RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 COL28A1Q2UY09 1125 aa4.53□□□□□ -1.68
USP47-211ENST00000531513 CXorf66Q5JRM2 361 aaPredicted RBP4.53□□□□□ -1.68
USP47-211ENST00000531513 SLC10A5Q5PT55 438 aa4.53□□□□□ -1.68
USP47-211ENST00000531513 PMS2CLQ68D20 193 aa4.53□□□□□ -1.68
USP47-211ENST00000531513 DLK2Q6UY11 383 aa4.53□□□□□ -1.68
USP47-211ENST00000531513 CCDC186Q7Z3E2 898 aa4.53□□□□□ -1.68
USP47-211ENST00000531513 WDR5BQ86VZ2 330 aa4.53□□□□□ -1.68
USP47-211ENST00000531513 TDRPQ86YL5 185 aa4.53□□□□□ -1.68
USP47-211ENST00000531513 CEP97Q8IW35 865 aa4.53□□□□□ -1.68
USP47-211ENST00000531513 KIAA2013Q8IYS2 634 aa4.53□□□□□ -1.68
USP47-211ENST00000531513 AFAP1L1Q8TED9 768 aa4.53□□□□□ -1.68
USP47-211ENST00000531513 IGFBPL1Q8WX77 278 aa4.53□□□□□ -1.68
USP47-211ENST00000531513 TMCO6Q96DC7 493 aa4.53□□□□□ -1.68
USP47-211ENST00000531513 ARHGEF26Q96DR7 871 aa4.53□□□□□ -1.68
USP47-211ENST00000531513 TMEM68Q96MH6 324 aa4.53□□□□□ -1.68
USP47-211ENST00000531513 BBS4Q96RK4 519 aa4.53□□□□□ -1.68
USP47-211ENST00000531513 NUF2Q9BZD4 464 aa4.53□□□□□ -1.68
USP47-211ENST00000531513 PLK3Q9H4B4 646 aa4.53□□□□□ -1.68
USP47-211ENST00000531513 OPA3Q9H6K4 179 aa4.53□□□□□ -1.68
USP47-211ENST00000531513 ARHGEF38Q9NXL2 777 aa4.53□□□□□ -1.68
USP47-211ENST00000531513 WDR35Q9P2L0 1181 aa4.53□□□□□ -1.68
USP47-211ENST00000531513 PPIEQ9UNP9 301 aaKnown RBP4.53□□□□□ -1.68
USP47-211ENST00000531513 CARD8Q9Y2G2 431 aa4.53□□□□□ -1.68
USP47-211ENST00000531513 AAR2Q9Y312 384 aaKnown RBP4.53□□□□□ -1.68
USP47-211ENST00000531513 LOC100509620A0A075B734 347 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.52□□□□□ -1.69
USP47-211ENST00000531513 BICDL2A1A5D9 508 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 CXorf65A6NEN9 183 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 PI4K2BG5E9Z4 385 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 H0Y626 953 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 MSI1O43347 362 aaKnown RBP4.52□□□□□ -1.69
USP47-211ENST00000531513 SMAD6O43541 496 aaKnown RBP4.52□□□□□ -1.69
USP47-211ENST00000531513 KIF1CO43896 1103 aaKnown RBP4.52□□□□□ -1.69
USP47-211ENST00000531513 TLR2O60603 784 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 MITFO75030 526 aaPredicted RBP4.52□□□□□ -1.69
USP47-211ENST00000531513 PSMD10O75832 226 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 NKX2-2O95096 273 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 SRPRAP08240 638 aaKnown RBP4.52□□□□□ -1.69
USP47-211ENST00000531513 MYBL1P10243 752 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 ITGAXP20702 1163 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 PON1P27169 355 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 YWHAQP27348 245 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 CHRNA5P30532 468 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 PIK3CAP42336 1068 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 CENPAP49450 140 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 RBP5P82980 135 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 ID2Q02363 134 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 CFHR1Q03591 330 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 SLC18A2Q05940 514 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 BFSP1Q12934 665 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 DRAP1Q14919 205 aaPredicted RBP4.52□□□□□ -1.69
USP47-211ENST00000531513 CRY2Q49AN0 593 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 SOWAHCQ53LP3 525 aaPredicted RBP4.52□□□□□ -1.69
USP47-211ENST00000531513 ZNF628Q5EBL2 1059 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 DCLRE1AQ6PJP8 1040 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 DEF8Q6ZN54 512 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 CFAP77Q6ZQR2 320 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 CHST3Q7LGC8 479 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 TBC1D26Q86UD7 250 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 THNSL1Q8IYQ7 743 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 MINDY1Q8N5J2 469 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 RBMXL3Q8N7X1 1067 aaKnown RBP4.52□□□□□ -1.69
USP47-211ENST00000531513 OR4N2Q8NGD1 307 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 DUSP19Q8WTR2 217 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 KAT2BQ92831 832 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 LRRC59Q96AG4 307 aaKnown RBP4.52□□□□□ -1.69
USP47-211ENST00000531513 RMDN1Q96DB5 314 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 ELMOD3Q96FG2 381 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 ANKRD2Q9GZV1 360 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 HIPK3Q9H422 1215 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 RETREG1Q9H6L5 497 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 XAB2Q9HCS7 855 aaKnown RBP4.52□□□□□ -1.69
USP47-211ENST00000531513 SETD4Q9NVD3 440 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 SELENONQ9NZV5 590 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 RASAL2Q9UJF2 1139 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 ANAPC2Q9UJX6 822 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 MAFFQ9ULX9 164 aa4.52□□□□□ -1.69
USP47-211ENST00000531513 LSM4Q9Y4Z0 139 aaKnown RBP4.52□□□□□ -1.69
USP47-211ENST00000531513 ZNF644Q9H582 1327 aaPredicted RBP4.51□□□□□ -1.69
USP47-211ENST00000531513 EBAG9O00559 213 aa4.51□□□□□ -1.69
USP47-211ENST00000531513 SLC25A17O43808 307 aa4.51□□□□□ -1.69
USP47-211ENST00000531513 CNOT3O75175 753 aaKnown RBP4.51□□□□□ -1.69
USP47-211ENST00000531513 NFATC1O95644 943 aa4.51□□□□□ -1.69
USP47-211ENST00000531513 ABCB1P08183 1280 aaPredicted RBP4.51□□□□□ -1.69
USP47-211ENST00000531513 IL7RP16871 459 aa4.51□□□□□ -1.69
USP47-211ENST00000531513 ZNF182P17025 639 aaPredicted RBP4.51□□□□□ -1.69
USP47-211ENST00000531513 TRIM21P19474 475 aaKnown RBP4.51□□□□□ -1.69
USP47-211ENST00000531513 KLRC2P26717 231 aa4.51□□□□□ -1.69
USP47-211ENST00000531513 RYKP34925 604 aa4.51□□□□□ -1.69
USP47-211ENST00000531513 PNLIPRP2P54317 469 aa4.51□□□□□ -1.69
USP47-211ENST00000531513 MTA1Q13330 715 aa4.51□□□□□ -1.69
USP47-211ENST00000531513 GALNT3Q14435 633 aa4.51□□□□□ -1.69
USP47-211ENST00000531513 NAB2Q15742 525 aa4.51□□□□□ -1.69
USP47-211ENST00000531513 ADIPOQQ15848 244 aa4.51□□□□□ -1.69
USP47-211ENST00000531513 PCGF3Q3KNV8 242 aa4.51□□□□□ -1.69
USP47-211ENST00000531513 KIAA1755Q5JYT7 1200 aa4.51□□□□□ -1.69
USP47-211ENST00000531513 KRT79Q5XKE5 535 aa4.51□□□□□ -1.69
USP47-211ENST00000531513 RBM44Q6ZP01 1051 aaKnown RBP4.51□□□□□ -1.69
USP47-211ENST00000531513 TRIM74Q86UV6 250 aa4.51□□□□□ -1.69
USP47-211ENST00000531513 TRIM73Q86UV7 250 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms