RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 GLIS1Q8NBF1 620 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 IPMKQ8NFU5 416 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 FAM174AQ8TBP5 190 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 ACTRT1Q8TDG2 376 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 SKA1Q96BD8 255 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 KLHDC7BQ96G42 594 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 NAPGQ99747 312 aaPredicted RBP12□□□□□ -0.49
SSBP3-214ENST00000533209 IL21RQ9HBE5 538 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 TMEM9BQ9NQ34 198 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 GPR27Q9NS67 375 aa12□□□□□ -0.49
SSBP3-214ENST00000533209 C1orf232A0A0U1RR37 186 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 C4orf47A7E2U8 309 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 MAGEC1O60732 1142 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 AGTP01019 485 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 IFNB1P01574 187 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 C1SP09871 688 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 PIRTP0C851 137 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 ETS1P14921 441 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 TCP1P17987 556 aaKnown RBP11.99□□□□□ -0.49
SSBP3-214ENST00000533209 ETV3P41162 512 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 KCNJ1P48048 391 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 ATXN3P54252 364 aaPredicted RBP11.99□□□□□ -0.49
SSBP3-214ENST00000533209 OLIG2Q13516 323 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 PRPSAP1Q14558 356 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 SLC1A5Q15758 541 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 ZNF423Q2M1K9 1284 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 P3H1Q32P28 736 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 SIRPB2Q5JXA9 342 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 PRAMEF14Q5SWL7 426 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 TPRG1LQ5T0D9 272 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 KCTD11Q693B1 232 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 CCDC70Q6NSX1 233 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 IL27RAQ6UWB1 636 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 RANBP10Q6VN20 620 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 Q6ZSR6 202 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 RFLNAQ6ZTI6 216 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 Q6ZVL8 140 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 PTAR1Q7Z6K3 402 aaPredicted RBP11.99□□□□□ -0.49
SSBP3-214ENST00000533209 PRUNE1Q86TP1 453 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 SLC22A18ASQ8N1D0 253 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 PELI3Q8N2H9 469 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 SLC25A41Q8N5S1 370 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 PLA2G15Q8NCC3 412 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 NETO1Q8TDF5 533 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 EID2BQ96D98 161 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 NUS1Q96E22 293 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 DTD2Q96FN9 168 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 NAP1L3Q99457 506 aaPredicted RBP11.99□□□□□ -0.49
SSBP3-214ENST00000533209 FICDQ9BVA6 458 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 AP1M1Q9BXS5 423 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 GAREM1Q9H706 876 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 MAGEE1Q9HCI5 957 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 HOMER3Q9NSC5 361 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 DNAAF2Q9NVR5 837 aaKnown RBP11.99□□□□□ -0.49
SSBP3-214ENST00000533209 FNDC3AQ9Y2H6 1198 aaKnown RBP11.99□□□□□ -0.49
SSBP3-214ENST00000533209 AAR2Q9Y312 384 aaKnown RBP11.99□□□□□ -0.49
SSBP3-214ENST00000533209 SPO11Q9Y5K1 396 aa11.99□□□□□ -0.49
SSBP3-214ENST00000533209 CTAGE9A4FU28 777 aa11.98□□□□□ -0.49
SSBP3-214ENST00000533209 CER1O95813 267 aa11.98□□□□□ -0.49
SSBP3-214ENST00000533209 FGF1P05230 155 aa11.98□□□□□ -0.49
SSBP3-214ENST00000533209 HLA-DPA1P20036 260 aa11.98□□□□□ -0.49
SSBP3-214ENST00000533209 RABIFP47224 123 aa11.98□□□□□ -0.49
SSBP3-214ENST00000533209 MTM1Q13496 603 aa11.98□□□□□ -0.49
SSBP3-214ENST00000533209 SPARCL1Q14515 664 aa11.98□□□□□ -0.49
SSBP3-214ENST00000533209 INPP5AQ14642 412 aa11.98□□□□□ -0.49
SSBP3-214ENST00000533209 CYP1B1Q16678 543 aa11.98□□□□□ -0.49
SSBP3-214ENST00000533209 FAXCQ5TGI0 409 aa11.98□□□□□ -0.49
SSBP3-214ENST00000533209 DENND5AQ6IQ26 1287 aa11.98□□□□□ -0.49
SSBP3-214ENST00000533209 ESRP1Q6NXG1 681 aaKnown RBP11.98□□□□□ -0.49
SSBP3-214ENST00000533209 TTC27Q6P3X3 843 aa11.98□□□□□ -0.49
SSBP3-214ENST00000533209 LYSMD3Q7Z3D4 306 aa11.98□□□□□ -0.49
SSBP3-214ENST00000533209 DCP2Q8IU60 420 aaKnown RBP11.98□□□□□ -0.49
SSBP3-214ENST00000533209 TAB3Q8N5C8 712 aaPredicted RBP11.98□□□□□ -0.49
SSBP3-214ENST00000533209 PPP1R2P1Q96PQ5 205 aa11.98□□□□□ -0.49
SSBP3-214ENST00000533209 FSD1LQ9BXM9 530 aa11.98□□□□□ -0.49
SSBP3-214ENST00000533209 ABCG8Q9H221 673 aa11.98□□□□□ -0.49
SSBP3-214ENST00000533209 ERVMER34-1Q9H9K5 563 aa11.98□□□□□ -0.49
SSBP3-214ENST00000533209 GDF3Q9NR23 364 aa11.98□□□□□ -0.49
SSBP3-214ENST00000533209 KCTD5Q9NXV2 234 aa11.98□□□□□ -0.49
SSBP3-214ENST00000533209 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.98□□□□□ -0.49
SSBP3-214ENST00000533209 SHOC2Q9UQ13 582 aa11.98□□□□□ -0.49
SSBP3-214ENST00000533209 ZNF711Q9Y462 761 aa11.98□□□□□ -0.49
SSBP3-214ENST00000533209 SPTY2D1-AS1A0A0U1RR47 76 aa11.97□□□□□ -0.49
SSBP3-214ENST00000533209 K7ESM1 405 aa11.97□□□□□ -0.49
SSBP3-214ENST00000533209 TOR1BO14657 336 aa11.97□□□□□ -0.49
SSBP3-214ENST00000533209 SLC30A4O14863 429 aa11.97□□□□□ -0.49
SSBP3-214ENST00000533209 AURKAO14965 403 aa11.97□□□□□ -0.49
SSBP3-214ENST00000533209 USP12O75317 370 aa11.97□□□□□ -0.49
SSBP3-214ENST00000533209 PCCBP05166 539 aa11.97□□□□□ -0.49
SSBP3-214ENST00000533209 ZSCAN5DPP0CG00 497 aa11.97□□□□□ -0.49
SSBP3-214ENST00000533209 ZNF883P0CG24 379 aa11.97□□□□□ -0.49
SSBP3-214ENST00000533209 RPL22P35268 128 aaKnown RBP11.97□□□□□ -0.49
SSBP3-214ENST00000533209 TRIM23P36406 574 aa11.97□□□□□ -0.49
SSBP3-214ENST00000533209 COILP38432 576 aaPredicted RBP11.97□□□□□ -0.49
SSBP3-214ENST00000533209 TNNT3P45378 269 aaPredicted RBP11.97□□□□□ -0.49
SSBP3-214ENST00000533209 SPINT3P49223 89 aa11.97□□□□□ -0.49
SSBP3-214ENST00000533209 ETF1P62495 437 aaKnown RBP11.97□□□□□ -0.49
SSBP3-214ENST00000533209 YPEL5P62699 121 aa11.97□□□□□ -0.49
SSBP3-214ENST00000533209 PDE1CQ14123 709 aaPredicted RBP11.97□□□□□ -0.49
SSBP3-214ENST00000533209 FZD2Q14332 565 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms