RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 RNF114Q9Y508 228 aa7.13□□□□□ -1.27
TRIM53CP-201ENST00000531490 PCDHB1Q9Y5F3 818 aa7.13□□□□□ -1.27
TRIM53CP-201ENST00000531490 COL6A6A6NMZ7 2263 aa7.13□□□□□ -1.27
TRIM53CP-201ENST00000531490 SPTAN1Q13813 2472 aaKnown RBP7.13□□□□□ -1.27
TRIM53CP-201ENST00000531490 BOD1L1Q8NFC6 3051 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 TLN1Q9Y490 2541 aaKnown RBP7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 TYW5A2RUC4 315 aaKnown RBP7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 K7ERQ8 282 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 RNF103O00237 685 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 NPC1O15118 1278 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 CLDN11O75508 207 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 ITGAVP06756 1048 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 TCF4P15884 667 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 OR1E1P30953 314 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 METAP1P53582 386 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 C21orf59P57076 290 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 TBC1D25Q3MII6 688 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 TDRD12Q587J7 1177 aaKnown RBP7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 SPECC1LQ69YQ0 1117 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 DCUN1D2Q6PH85 259 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 LRRC31Q6UY01 552 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 LINGO4Q6UY18 593 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 TMC6Q7Z403 805 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 SLFN11Q7Z7L1 901 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 VSTM4Q8IW00 320 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 CCDC117Q8IWD4 279 aaPredicted RBP7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 DRC7Q8IY82 874 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 OR7D4Q8NG98 312 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 OR8K1Q8NGG5 319 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 SAP25Q8TEE9 199 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 FRS2Q8WU20 508 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 PEBP4Q96S96 227 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 LGMNQ99538 433 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 ELF4Q99607 663 aaPredicted RBP7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 CNPY3Q9BT09 278 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 BTBD1Q9H0C5 482 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 THAP2Q9H0W7 228 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 OSBPL2Q9H1P3 480 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 PARVAQ9NVD7 372 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 GPATCH2LQ9NWQ4 482 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 SERGEFQ9UGK8 458 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 PCSK1NQ9UHG2 260 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 DNAI1Q9UI46 699 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 FZD10Q9ULW2 581 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 NEU3Q9UQ49 428 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 PCDHGA1Q9Y5H4 931 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 ITIH6Q6UXX5 1313 aa7.12□□□□□ -1.27
TRIM53CP-201ENST00000531490 UBR5O95071 2799 aaPredicted RBP7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 B8ZZF3 427 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 VILLO15195 856 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 SMAD6O43541 496 aaKnown RBP7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 SLC28A2O43868 658 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 MOCS3O95396 460 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 CD160O95971 181 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 MPOP05164 745 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 RHOCP08134 193 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 SRPRAP08240 638 aaKnown RBP7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 PSMA2P25787 234 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 HNRNPH3P31942 346 aaKnown RBP7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 ACVRL1P37023 503 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 GALCP54803 685 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 ST8SIA6P61647 398 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 SRSF1Q07955 248 aaKnown RBP eCLIP7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 TBX2Q13207 712 aaPredicted RBP7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 SLC12A1Q13621 1099 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 DLG2Q15700 870 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 CA9Q16790 459 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 ASTE1Q2TB18 679 aaPredicted RBP7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 HNRNPA1L2Q32P51 320 aaKnown RBP7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 ACCSLQ4AC99 568 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 CCDC122Q5T0U0 273 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 MANEALQ5VSG8 457 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 RWDD4Q6NW29 188 aaKnown RBP7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 ALKBH5Q6P6C2 394 aaKnown RBP7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 NCEH1Q6PIU2 408 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 KDM7AQ6ZMT4 941 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 CYP4V2Q6ZWL3 525 aaPredicted RBP7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 THAP5Q7Z6K1 395 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 ATG4DQ86TL0 474 aaPredicted RBP7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 NLRP14Q86W24 1093 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 CPNE8Q86YQ8 564 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 STK40Q8N2I9 435 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 NETO2Q8NC67 525 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 PIWIL2Q8TC59 973 aaKnown RBP7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 GANCQ8TET4 914 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 UBE2FQ969M7 185 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 ZNF653Q96CK0 615 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 ARHGEF26Q96DR7 871 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 DNAJC7Q99615 494 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 SPON2Q9BUD6 331 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 PACSIN1Q9BY11 444 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 ACE2Q9BYF1 805 aaPredicted RBP7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 ZYG11BQ9C0D3 744 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 PCED1AQ9H1Q7 454 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 NOL6Q9H6R4 1146 aaKnown RBP7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 CARS2Q9HA77 564 aaKnown RBP7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 UBP1Q9NZI7 540 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 PPARGC1AQ9UBK2 798 aaKnown RBP7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 SUN2Q9UH99 717 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms