RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 TUBGCP5Q96RT8 1024 aa18.54■□□□□ 0.56
SMPD1-208ENST00000533123 SLC2A6Q9UGQ3 507 aa18.54■□□□□ 0.56
SMPD1-208ENST00000533123 IL36AQ9UHA7 158 aa18.54■□□□□ 0.56
SMPD1-208ENST00000533123 TCAF1Q9Y4C2 921 aa18.54■□□□□ 0.56
SMPD1-208ENST00000533123 HTRA2O43464 458 aaPredicted RBP18.54■□□□□ 0.56
SMPD1-208ENST00000533123 FZD6O60353 706 aa18.54■□□□□ 0.56
SMPD1-208ENST00000533123 PGLSO95336 258 aa18.54■□□□□ 0.56
SMPD1-208ENST00000533123 PRKCGP05129 697 aa18.54■□□□□ 0.56
SMPD1-208ENST00000533123 PIRTP0C851 137 aa18.54■□□□□ 0.56
SMPD1-208ENST00000533123 CHRM1P11229 460 aaPredicted RBP18.54■□□□□ 0.56
SMPD1-208ENST00000533123 HLA-DPA1P20036 260 aa18.54■□□□□ 0.56
SMPD1-208ENST00000533123 ADRA1DP25100 572 aa18.54■□□□□ 0.56
SMPD1-208ENST00000533123 SERPINB9P50453 376 aa18.54■□□□□ 0.56
SMPD1-208ENST00000533123 SF3A3Q12874 501 aaKnown RBP eCLIP18.54■□□□□ 0.56
SMPD1-208ENST00000533123 ARMC12Q5T9G4 340 aa18.54■□□□□ 0.56
SMPD1-208ENST00000533123 LVRNQ6Q4G3 990 aa18.54■□□□□ 0.56
SMPD1-208ENST00000533123 CDHR3Q6ZTQ4 885 aa18.54■□□□□ 0.56
SMPD1-208ENST00000533123 ZSWIM9Q86XI8 627 aa18.54■□□□□ 0.56
SMPD1-208ENST00000533123 PPHLN1Q8NEY8 458 aaKnown RBP18.54■□□□□ 0.56
SMPD1-208ENST00000533123 ALKBH8Q96BT7 664 aaKnown RBP18.54■□□□□ 0.56
SMPD1-208ENST00000533123 ADGRE3Q9BY15 652 aa18.54■□□□□ 0.56
SMPD1-208ENST00000533123 SUV39H2Q9H5I1 410 aa18.54■□□□□ 0.56
SMPD1-208ENST00000533123 ANKRD66B4E2M5 251 aa18.53■□□□□ 0.56
SMPD1-208ENST00000533123 SOCS5O75159 536 aa18.53■□□□□ 0.56
SMPD1-208ENST00000533123 ZWINTO95229 277 aa18.53■□□□□ 0.56
SMPD1-208ENST00000533123 NEK3P51956 506 aa18.53■□□□□ 0.56
SMPD1-208ENST00000533123 NAB1Q13506 487 aa18.53■□□□□ 0.56
SMPD1-208ENST00000533123 ENPP2Q13822 863 aa18.53■□□□□ 0.56
SMPD1-208ENST00000533123 FRG1Q14331 258 aaKnown RBP18.53■□□□□ 0.56
SMPD1-208ENST00000533123 PTPRRQ15256 657 aa18.53■□□□□ 0.56
SMPD1-208ENST00000533123 POM121L1PQ3SYA9 428 aa18.53■□□□□ 0.56
SMPD1-208ENST00000533123 TEDDM1Q5T9Z0 273 aa18.53■□□□□ 0.56
SMPD1-208ENST00000533123 ESRP1Q6NXG1 681 aaKnown RBP18.53■□□□□ 0.56
SMPD1-208ENST00000533123 GDPD4Q6W3E5 623 aa18.53■□□□□ 0.56
SMPD1-208ENST00000533123 CPLX4Q7Z7G2 160 aa18.53■□□□□ 0.56
SMPD1-208ENST00000533123 IL17RCQ8NAC3 791 aa18.53■□□□□ 0.56
SMPD1-208ENST00000533123 SPOCK2Q92563 424 aa18.53■□□□□ 0.56
SMPD1-208ENST00000533123 MTBPQ96DY7 904 aa18.53■□□□□ 0.56
SMPD1-208ENST00000533123 ATXN7L3BQ96GX2 97 aa18.53■□□□□ 0.56
SMPD1-208ENST00000533123 KLHL32Q96NJ5 620 aa18.53■□□□□ 0.56
SMPD1-208ENST00000533123 PRSS16Q9NQE7 514 aa18.53■□□□□ 0.56
SMPD1-208ENST00000533123 ARHGEF3Q9NR81 526 aa18.53■□□□□ 0.56
SMPD1-208ENST00000533123 IARS2Q9NSE4 1012 aaKnown RBP18.53■□□□□ 0.56
SMPD1-208ENST00000533123 SUN2Q9UH99 717 aa18.53■□□□□ 0.56
SMPD1-208ENST00000533123 EBAG9O00559 213 aa18.53■□□□□ 0.56
SMPD1-208ENST00000533123 FGF1P05230 155 aa18.53■□□□□ 0.56
SMPD1-208ENST00000533123 ABCG1P45844 678 aa18.53■□□□□ 0.56
SMPD1-208ENST00000533123 EPHB1P54762 984 aa18.53■□□□□ 0.56
SMPD1-208ENST00000533123 IL9RQ01113 521 aa18.53■□□□□ 0.56
SMPD1-208ENST00000533123 MSLNQ13421 630 aaPredicted RBP18.53■□□□□ 0.56
SMPD1-208ENST00000533123 CCINQ13939 588 aa18.53■□□□□ 0.56
SMPD1-208ENST00000533123 ELAVL3Q14576 367 aaKnown RBP18.53■□□□□ 0.56
SMPD1-208ENST00000533123 ZNF852Q6ZMS4 543 aa18.53■□□□□ 0.56
SMPD1-208ENST00000533123 PCMTD2Q9NV79 361 aa18.53■□□□□ 0.56
SMPD1-208ENST00000533123 TXNDC16Q9P2K2 825 aa18.53■□□□□ 0.56
SMPD1-208ENST00000533123 FBXL21Q9UKT6 434 aa18.53■□□□□ 0.56
SMPD1-208ENST00000533123 SARDHQ9UL12 918 aa18.53■□□□□ 0.56
SMPD1-208ENST00000533123 KRBA1A5PL33 1030 aa18.52■□□□□ 0.56
SMPD1-208ENST00000533123 MAN2B1O00754 1011 aa18.52■□□□□ 0.56
SMPD1-208ENST00000533123 NPC1O15118 1278 aa18.52■□□□□ 0.56
SMPD1-208ENST00000533123 TOP3BO95985 862 aaKnown RBP18.52■□□□□ 0.56
SMPD1-208ENST00000533123 ALDOAP04075 364 aaKnown RBP18.52■□□□□ 0.56
SMPD1-208ENST00000533123 ITGA2BP08514 1039 aa18.52■□□□□ 0.56
SMPD1-208ENST00000533123 NTSR1P30989 418 aa18.52■□□□□ 0.56
SMPD1-208ENST00000533123 GRM3Q14832 879 aa18.52■□□□□ 0.56
SMPD1-208ENST00000533123 ZKSCAN8Q15776 578 aaPredicted RBP18.52■□□□□ 0.56
SMPD1-208ENST00000533123 ZNF449Q6P9G9 518 aa18.52■□□□□ 0.56
SMPD1-208ENST00000533123 STRA8Q7Z7C7 330 aa18.52■□□□□ 0.56
SMPD1-208ENST00000533123 TXNDC5Q8NBS9 432 aaKnown RBP18.52■□□□□ 0.56
SMPD1-208ENST00000533123 PIH1D2Q8WWB5 315 aa18.52■□□□□ 0.56
SMPD1-208ENST00000533123 OR8D1Q8WZ84 308 aa18.52■□□□□ 0.56
SMPD1-208ENST00000533123 MAGEB18Q96M61 343 aa18.52■□□□□ 0.56
SMPD1-208ENST00000533123 ZNF641Q96N77 438 aaPredicted RBP18.52■□□□□ 0.56
SMPD1-208ENST00000533123 FAM129BQ96TA1 746 aa18.52■□□□□ 0.56
SMPD1-208ENST00000533123 SLC13A1Q9BZW2 595 aa18.52■□□□□ 0.56
SMPD1-208ENST00000533123 CD320Q9NPF0 282 aa18.52■□□□□ 0.56
SMPD1-208ENST00000533123 FGFR1OP2Q9NVK5 253 aa18.52■□□□□ 0.56
SMPD1-208ENST00000533123 CTPS1P17812 591 aa18.51■□□□□ 0.55
SMPD1-208ENST00000533123 ARNTP27540 789 aa18.51■□□□□ 0.55
SMPD1-208ENST00000533123 GP5P40197 560 aa18.51■□□□□ 0.55
SMPD1-208ENST00000533123 CCNFP41002 786 aa18.51■□□□□ 0.55
SMPD1-208ENST00000533123 HHATQ5VTY9 493 aa18.51■□□□□ 0.55
SMPD1-208ENST00000533123 BLOC1S5Q8TDH9 187 aa18.51■□□□□ 0.55
SMPD1-208ENST00000533123 ECHDC3Q96DC8 303 aa18.51■□□□□ 0.55
SMPD1-208ENST00000533123 SRPK1Q96SB4 655 aaKnown RBP18.51■□□□□ 0.55
SMPD1-208ENST00000533123 CPNE1Q99829 537 aa18.51■□□□□ 0.55
SMPD1-208ENST00000533123 WNT16Q9UBV4 365 aa18.51■□□□□ 0.55
SMPD1-208ENST00000533123 COPEO14579 308 aa18.51■□□□□ 0.55
SMPD1-208ENST00000533123 TPP1O14773 563 aa18.51■□□□□ 0.55
SMPD1-208ENST00000533123 ADAM23O75077 832 aa18.51■□□□□ 0.55
SMPD1-208ENST00000533123 VAPBO95292 243 aa18.51■□□□□ 0.55
SMPD1-208ENST00000533123 KLF8O95600 359 aaPredicted RBP18.51■□□□□ 0.55
SMPD1-208ENST00000533123 TAC1P20366 129 aa18.51■□□□□ 0.55
SMPD1-208ENST00000533123 CNTFP26441 200 aa18.51■□□□□ 0.55
SMPD1-208ENST00000533123 GTF2A1P52655 376 aaPredicted RBP18.51■□□□□ 0.55
SMPD1-208ENST00000533123 CNGA3Q16281 694 aa18.51■□□□□ 0.55
SMPD1-208ENST00000533123 GJD3Q8N144 294 aa18.51■□□□□ 0.55
SMPD1-208ENST00000533123 KCNV2Q8TDN2 545 aa18.51■□□□□ 0.55
SMPD1-208ENST00000533123 FAM111AQ96PZ2 611 aa18.51■□□□□ 0.55
SMPD1-208ENST00000533123 TREX1Q9NSU2 369 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms