00000533820 CDC42EP1Q00587 391 aa19.35■□□□□ 0.69
CAPN1-226ENST00000533820 ECT2LQ008S8 904 aa19.35■□□□□ 0.69
CAPN1-226ENST00000533820 PRKCQQ04759 706 aa19.35■□□□□ 0.69
CAPN1-226ENST00000533820 GRB7Q14451 532 aa19.35■□□□□ 0.69
CAPN1-226ENST00000533820 MAPRE2Q15555 327 aa19.35■□□□□ 0.69
CAPN1-226ENST00000533820 TBCELQ5QJ74 424 aa19.35■□□□□ 0.69
CAPN1-226ENST00000533820 SCN4BQ8IWT1 228 aa19.35■□□□□ 0.69
CAPN1-226ENST00000533820 PBXIP1Q96AQ6 731 aa19.35■□□□□ 0.69
CAPN1-226ENST00000533820 RTP3Q9BQQ7 232 aa19.35■□□□□ 0.69
CAPN1-226ENST00000533820 AKTIPQ9H8T0 292 aa19.35■□□□□ 0.69
CAPN1-226ENST00000533820 PDCD11Q14690 1871 aaKnown RBP19.35■□□□□ 0.69
CAPN1-226ENST00000533820 RALGAPA2Q2PPJ7 1873 aa19.35■□□□□ 0.69
CAPN1-226ENST00000533820 KANSL1LA0AUZ9 987 aa19.35■□□□□ 0.69
CAPN1-226ENST00000533820 SLC10A7Q0GE19 358 aa19.35■□□□□ 0.69
CAPN1-226ENST00000533820 IQSEC1Q6DN90 963 aa19.35■□□□□ 0.69
CAPN1-226ENST00000533820 KIAA0930Q6ICG6 404 aaPredicted RBP19.35■□□□□ 0.69
CAPN1-226ENST00000533820 PTERQ96BW5 349 aa19.35■□□□□ 0.69
CAPN1-226ENST00000533820 UPF3AQ9H1J1 476 aaKnown RBP19.35■□□□□ 0.69
CAPN1-226ENST00000533820 SOX17Q9H6I2 414 aaPredicted RBP19.35■□□□□ 0.69
CAPN1-226ENST00000533820 MID1IP1Q9NPA3 183 aa19.35■□□□□ 0.69
CAPN1-226ENST00000533820 RSL24D1Q9UHA3 163 aaKnown RBP19.35■□□□□ 0.69
CAPN1-226ENST00000533820 A0A0J9YYE9 177 aa19.34■□□□□ 0.69
CAPN1-226ENST00000533820 RNF103-CHMP3A0A140T963 221 aa19.34■□□□□ 0.69
CAPN1-226ENST00000533820 TMX2-CTNND1H3BSU7 103 aa19.34■□□□□ 0.69
CAPN1-226ENST00000533820 SLC7A1P30825 629 aa19.34■□□□□ 0.69
CAPN1-226ENST00000533820 STT3AP46977 705 aa19.34■□□□□ 0.69
CAPN1-226ENST00000533820 APLP1P51693 650 aa19.34■□□□□ 0.69
CAPN1-226ENST00000533820 IHHQ14623 411 aa19.34■□□□□ 0.69
CAPN1-226ENST00000533820 PFKFB4Q16877 469 aa19.34■□□□□ 0.69
CAPN1-226ENST00000533820 SAMD4BQ5PRF9 694 aaKnown RBP19.34■□□□□ 0.69
CAPN1-226ENST00000533820 SCIMPQ6UWF3 145 aa19.34■□□□□ 0.69
CAPN1-226ENST00000533820 C19orf60Q96EN9 201 aa19.34■□□□□ 0.69
CAPN1-226ENST00000533820 TSGA13Q96PP4 275 aa19.34■□□□□ 0.69
CAPN1-226ENST00000533820 OSBPL11Q9BXB4 747 aa19.34■□□□□ 0.69
CAPN1-226ENST00000533820 TUBA8Q9NY65 449 aaPredicted RBP19.34■□□□□ 0.69
CAPN1-226ENST00000533820 ARL5CA6NH57 179 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms