RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 ACP6Q9NPH0 428 aa7.02□□□□□ -1.28
CTNND1-236ENST00000533667 FETUBQ9UGM5 382 aa7.02□□□□□ -1.28
CTNND1-236ENST00000533667 PCDHGC3Q9UN70 934 aa7.02□□□□□ -1.28
CTNND1-236ENST00000533667 LOC100506127A0A0U1RQW1 187 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 UBE2QL1A1L167 161 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 CCDC162PA2VCL2 907 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 CCDC182A6NF36 153 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 SPTLC1O15269 473 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 GSC2O15499 205 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 IL12AP29459 219 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 WEE1P30291 646 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 ACADVLP49748 655 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 CCR3P51677 355 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 RIPPLY1Q0D2K3 151 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 BNIP1Q12981 228 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 BIKQ13323 160 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 ARSHQ5FYA8 562 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 ADGRD1Q6QNK2 874 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 C16orf59Q7L2K0 433 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 CLNKQ7Z7G1 428 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 CUZD1Q86UP6 607 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 FAM35AQ86V20 835 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 ZFPM1Q8IX07 1006 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 CDYL2Q8N8U2 506 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 CAPSLQ8WWF8 208 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 IRGQQ8WZA9 623 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 AKT1S1Q96B36 256 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 SPOCK3Q9BQ16 436 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 EPB41L1Q9H4G0 881 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 S100A14Q9HCY8 104 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 SLCO1B3Q9NPD5 702 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 COG5Q9UP83 839 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 SAMHD1Q9Y3Z3 626 aaKnown RBP7.02□□□□□ -1.29
CTNND1-236ENST00000533667 BCL9LQ86UU0 1499 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 GSAPA4D1B5 854 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 NOTOA8MTQ0 251 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 SUV39H1O43463 412 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 LRIG2O94898 1065 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 HIST1H2ABP04908 130 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 ITGB5P18084 799 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 EPHA3P29320 983 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 TGFBR2P37173 567 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 WNT3AP56704 352 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 PUDPQ08623 228 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 KLF10Q13118 480 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 IKBKEQ14164 716 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 QPRTQ15274 297 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 HGSNATQ68CP4 663 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 DENND5AQ6IQ26 1287 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 AGMOQ6ZNB7 445 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 HIST3H2AQ7L7L0 130 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 APTXQ7Z2E3 356 aaKnown RBP7.02□□□□□ -1.29
CTNND1-236ENST00000533667 IRF2BP1Q8IU81 584 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 HIST1H2ACQ93077 130 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 ZNF558Q96NG5 402 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 LGMNQ99538 433 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 S100A13Q99584 98 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 TDRD1Q9BXT4 1180 aaKnown RBP7.02□□□□□ -1.29
CTNND1-236ENST00000533667 TRIT1Q9H3H1 467 aaKnown RBP7.02□□□□□ -1.29
CTNND1-236ENST00000533667 AGO1Q9UL18 857 aaKnown RBP7.02□□□□□ -1.29
CTNND1-236ENST00000533667 RFXANKO14593 260 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 HAT1O14929 419 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 MDM4O15151 490 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 DHX15O43143 795 aaKnown RBP7.02□□□□□ -1.29
CTNND1-236ENST00000533667 SEMA3DO95025 777 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 SNHG28P0DPA3 235 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 CAPGP40121 348 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 TNFSF9P41273 254 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 ALG11Q2TAA5 492 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 PARP15Q460N3 678 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 TEX44Q53QW1 395 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 NOMO2Q5JPE7 1267 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 DRICH1Q6PGQ1 229 aaPredicted RBP7.02□□□□□ -1.29
CTNND1-236ENST00000533667 RBM44Q6ZP01 1051 aaKnown RBP7.02□□□□□ -1.29
CTNND1-236ENST00000533667 CXXC5Q7LFL8 322 aaKnown RBP7.02□□□□□ -1.29
CTNND1-236ENST00000533667 DEFB128Q7Z7B8 93 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 ALYREFQ86V81 257 aaKnown RBP7.02□□□□□ -1.29
CTNND1-236ENST00000533667 PDPRQ8NCN5 879 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 GRPEL2Q8TAA5 225 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 DQX1Q8TE96 717 aaKnown RBP7.02□□□□□ -1.29
CTNND1-236ENST00000533667 PANX1Q96RD7 426 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 COPS8Q99627 209 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 PIGUQ9H490 435 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 HMX1Q9NP08 348 aaPredicted RBP7.02□□□□□ -1.29
CTNND1-236ENST00000533667 SSR3Q9UNL2 185 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 NID2Q14112 1375 aa7.02□□□□□ -1.29
CTNND1-236ENST00000533667 A0A1W2PPM1 405 aa7.01□□□□□ -1.29
CTNND1-236ENST00000533667 PRR5-ARHGAP8B1AHC4 643 aa7.01□□□□□ -1.29
CTNND1-236ENST00000533667 STMND1H3BQB6 276 aa7.01□□□□□ -1.29
CTNND1-236ENST00000533667 IDH3BO43837 385 aa7.01□□□□□ -1.29
CTNND1-236ENST00000533667 NR2F6P10588 404 aa7.01□□□□□ -1.29
CTNND1-236ENST00000533667 BMP7P18075 431 aa7.01□□□□□ -1.29
CTNND1-236ENST00000533667 ABCG1P45844 678 aa7.01□□□□□ -1.29
CTNND1-236ENST00000533667 HNMTP50135 292 aa7.01□□□□□ -1.29
CTNND1-236ENST00000533667 SLC7A2P52569 658 aa7.01□□□□□ -1.29
CTNND1-236ENST00000533667 ARHGAP8P85298 464 aa7.01□□□□□ -1.29
CTNND1-236ENST00000533667 LGALS3BPQ08380 585 aa7.01□□□□□ -1.29
CTNND1-236ENST00000533667 PEX6Q13608 980 aa7.01□□□□□ -1.29
CTNND1-236ENST00000533667 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.01□□□□□ -1.29
CTNND1-236ENST00000533667 HIPK1Q86Z02 1210 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms