RNA–Protein interactions for RNA: ENST00000532446.5

PPP1CA-208, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 1,465 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-208ENST00000532446 FZD4Q9ULV1 537 aa17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 ITM2BQ9Y287 266 aa17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 KCTD3Q9Y597 815 aa17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 FADS3Q9Y5Q0 445 aa17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 ZNF318Q5VUA4 2279 aa17.98■□□□□ 0.47
PPP1CA-208ENST00000532446 CCDC78A2IDD5 438 aa17.98■□□□□ 0.47
PPP1CA-208ENST00000532446 SLC7A4O43246 635 aa17.98■□□□□ 0.47
PPP1CA-208ENST00000532446 ALDH1A2O94788 518 aa17.98■□□□□ 0.47
PPP1CA-208ENST00000532446 TTC4O95801 387 aa17.98■□□□□ 0.47
PPP1CA-208ENST00000532446 POLBP06746 335 aa17.98■□□□□ 0.47
PPP1CA-208ENST00000532446 TSHRP16473 764 aa17.98■□□□□ 0.47
PPP1CA-208ENST00000532446 ZNF30P17039 623 aa17.98■□□□□ 0.47
PPP1CA-208ENST00000532446 LPOP22079 712 aaPredicted RBP17.98■□□□□ 0.47
PPP1CA-208ENST00000532446 GPX6P59796 221 aa17.98■□□□□ 0.47
PPP1CA-208ENST00000532446 PDE1BQ01064 536 aa17.98■□□□□ 0.47
PPP1CA-208ENST00000532446 PTSQ03393 145 aa17.98■□□□□ 0.47
PPP1CA-208ENST00000532446 SFSWAPQ12872 951 aaKnown RBP17.98■□□□□ 0.47
PPP1CA-208ENST00000532446 CNGA3Q16281 694 aa17.98■□□□□ 0.47
PPP1CA-208ENST00000532446 TMEM52BQ4KMG9 183 aa17.98■□□□□ 0.47
PPP1CA-208ENST00000532446 UBAP2Q5T6F2 1119 aaKnown RBP17.98■□□□□ 0.47
PPP1CA-208ENST00000532446 ANO7Q6IWH7 933 aa17.98■□□□□ 0.47
PPP1CA-208ENST00000532446 CES3Q6UWW8 571 aa17.98■□□□□ 0.47
PPP1CA-208ENST00000532446 KBTBD6Q86V97 674 aa17.98■□□□□ 0.47
PPP1CA-208ENST00000532446 RASSF3Q86WH2 238 aa17.98■□□□□ 0.47
PPP1CA-208ENST00000532446 MREGQ8N565 214 aa17.98■□□□□ 0.47
PPP1CA-208ENST00000532446 GANCQ8TET4 914 aa17.98■□□□□ 0.47
PPP1CA-208ENST00000532446 PEX13Q92968 403 aa17.98■□□□□ 0.47
PPP1CA-208ENST00000532446 FCRL3Q96P31 734 aaPredicted RBP17.98■□□□□ 0.47
PPP1CA-208ENST00000532446 C19orf43Q9BQ61 176 aa17.98■□□□□ 0.47
PPP1CA-208ENST00000532446 ARGLU1Q9NWB6 273 aaPredicted RBP17.98■□□□□ 0.47
PPP1CA-208ENST00000532446 IL17CQ9P0M4 197 aa17.98■□□□□ 0.47
PPP1CA-208ENST00000532446 USP36Q9P275 1121 aaKnown RBP17.98■□□□□ 0.47
PPP1CA-208ENST00000532446 EBF1Q9UH73 591 aa17.98■□□□□ 0.47
PPP1CA-208ENST00000532446 GGT7Q9UJ14 662 aa17.98■□□□□ 0.47
PPP1CA-208ENST00000532446 RPS6KL1Q9Y6S9 549 aa17.98■□□□□ 0.47
PPP1CA-208ENST00000532446 BPTFQ12830 3046 aa17.98■□□□□ 0.47
PPP1CA-208ENST00000532446 ZNF106Q9H2Y7 1883 aaKnown RBP17.97■□□□□ 0.47
PPP1CA-208ENST00000532446 TRPM6Q9BX84 2022 aa17.97■□□□□ 0.47
PPP1CA-208ENST00000532446 ZCWPW2A0A1B0GU75 182 aa17.97■□□□□ 0.47
PPP1CA-208ENST00000532446 H0Y858 1186 aa17.97■□□□□ 0.47
PPP1CA-208ENST00000532446 BUD23O43709 281 aaKnown RBP17.97■□□□□ 0.47
PPP1CA-208ENST00000532446 APBB3O95704 486 aa17.97■□□□□ 0.47
PPP1CA-208ENST00000532446 SSTR1P30872 391 aa17.97■□□□□ 0.47
PPP1CA-208ENST00000532446 CXCL12P48061 93 aa17.97■□□□□ 0.47
PPP1CA-208ENST00000532446 TPMTP51580 245 aa17.97■□□□□ 0.47
PPP1CA-208ENST00000532446 STC1P52823 247 aa17.97■□□□□ 0.47
PPP1CA-208ENST00000532446 ACVR1Q04771 509 aa17.97■□□□□ 0.47
PPP1CA-208ENST00000532446 ARHGEF7Q14155 803 aa17.97■□□□□ 0.47
PPP1CA-208ENST00000532446 PTPRCAPQ14761 206 aa17.97■□□□□ 0.47
PPP1CA-208ENST00000532446 CRYMQ14894 314 aa17.97■□□□□ 0.47
PPP1CA-208ENST00000532446 SPANXN3Q5MJ09 141 aa17.97■□□□□ 0.47
PPP1CA-208ENST00000532446 ESRP1Q6NXG1 681 aaKnown RBP17.97■□□□□ 0.47
PPP1CA-208ENST00000532446 FBXO38Q6PIJ6 1188 aa17.97■□□□□ 0.47
PPP1CA-208ENST00000532446 LIPIQ6XZB0 460 aa17.97■□□□□ 0.47
PPP1CA-208ENST00000532446 BMP8AQ7Z5Y6 402 aa17.97■□□□□ 0.47
PPP1CA-208ENST00000532446 CBARPQ8N350 705 aaPredicted RBP17.97■□□□□ 0.47
PPP1CA-208ENST00000532446 OR13C4Q8NGS5 318 aa17.97■□□□□ 0.47
PPP1CA-208ENST00000532446 OR13J1Q8NGT2 312 aa17.97■□□□□ 0.47
PPP1CA-208ENST00000532446 ZNF669Q96BR6 464 aaPredicted RBP17.97■□□□□ 0.47
PPP1CA-208ENST00000532446 EPB41L4BQ9H329 900 aa17.97■□□□□ 0.47
PPP1CA-208ENST00000532446 ITM2CQ9NQX7 267 aa17.97■□□□□ 0.47
PPP1CA-208ENST00000532446 NLE1Q9NVX2 485 aaPredicted RBP17.97■□□□□ 0.47
PPP1CA-208ENST00000532446 BCCIPQ9P287 314 aaKnown RBP eCLIP17.97■□□□□ 0.47
PPP1CA-208ENST00000532446 SLC2A6Q9UGQ3 507 aa17.97■□□□□ 0.47
PPP1CA-208ENST00000532446 NCKAP1Q9Y2A7 1128 aa17.97■□□□□ 0.47
PPP1CA-208ENST00000532446 FAM169AQ9Y6X4 670 aa17.97■□□□□ 0.47
PPP1CA-208ENST00000532446 RIPK2O43353 540 aa17.96■□□□□ 0.47
PPP1CA-208ENST00000532446 PLRG1O43660 514 aaKnown RBP17.96■□□□□ 0.47
PPP1CA-208ENST00000532446 IGLV3-19P01714 112 aa17.96■□□□□ 0.47
PPP1CA-208ENST00000532446 SLC4A1P02730 911 aa17.96■□□□□ 0.47
PPP1CA-208ENST00000532446 GSTA2P09210 222 aa17.96■□□□□ 0.47
PPP1CA-208ENST00000532446 C1SP09871 688 aa17.96■□□□□ 0.47
PPP1CA-208ENST00000532446 CCR3P51677 355 aa17.96■□□□□ 0.47
PPP1CA-208ENST00000532446 UAP1Q16222 522 aaPredicted RBP17.96■□□□□ 0.47
PPP1CA-208ENST00000532446 SKIDA1Q1XH10 827 aa17.96■□□□□ 0.47
PPP1CA-208ENST00000532446 SPDYCQ5MJ68 293 aa17.96■□□□□ 0.47
PPP1CA-208ENST00000532446 C3orf62Q6ZUJ4 267 aa17.96■□□□□ 0.47
PPP1CA-208ENST00000532446 PGBD3Q8N328 593 aa17.96■□□□□ 0.47
PPP1CA-208ENST00000532446 CAMKK1Q8N5S9 505 aa17.96■□□□□ 0.47
PPP1CA-208ENST00000532446 OR4K2Q8NGD2 314 aa17.96■□□□□ 0.47
PPP1CA-208ENST00000532446 PBXIP1Q96AQ6 731 aa17.96■□□□□ 0.47
PPP1CA-208ENST00000532446 DNAJC1Q96KC8 554 aaKnown RBP17.96■□□□□ 0.47
PPP1CA-208ENST00000532446 CD93Q9NPY3 652 aa17.96■□□□□ 0.47
PPP1CA-208ENST00000532446 PKP3Q9Y446 797 aa17.96■□□□□ 0.47
PPP1CA-208ENST00000532446 CACNA1IQ9P0X4 2223 aa17.96■□□□□ 0.47
PPP1CA-208ENST00000532446 MUC6Q6W4X9 2439 aa17.96■□□□□ 0.47
PPP1CA-208ENST00000532446 PSMD11O00231 422 aa17.95■□□□□ 0.46
PPP1CA-208ENST00000532446 NEMP1O14524 444 aa17.95■□□□□ 0.46
PPP1CA-208ENST00000532446 STX7O15400 261 aaKnown RBP17.95■□□□□ 0.46
PPP1CA-208ENST00000532446 TSPAN6O43657 245 aa17.95■□□□□ 0.46
PPP1CA-208ENST00000532446 SPAG6O75602 509 aa17.95■□□□□ 0.46
PPP1CA-208ENST00000532446 ACSL3O95573 720 aa17.95■□□□□ 0.46
PPP1CA-208ENST00000532446 HSD17B3P37058 310 aa17.95■□□□□ 0.46
PPP1CA-208ENST00000532446 LIG3P49916 1009 aa17.95■□□□□ 0.46
PPP1CA-208ENST00000532446 ADPRHP54922 357 aa17.95■□□□□ 0.46
PPP1CA-208ENST00000532446 FRG1Q14331 258 aaKnown RBP17.95■□□□□ 0.46
PPP1CA-208ENST00000532446 CAPN12Q6ZSI9 719 aa17.95■□□□□ 0.46
PPP1CA-208ENST00000532446 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.95■□□□□ 0.46
PPP1CA-208ENST00000532446 GSDMBQ8TAX9 411 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms