RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 ACTR3BQ9P1U1 418 aa16.65■□□□□ 0.26
CTSB-228ENST00000533455 PTPRDP23468 1912 aa16.64■□□□□ 0.25
CTSB-228ENST00000533455 ATP6AP2A0A1C7CYW4 349 aa16.64■□□□□ 0.25
CTSB-228ENST00000533455 DYTNA2CJ06 578 aa16.64■□□□□ 0.25
CTSB-228ENST00000533455 NR5A2O00482 541 aa16.64■□□□□ 0.25
CTSB-228ENST00000533455 SLC7A4O43246 635 aa16.64■□□□□ 0.25
CTSB-228ENST00000533455 ATP6AP2O75787 350 aa16.64■□□□□ 0.25
CTSB-228ENST00000533455 MATN4O95460 622 aa16.64■□□□□ 0.25
CTSB-228ENST00000533455 FGF4P08620 206 aa16.64■□□□□ 0.25
CTSB-228ENST00000533455 FASP25445 335 aa16.64■□□□□ 0.25
CTSB-228ENST00000533455 PSMA4P25789 261 aaKnown RBP16.64■□□□□ 0.25
CTSB-228ENST00000533455 SERPINH1P50454 418 aaKnown RBP16.64■□□□□ 0.25
CTSB-228ENST00000533455 CRYBB1P53674 252 aaPredicted RBP16.64■□□□□ 0.25
CTSB-228ENST00000533455 TMED1Q13445 227 aa16.64■□□□□ 0.25
CTSB-228ENST00000533455 NOMO2Q5JPE7 1267 aa16.64■□□□□ 0.25
CTSB-228ENST00000533455 TMEM207Q6UWW9 146 aa16.64■□□□□ 0.25
CTSB-228ENST00000533455 PHYKPLQ8IUZ5 450 aa16.64■□□□□ 0.25
CTSB-228ENST00000533455 ZNF786Q8N393 782 aa16.64■□□□□ 0.25
CTSB-228ENST00000533455 CENPNQ96H22 339 aaPredicted RBP16.64■□□□□ 0.25
CTSB-228ENST00000533455 MYRFLQ96LU7 910 aa16.64■□□□□ 0.25
CTSB-228ENST00000533455 ABHD16BQ9H3Z7 469 aa16.64■□□□□ 0.25
CTSB-228ENST00000533455 CD320Q9NPF0 282 aa16.64■□□□□ 0.25
CTSB-228ENST00000533455 CACNG4Q9UBN1 327 aa16.64■□□□□ 0.25
CTSB-228ENST00000533455 FAF1Q9UNN5 650 aaPredicted RBP16.64■□□□□ 0.25
CTSB-228ENST00000533455 TIMM13Q9Y5L4 95 aaPredicted RBP16.64■□□□□ 0.25
CTSB-228ENST00000533455 HEMK1Q9Y5R4 338 aaPredicted RBP16.64■□□□□ 0.25
CTSB-228ENST00000533455 SH3PXD2BA1X283 911 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 TTC24A2A3L6 582 aaPredicted RBP16.63■□□□□ 0.25
CTSB-228ENST00000533455 TNPO2O14787 897 aaKnown RBP16.63■□□□□ 0.25
CTSB-228ENST00000533455 PAGE1O75459 146 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 MT-CO1P00395 513 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 GNAO1P09471 354 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 CAPN3P20807 821 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 PCSK1P29120 753 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 KCNC1P48547 511 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 CCT8P50990 548 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 CDKN2DP55273 166 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 CTBSQ01459 385 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 ILF2Q12905 390 aaKnown RBP16.63■□□□□ 0.25
CTSB-228ENST00000533455 KIF19Q2TAC6 998 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 EML3Q32P44 896 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 COLGALT2Q8IYK4 626 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 ADGRG5Q8IZF4 528 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 MIER2Q8N344 545 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 SEPT8Q92599 483 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 C12orf43Q96C57 262 aaKnown RBP16.63■□□□□ 0.25
CTSB-228ENST00000533455 LRCH3Q96II8 777 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 DOK1Q99704 481 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 MUC13Q9H3R2 512 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 MFSD1Q9H3U5 465 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 HIPK3Q9H422 1215 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 NDFIP2Q9NV92 336 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 EBF1Q9UH73 591 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 AURKCQ9UQB9 309 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 RASAL1O95294 804 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 S1PR4O95977 384 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 GPIP06744 558 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 FCGR1AP12314 374 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 TTKP33981 857 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 MFSD10Q14728 455 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 GPR158Q5T848 1215 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 FAM219BQ5XKK7 198 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 KANK2Q63ZY3 851 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 TWF2Q6IBS0 349 aaKnown RBP16.63■□□□□ 0.25
CTSB-228ENST00000533455 Q6ZNX1 250 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 ZNF554Q86TJ5 538 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 SPPL2CQ8IUH8 684 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 RTL3Q8N8U3 475 aaKnown RBP16.63■□□□□ 0.25
CTSB-228ENST00000533455 ZNF420Q8TAQ5 688 aaPredicted RBP16.63■□□□□ 0.25
CTSB-228ENST00000533455 HSPBAP1Q96EW2 488 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 CDCA5Q96FF9 252 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 NPLQ9BXD5 320 aaPredicted RBP16.63■□□□□ 0.25
CTSB-228ENST00000533455 SPON1Q9HCB6 807 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 FAIMQ9NVQ4 179 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 GID8Q9NWU2 228 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 CMTM6Q9NX76 183 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 FNIP2Q9P278 1114 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 SFMBT1Q9UHJ3 866 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 DNAJC15Q9Y5T4 150 aa16.63■□□□□ 0.25
CTSB-228ENST00000533455 ANKRD36A6QL64 1941 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 ANGPT2O15123 496 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 ACOX3O15254 700 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 TSPAN8P19075 237 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 GJA5P36382 358 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 STT3AP46977 705 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 SCNN1BP51168 640 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 SH3BP2P78314 561 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 PCSK7Q16549 785 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 TMTC4Q5T4D3 741 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 DUS1LQ6P1R4 473 aaKnown RBP16.62■□□□□ 0.25
CTSB-228ENST00000533455 KDELC2Q7Z4H8 507 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 TERB1Q8NA31 727 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 ABTB1Q969K4 478 aaPredicted RBP16.62■□□□□ 0.25
CTSB-228ENST00000533455 PTERQ96BW5 349 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 IMP4Q96G21 291 aaKnown RBP16.62■□□□□ 0.25
CTSB-228ENST00000533455 RTP3Q9BQQ7 232 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 POLR3BQ9NW08 1133 aaPredicted RBP16.62■□□□□ 0.25
CTSB-228ENST00000533455 ZNF510Q9Y2H8 683 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 NLRC5Q86WI3 1866 aa16.62■□□□□ 0.25
CTSB-228ENST00000533455 MROH6A6NGR9 719 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms