RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 LGMNQ99538 433 aa17.82■□□□□ 0.44
SMG1-203ENST00000532700 CEP41Q9BYV8 373 aa17.82■□□□□ 0.44
SMG1-203ENST00000532700 BRD8Q9H0E9 1235 aa17.82■□□□□ 0.44
SMG1-203ENST00000532700 TMEM168Q9H0V1 697 aa17.82■□□□□ 0.44
SMG1-203ENST00000532700 DEF6Q9H4E7 631 aa17.82■□□□□ 0.44
SMG1-203ENST00000532700 SUDS3Q9H7L9 328 aaPredicted RBP17.82■□□□□ 0.44
SMG1-203ENST00000532700 URB1O60287 2271 aaKnown RBP17.82■□□□□ 0.44
SMG1-203ENST00000532700 LOC400499M0QZD8 3231 aa17.81■□□□□ 0.44
SMG1-203ENST00000532700 FAM208BQ5VWN6 2430 aa17.81■□□□□ 0.44
SMG1-203ENST00000532700 A0A087WV48 116 aa17.81■□□□□ 0.44
SMG1-203ENST00000532700 MATN3O15232 486 aa17.81■□□□□ 0.44
SMG1-203ENST00000532700 USP12O75317 370 aa17.81■□□□□ 0.44
SMG1-203ENST00000532700 MMP2P08253 660 aa17.81■□□□□ 0.44
SMG1-203ENST00000532700 POLD2P49005 469 aa17.81■□□□□ 0.44
SMG1-203ENST00000532700 POLR2LP62875 67 aaKnown RBP17.81■□□□□ 0.44
SMG1-203ENST00000532700 ITKQ08881 620 aa17.81■□□□□ 0.44
SMG1-203ENST00000532700 PDK2Q15119 407 aa17.81■□□□□ 0.44
SMG1-203ENST00000532700 TECPR1Q7Z6L1 1165 aa17.81■□□□□ 0.44
SMG1-203ENST00000532700 HEATR4Q86WZ0 1026 aa17.81■□□□□ 0.44
SMG1-203ENST00000532700 CNTD1Q8N815 330 aa17.81■□□□□ 0.44
SMG1-203ENST00000532700 OR56A4Q8NGH8 313 aa17.81■□□□□ 0.44
SMG1-203ENST00000532700 CCDC74AQ96AQ1 378 aa17.81■□□□□ 0.44
SMG1-203ENST00000532700 ATXN7L3BQ96GX2 97 aa17.81■□□□□ 0.44
SMG1-203ENST00000532700 TSGA13Q96PP4 275 aa17.81■□□□□ 0.44
SMG1-203ENST00000532700 RNF157Q96PX1 679 aa17.81■□□□□ 0.44
SMG1-203ENST00000532700 AGAP2Q99490 1192 aa17.81■□□□□ 0.44
SMG1-203ENST00000532700 CCDC3Q9BQI4 270 aa17.81■□□□□ 0.44
SMG1-203ENST00000532700 USP29Q9HBJ7 922 aa17.81■□□□□ 0.44
SMG1-203ENST00000532700 CYP4F12Q9HCS2 524 aa17.81■□□□□ 0.44
SMG1-203ENST00000532700 RBM22Q9NW64 420 aaKnown RBP eCLIP17.81■□□□□ 0.44
SMG1-203ENST00000532700 GULP1Q9UBP9 304 aa17.81■□□□□ 0.44
SMG1-203ENST00000532700 PADI4Q9UM07 663 aa17.81■□□□□ 0.44
SMG1-203ENST00000532700 PHTF1Q9UMS5 762 aa17.81■□□□□ 0.44
SMG1-203ENST00000532700 CHKBQ9Y259 395 aa17.81■□□□□ 0.44
SMG1-203ENST00000532700 PPIL1Q9Y3C6 166 aa17.81■□□□□ 0.44
SMG1-203ENST00000532700 TTLL3Q9Y4R7 772 aa17.81■□□□□ 0.44
SMG1-203ENST00000532700 ENTPD2Q9Y5L3 495 aa17.81■□□□□ 0.44
SMG1-203ENST00000532700 DGKBQ9Y6T7 804 aa17.81■□□□□ 0.44
SMG1-203ENST00000532700 SCN8AQ9UQD0 1980 aa17.8■□□□□ 0.44
SMG1-203ENST00000532700 ARHGEF17Q96PE2 2063 aaPredicted RBP17.8■□□□□ 0.44
SMG1-203ENST00000532700 LRRD1A4D1F6 860 aa17.8■□□□□ 0.44
SMG1-203ENST00000532700 KCNK1O00180 336 aa17.8■□□□□ 0.44
SMG1-203ENST00000532700 NOBOXO60393 691 aa17.8■□□□□ 0.44
SMG1-203ENST00000532700 MTA2O94776 668 aa17.8■□□□□ 0.44
SMG1-203ENST00000532700 EIF2S3P41091 472 aaKnown RBP17.8■□□□□ 0.44
SMG1-203ENST00000532700 DUSP3P51452 185 aaPredicted RBP17.8■□□□□ 0.44
SMG1-203ENST00000532700 IFI16Q16666 785 aaKnown RBP17.8■□□□□ 0.44
SMG1-203ENST00000532700 ISXQ2M1V0 245 aa17.8■□□□□ 0.44
SMG1-203ENST00000532700 ARMC12Q5T9G4 340 aa17.8■□□□□ 0.44
SMG1-203ENST00000532700 LRRC66Q68CR7 880 aa17.8■□□□□ 0.44
SMG1-203ENST00000532700 B3GNT8Q7Z7M8 397 aa17.8■□□□□ 0.44
SMG1-203ENST00000532700 PDZD3Q86UT5 571 aa17.8■□□□□ 0.44
SMG1-203ENST00000532700 TRIM74Q86UV6 250 aa17.8■□□□□ 0.44
SMG1-203ENST00000532700 NRROSQ86YC3 692 aa17.8■□□□□ 0.44
SMG1-203ENST00000532700 FSTL5Q8N475 847 aaPredicted RBP17.8■□□□□ 0.44
SMG1-203ENST00000532700 TC2NQ8N9U0 490 aa17.8■□□□□ 0.44
SMG1-203ENST00000532700 SCRN2Q96FV2 425 aa17.8■□□□□ 0.44
SMG1-203ENST00000532700 TDRD1Q9BXT4 1180 aaKnown RBP17.8■□□□□ 0.44
SMG1-203ENST00000532700 WDR26Q9H7D7 661 aa17.8■□□□□ 0.44
SMG1-203ENST00000532700 GPR34Q9UPC5 381 aa17.8■□□□□ 0.44
SMG1-203ENST00000532700 PLEKHM1Q9Y4G2 1056 aa17.8■□□□□ 0.44
SMG1-203ENST00000532700 PCYT1BQ9Y5K3 369 aaPredicted RBP17.8■□□□□ 0.44
SMG1-203ENST00000532700 A0A1W2PQM1 296 aa17.79■□□□□ 0.44
SMG1-203ENST00000532700 PRSS38A1L453 326 aa17.79■□□□□ 0.44
SMG1-203ENST00000532700 CEACAM5P06731 702 aa17.79■□□□□ 0.44
SMG1-203ENST00000532700 KRT7P08729 469 aa17.79■□□□□ 0.44
SMG1-203ENST00000532700 CTSEP14091 401 aa17.79■□□□□ 0.44
SMG1-203ENST00000532700 CCNB1P14635 433 aa17.79■□□□□ 0.44
SMG1-203ENST00000532700 CCNCP24863 283 aa17.79■□□□□ 0.44
SMG1-203ENST00000532700 HTR1BP28222 390 aa17.79■□□□□ 0.44
SMG1-203ENST00000532700 NOP2P46087 812 aaKnown RBP17.79■□□□□ 0.44
SMG1-203ENST00000532700 GABREP78334 506 aa17.79■□□□□ 0.44
SMG1-203ENST00000532700 PTSQ03393 145 aa17.79■□□□□ 0.44
SMG1-203ENST00000532700 LLGL1Q15334 1064 aa17.79■□□□□ 0.44
SMG1-203ENST00000532700 ELOCQ15369 112 aa17.79■□□□□ 0.44
SMG1-203ENST00000532700 SLC9A4Q6AI14 798 aa17.79■□□□□ 0.44
SMG1-203ENST00000532700 ARL10Q8N8L6 244 aa17.79■□□□□ 0.44
SMG1-203ENST00000532700 SCAMP4Q969E2 229 aa17.79■□□□□ 0.44
SMG1-203ENST00000532700 HDAC11Q96DB2 347 aa17.79■□□□□ 0.44
SMG1-203ENST00000532700 PRR11Q96HE9 360 aaPredicted RBP17.79■□□□□ 0.44
SMG1-203ENST00000532700 BBC3Q96PG8 261 aaPredicted RBP17.79■□□□□ 0.44
SMG1-203ENST00000532700 DEPDC7Q96QD5 511 aa17.79■□□□□ 0.44
SMG1-203ENST00000532700 TEX101Q9BY14 249 aa17.79■□□□□ 0.44
SMG1-203ENST00000532700 FRMD8Q9BZ67 464 aaPredicted RBP17.79■□□□□ 0.44
SMG1-203ENST00000532700 POLR1EQ9GZS1 481 aaKnown RBP17.79■□□□□ 0.44
SMG1-203ENST00000532700 ABCG4Q9H172 646 aa17.79■□□□□ 0.44
SMG1-203ENST00000532700 ABCG8Q9H221 673 aa17.79■□□□□ 0.44
SMG1-203ENST00000532700 ZFC3H1O60293 1989 aaKnown RBP17.79■□□□□ 0.44
SMG1-203ENST00000532700 A0A0J9YYE9 177 aa17.78■□□□□ 0.44
SMG1-203ENST00000532700 CACNB4O00305 520 aaPredicted RBP17.78■□□□□ 0.44
SMG1-203ENST00000532700 NTN3O00634 580 aaPredicted RBP17.78■□□□□ 0.44
SMG1-203ENST00000532700 TNFP01375 233 aa17.78■□□□□ 0.44
SMG1-203ENST00000532700 TRBC1P01850 177 aa17.78■□□□□ 0.44
SMG1-203ENST00000532700 KRT1P04264 644 aa17.78■□□□□ 0.44
SMG1-203ENST00000532700 MYCLP1P12525 358 aaPredicted RBP17.78■□□□□ 0.44
SMG1-203ENST00000532700 TNNT1P13805 278 aa17.78■□□□□ 0.44
SMG1-203ENST00000532700 MARCKSL1P49006 195 aa17.78■□□□□ 0.44
SMG1-203ENST00000532700 BLKP51451 505 aa17.78■□□□□ 0.44
SMG1-203ENST00000532700 CDK3Q00526 305 aa17.78■□□□□ 0.44
SMG1-203ENST00000532700 ADCY2Q08462 1091 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms