RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 TRIM23P36406 574 aa19.87■□□□□ 0.77
CPSF1-209ENST00000532725 ETV3P41162 512 aa19.87■□□□□ 0.77
CPSF1-209ENST00000532725 MTM1Q13496 603 aa19.87■□□□□ 0.77
CPSF1-209ENST00000532725 GALNT3Q14435 633 aa19.87■□□□□ 0.77
CPSF1-209ENST00000532725 PCSK7Q16549 785 aa19.87■□□□□ 0.77
CPSF1-209ENST00000532725 PPM1JQ5JR12 505 aa19.87■□□□□ 0.77
CPSF1-209ENST00000532725 ANKRD20A2Q5SQ80 823 aa19.87■□□□□ 0.77
CPSF1-209ENST00000532725 ANKRD20A1Q5TYW2 823 aa19.87■□□□□ 0.77
CPSF1-209ENST00000532725 ANKRD20A3Q5VUR7 823 aa19.87■□□□□ 0.77
CPSF1-209ENST00000532725 PNCKQ6P2M8 343 aa19.87■□□□□ 0.77
CPSF1-209ENST00000532725 RFLNAQ6ZTI6 216 aa19.87■□□□□ 0.77
CPSF1-209ENST00000532725 Q6ZVL8 140 aa19.87■□□□□ 0.77
CPSF1-209ENST00000532725 KANSL1Q7Z3B3 1105 aa19.87■□□□□ 0.77
CPSF1-209ENST00000532725 GATAD2AQ86YP4 633 aa19.87■□□□□ 0.77
CPSF1-209ENST00000532725 NAXDQ8IW45 347 aa19.87■□□□□ 0.77
CPSF1-209ENST00000532725 PELI3Q8N2H9 469 aa19.87■□□□□ 0.77
CPSF1-209ENST00000532725 SETD7Q8WTS6 366 aaKnown RBP19.87■□□□□ 0.77
CPSF1-209ENST00000532725 DTD2Q96FN9 168 aa19.87■□□□□ 0.77
CPSF1-209ENST00000532725 APOOQ9BUR5 198 aa19.87■□□□□ 0.77
CPSF1-209ENST00000532725 SLC32A1Q9H598 525 aa19.87■□□□□ 0.77
CPSF1-209ENST00000532725 KCTD5Q9NXV2 234 aa19.87■□□□□ 0.77
CPSF1-209ENST00000532725 KLF15Q9UIH9 416 aa19.87■□□□□ 0.77
CPSF1-209ENST00000532725 PCOLCE2Q9UKZ9 415 aa19.87■□□□□ 0.77
CPSF1-209ENST00000532725 DNPEPQ9ULA0 475 aa19.87■□□□□ 0.77
CPSF1-209ENST00000532725 BTBD3Q9Y2F9 522 aa19.87■□□□□ 0.77
CPSF1-209ENST00000532725 C5orf60A6NFR6 353 aa19.86■□□□□ 0.77
CPSF1-209ENST00000532725 FLRT2O43155 660 aa19.86■□□□□ 0.77
CPSF1-209ENST00000532725 ZNF189O75820 626 aaPredicted RBP19.86■□□□□ 0.77
CPSF1-209ENST00000532725 CLDN7O95471 211 aa19.86■□□□□ 0.77
CPSF1-209ENST00000532725 NDST3O95803 873 aa19.86■□□□□ 0.77
CPSF1-209ENST00000532725 PCCBP05166 539 aa19.86■□□□□ 0.77
CPSF1-209ENST00000532725 EPHA8P29322 1005 aaPredicted RBP19.86■□□□□ 0.77
CPSF1-209ENST00000532725 NOVA1P51513 510 aaKnown RBP19.86■□□□□ 0.77
CPSF1-209ENST00000532725 STC1P52823 247 aa19.86■□□□□ 0.77
CPSF1-209ENST00000532725 WNT3AP56704 352 aa19.86■□□□□ 0.77
CPSF1-209ENST00000532725 EIF2B5Q13144 721 aaKnown RBP19.86■□□□□ 0.77
CPSF1-209ENST00000532725 PTK2BQ14289 1009 aa19.86■□□□□ 0.77
CPSF1-209ENST00000532725 ZNF542PQ5EBM4 170 aa19.86■□□□□ 0.77
CPSF1-209ENST00000532725 PSAPL1Q6NUJ1 521 aa19.86■□□□□ 0.77
CPSF1-209ENST00000532725 ESRP1Q6NXG1 681 aaKnown RBP19.86■□□□□ 0.77
CPSF1-209ENST00000532725 ERMP1Q7Z2K6 904 aa19.86■□□□□ 0.77
CPSF1-209ENST00000532725 RAVER1Q8IY67 606 aaKnown RBP19.86■□□□□ 0.77
CPSF1-209ENST00000532725 SLC25A45Q8N413 288 aa19.86■□□□□ 0.77
CPSF1-209ENST00000532725 RHBDD1Q8TEB9 315 aa19.86■□□□□ 0.77
CPSF1-209ENST00000532725 NUS1Q96E22 293 aa19.86■□□□□ 0.77
CPSF1-209ENST00000532725 MRGPRX2Q96LB1 330 aa19.86■□□□□ 0.77
CPSF1-209ENST00000532725 GORASP1Q9BQQ3 440 aa19.86■□□□□ 0.77
CPSF1-209ENST00000532725 GBA3Q9H227 469 aa19.86■□□□□ 0.77
CPSF1-209ENST00000532725 MAGEE1Q9HCI5 957 aa19.86■□□□□ 0.77
CPSF1-209ENST00000532725 TRMT1Q9NXH9 659 aaKnown RBP19.86■□□□□ 0.77
CPSF1-209ENST00000532725 RSPH14Q9UHP6 348 aa19.86■□□□□ 0.77
CPSF1-209ENST00000532725 PNMA8BQ9ULN7 279 aaPredicted RBP19.86■□□□□ 0.77
CPSF1-209ENST00000532725 F5H423 210 aaPredicted RBP19.85■□□□□ 0.77
CPSF1-209ENST00000532725 K7ESM1 405 aa19.85■□□□□ 0.77
CPSF1-209ENST00000532725 CSF2P04141 144 aa19.85■□□□□ 0.77
CPSF1-209ENST00000532725 ITGAVP06756 1048 aa19.85■□□□□ 0.77
CPSF1-209ENST00000532725 HOXC4P09017 264 aaPredicted RBP19.85■□□□□ 0.77
CPSF1-209ENST00000532725 C1SP09871 688 aa19.85■□□□□ 0.77
CPSF1-209ENST00000532725 THOP1P52888 689 aa19.85■□□□□ 0.77
CPSF1-209ENST00000532725 MPP3Q13368 585 aa19.85■□□□□ 0.77
CPSF1-209ENST00000532725 NLRP8Q86W28 1048 aa19.85■□□□□ 0.77
CPSF1-209ENST00000532725 PARGQ86W56 976 aa19.85■□□□□ 0.77
CPSF1-209ENST00000532725 FAM71DQ8N9W8 422 aa19.85■□□□□ 0.77
CPSF1-209ENST00000532725 BAHD1Q8TBE0 780 aaPredicted RBP19.85■□□□□ 0.77
CPSF1-209ENST00000532725 CCDC110Q8TBZ0 833 aa19.85■□□□□ 0.77
CPSF1-209ENST00000532725 EID2BQ96D98 161 aa19.85■□□□□ 0.77
CPSF1-209ENST00000532725 SPATA13Q96N96 652 aa19.85■□□□□ 0.77
CPSF1-209ENST00000532725 DNAJC28Q9NX36 388 aa19.85■□□□□ 0.77
CPSF1-209ENST00000532725 JRKLQ9Y4A0 524 aa19.85■□□□□ 0.77
CPSF1-209ENST00000532725 OR1A2Q9Y585 309 aa19.85■□□□□ 0.77
CPSF1-209ENST00000532725 ARID1BQ8NFD5 2236 aaPredicted RBP19.84■□□□□ 0.77
CPSF1-209ENST00000532725 GCATO75600 419 aa19.84■□□□□ 0.77
CPSF1-209ENST00000532725 STK10O94804 968 aaKnown RBP19.84■□□□□ 0.77
CPSF1-209ENST00000532725 ATXN1LP0C7T5 689 aaKnown RBP19.84■□□□□ 0.77
CPSF1-209ENST00000532725 NME1P15531 152 aaKnown RBP19.84■□□□□ 0.77
CPSF1-209ENST00000532725 DGKAP23743 735 aa19.84■□□□□ 0.77
CPSF1-209ENST00000532725 GRK6P43250 576 aa19.84■□□□□ 0.77
CPSF1-209ENST00000532725 DPTQ07507 201 aa19.84■□□□□ 0.77
CPSF1-209ENST00000532725 SIX1Q15475 284 aaPredicted RBP19.84■□□□□ 0.77
CPSF1-209ENST00000532725 ITPRIPL1Q6GPH6 555 aa19.84■□□□□ 0.77
CPSF1-209ENST00000532725 CCDC70Q6NSX1 233 aa19.84■□□□□ 0.77
CPSF1-209ENST00000532725 MACC1Q6ZN28 852 aa19.84■□□□□ 0.77
CPSF1-209ENST00000532725 ATG4AQ8WYN0 398 aa19.84■□□□□ 0.77
CPSF1-209ENST00000532725 FUBP1Q96AE4 644 aaKnown RBP19.84■□□□□ 0.77
CPSF1-209ENST00000532725 TMEM121Q9BTD3 319 aa19.84■□□□□ 0.77
CPSF1-209ENST00000532725 FRMD8P1Q9BZ68 369 aaPredicted RBP19.84■□□□□ 0.77
CPSF1-209ENST00000532725 ABCG8Q9H221 673 aa19.84■□□□□ 0.77
CPSF1-209ENST00000532725 TP53BP1Q12888 1972 aaPredicted RBP19.84■□□□□ 0.77
CPSF1-209ENST00000532725 C1orf232A0A0U1RR37 186 aa19.83■□□□□ 0.77
CPSF1-209ENST00000532725 ENC1O14682 589 aa19.83■□□□□ 0.77
CPSF1-209ENST00000532725 LIASO43766 372 aa19.83■□□□□ 0.77
CPSF1-209ENST00000532725 SDC3O75056 442 aa19.83■□□□□ 0.77
CPSF1-209ENST00000532725 PIAS2O75928 621 aa19.83■□□□□ 0.77
CPSF1-209ENST00000532725 ANXA9O76027 345 aa19.83■□□□□ 0.77
CPSF1-209ENST00000532725 STIP1P31948 543 aaKnown RBP19.83■□□□□ 0.77
CPSF1-209ENST00000532725 CXCR5P32302 372 aa19.83■□□□□ 0.77
CPSF1-209ENST00000532725 GDF10P55107 478 aa19.83■□□□□ 0.77
CPSF1-209ENST00000532725 NFATC4Q14934 902 aa19.83■□□□□ 0.77
CPSF1-209ENST00000532725 OASLQ15646 514 aaKnown RBP19.83■□□□□ 0.77
CPSF1-209ENST00000532725 TRIP6Q15654 476 aaKnown RBP19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms