RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 MCM9Q9NXL9 1143 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 ZNF224Q9NZL3 707 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 SLC9A2Q9UBY0 812 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 MALT1Q9UDY8 824 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 SIX4Q9UIU6 781 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 VDAC3Q9Y277 283 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 CEPT1Q9Y6K0 416 aa2.74□□□□□ -1.97
ATM-220ENST00000533526 IGHV4OR15-8A0A075B7B6 117 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 A0A1W2PPH5 198 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 A0A1W2PRG0 241 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 HNRNPCL2B2RXH8 293 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 EIF3CLB5ME19 914 aaKnown RBP2.73□□□□□ -1.97
ATM-220ENST00000533526 SOCS6O14544 535 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 CREB3O43889 395 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 SEC14L2O76054 403 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 MCM3P25205 808 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 EPHA8P29322 1005 aaPredicted RBP2.73□□□□□ -1.97
ATM-220ENST00000533526 ELF1P32519 619 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 CLCNKAP51800 687 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 EFNA5P52803 228 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 RPL7AP62424 266 aaKnown RBP2.73□□□□□ -1.97
ATM-220ENST00000533526 TROAPQ12815 778 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 GRIK2Q13002 908 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 TBX2Q13207 712 aaPredicted RBP2.73□□□□□ -1.97
ATM-220ENST00000533526 CTF1Q16619 201 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 SYT16Q17RD7 645 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 C2orf68Q2NKX9 166 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 MMEL1Q495T6 779 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 ZNF672Q499Z4 452 aaPredicted RBP2.73□□□□□ -1.97
ATM-220ENST00000533526 SLC45A4Q5BKX6 768 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 C9orf50Q5SZB4 431 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 TRNP1Q6NT89 227 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 KCTD18Q6PI47 426 aaPredicted RBP2.73□□□□□ -1.97
ATM-220ENST00000533526 CCNI2Q6ZMN8 369 aaPredicted RBP2.73□□□□□ -1.97
ATM-220ENST00000533526 TUBA1AQ71U36 451 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 HEATR4Q86WZ0 1026 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 SFR1Q86XK3 245 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 NAGSQ8N159 534 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 RFLNBQ8N5W9 214 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 GTF3C6Q969F1 213 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 SMARCE1Q969G3 411 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 ZUFSPQ96AP4 578 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 FAM149B1Q96BN6 582 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 LMLNQ96KR4 655 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 IL17FQ96PD4 163 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 MAP7D2Q96T17 732 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 TUBA1CQ9BQE3 449 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 TMEM47Q9BQJ4 181 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 HAUS8Q9BT25 410 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 GLIS2Q9BZE0 524 aaPredicted RBP2.73□□□□□ -1.97
ATM-220ENST00000533526 SLC25A18Q9H1K4 315 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 VPS33BQ9H267 617 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 UNC45AQ9H3U1 944 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 UBTD1Q9HAC8 227 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 HINT3Q9NQE9 182 aaKnown RBP2.73□□□□□ -1.97
ATM-220ENST00000533526 PLSCR4Q9NRQ2 329 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 KCNG2Q9UJ96 466 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 ICAM5Q9UMF0 924 aa2.73□□□□□ -1.97
ATM-220ENST00000533526 MID1O15344 667 aa2.72□□□□□ -1.97
ATM-220ENST00000533526 BUB3O43684 328 aa2.72□□□□□ -1.97
ATM-220ENST00000533526 TMEM63AO94886 807 aa2.72□□□□□ -1.97
ATM-220ENST00000533526 KDM4BO94953 1096 aa2.72□□□□□ -1.97
ATM-220ENST00000533526 SEC31AO94979 1220 aaKnown RBP2.72□□□□□ -1.97
ATM-220ENST00000533526 AGR2O95994 175 aa2.72□□□□□ -1.97
ATM-220ENST00000533526 F7P08709 466 aaPredicted RBP2.72□□□□□ -1.97
ATM-220ENST00000533526 LINC00271P0C7V0 271 aa2.72□□□□□ -1.97
ATM-220ENST00000533526 ZNF182P17025 639 aaPredicted RBP2.72□□□□□ -1.97
ATM-220ENST00000533526 PSMA4P25789 261 aaKnown RBP2.72□□□□□ -1.97
ATM-220ENST00000533526 KRT9P35527 623 aa2.72□□□□□ -1.97
ATM-220ENST00000533526 IL15P40933 162 aaPredicted RBP2.72□□□□□ -1.97
ATM-220ENST00000533526 EIF2S3P41091 472 aaKnown RBP2.72□□□□□ -1.97
ATM-220ENST00000533526 RARSP54136 660 aaKnown RBP2.72□□□□□ -1.97
ATM-220ENST00000533526 HNRNPH2P55795 449 aaKnown RBP2.72□□□□□ -1.97
ATM-220ENST00000533526 FGFBP1Q14512 234 aa2.72□□□□□ -1.97
ATM-220ENST00000533526 ZRSR1Q15695 479 aaKnown RBP2.72□□□□□ -1.97
ATM-220ENST00000533526 DPCR1Q3MIW9 517 aa2.72□□□□□ -1.97
ATM-220ENST00000533526 SETMARQ53H47 684 aaPredicted RBP2.72□□□□□ -1.97
ATM-220ENST00000533526 SIGIRRQ6IA17 410 aa2.72□□□□□ -1.97
ATM-220ENST00000533526 CCDC70Q6NSX1 233 aa2.72□□□□□ -1.97
ATM-220ENST00000533526 WDR73Q6P4I2 378 aa2.72□□□□□ -1.97
ATM-220ENST00000533526 ATF7IPQ6VMQ6 1270 aa2.72□□□□□ -1.97
ATM-220ENST00000533526 SLC36A4Q6YBV0 504 aa2.72□□□□□ -1.97
ATM-220ENST00000533526 CACNA2D4Q7Z3S7 1137 aa2.72□□□□□ -1.97
ATM-220ENST00000533526 R3HCC1LQ7Z5L2 792 aaKnown RBP2.72□□□□□ -1.97
ATM-220ENST00000533526 CHERPQ8IWX8 916 aaKnown RBP2.72□□□□□ -1.97
ATM-220ENST00000533526 POC1AQ8NBT0 407 aa2.72□□□□□ -1.97
ATM-220ENST00000533526 ETNPPLQ8TBG4 499 aa2.72□□□□□ -1.97
ATM-220ENST00000533526 PSPC1Q8WXF1 523 aaKnown RBP2.72□□□□□ -1.97
ATM-220ENST00000533526 FIG4Q92562 907 aa2.72□□□□□ -1.97
ATM-220ENST00000533526 PABPC5Q96DU9 382 aaKnown RBP2.72□□□□□ -1.97
ATM-220ENST00000533526 CDCA5Q96FF9 252 aa2.72□□□□□ -1.97
ATM-220ENST00000533526 CSF3RQ99062 836 aa2.72□□□□□ -1.97
ATM-220ENST00000533526 EIF2AK1Q9BQI3 630 aaKnown RBP2.72□□□□□ -1.97
ATM-220ENST00000533526 EVA1AQ9H8M9 152 aa2.72□□□□□ -1.97
ATM-220ENST00000533526 EBF2Q9HAK2 575 aa2.72□□□□□ -1.97
ATM-220ENST00000533526 SLC6A13Q9NSD5 602 aa2.72□□□□□ -1.97
ATM-220ENST00000533526 DLGAP2Q9P1A6 1054 aa2.72□□□□□ -1.97
ATM-220ENST00000533526 POU2F3Q9UKI9 436 aa2.72□□□□□ -1.97
ATM-220ENST00000533526 INTS6Q9UL03 887 aaKnown RBP2.72□□□□□ -1.97
ATM-220ENST00000533526 CAMK2AQ9UQM7 478 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms