RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 MAPK10P53779 464 aa9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 MAZP56270 477 aaKnown RBP9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 KIAA1024LP59773 190 aa9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 BPIFB4P59827 614 aa9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 MTM1Q13496 603 aa9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 C14orf28Q4W4Y0 310 aa9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 VWA3BQ502W6 1294 aa9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 INO80DQ53TQ3 878 aaPredicted RBP9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 CLEC18BQ6UXF7 455 aa9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 SYT10Q6XYQ8 523 aa9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 STRADAQ7RTN6 431 aa9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 ZNF438Q7Z4V0 828 aa9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 GKN2Q86XP6 184 aa9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 NRROSQ86YC3 692 aa9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 CAMK1DQ8IU85 385 aa9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 REXO1L1PQ8IX06 675 aa9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 FAM26EQ8N5C1 309 aa9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 CLEC18CQ8NCF0 446 aa9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 RCBTB1Q8NDN9 531 aa9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 FAM172AQ8WUF8 416 aa9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 NTAN1Q96AB6 310 aa9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 WDR92Q96MX6 357 aa9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 PCDHB18PQ96TA0 734 aa9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 NUDT22Q9BRQ3 303 aa9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 C11orf70Q9BRQ4 267 aa9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 C1QTNF7Q9BXJ2 289 aa9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 GANQ9H2C0 597 aa9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 RETREG1Q9H6L5 497 aa9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 SPATS2LQ9NUQ6 558 aaKnown RBP9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 LRIT1Q9P2V4 623 aa9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.24□□□□□ -0.937e-8■■■■□ 21
CHMP4A-205ENST00000531158 TNRC6AQ8NDV7 1962 aaKnown RBP9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 PRRC2CQ9Y520 2896 aaKnown RBP9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 ITPR3Q14573 2671 aa9.24□□□□□ -0.93
CHMP4A-205ENST00000531158 IGHV5-10-1A0A0J9YXX1 117 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 A0A1W2PQC6 194 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 ZSCAN5CA6NGD5 496 aaPredicted RBP9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 LRRC10BA6NIK2 292 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 TMEM110-MUSTN1A8MSY1 372 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 B4DGG1 531 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 TMX2-CTNND1H3BSU7 103 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 J3KR12 359 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 NUDT21O43809 227 aaKnown RBP9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 CCDC175P0C221 793 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 FGF3P11487 239 aaPredicted RBP9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 UNGP13051 313 aaPredicted RBP9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 EPHB2P29323 1055 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 SDC4P31431 198 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 TRIM23P36406 574 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 OR1D5P58170 312 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 CDR2Q01850 454 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 ELP6Q0PNE2 266 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 NR1D2Q14995 579 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 EFHC2Q5JST6 749 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 MANEAQ5SRI9 462 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 PHF19Q5T6S3 580 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 XKR5Q6UX68 686 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 UMODL1-AS1Q8N2C9 162 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 FAM46DQ8NEK8 389 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 OR56A4Q8NGH8 313 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 PATE1Q8WXA2 126 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 SCG3Q8WXD2 468 aaKnown RBP9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 CASKIN2Q8WXE0 1202 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 NKD1Q969G9 470 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 ECHDC3Q96DC8 303 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 TUBGCP2Q9BSJ2 902 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 EPN3Q9H201 632 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 SUV39H2Q9H5I1 410 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 LRRC19Q9H756 370 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 TMEM51Q9NW97 253 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 GEMIN8Q9NWZ8 242 aaKnown RBP9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 PLEKHB1Q9UF11 243 aaPredicted RBP9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 HPCAL4Q9UM19 191 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 ATP8A1Q9Y2Q0 1164 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 DAAM1Q9Y4D1 1078 aa9.23□□□□□ -0.93
CHMP4A-205ENST00000531158 SHANK1Q9Y566 2161 aa9.22□□□□□ -0.93
CHMP4A-205ENST00000531158 WASH4PA8MWX3 477 aa9.22□□□□□ -0.93
CHMP4A-205ENST00000531158 TRAFD1O14545 582 aaPredicted RBP9.22□□□□□ -0.93
CHMP4A-205ENST00000531158 PPFIA2O75334 1257 aa9.22□□□□□ -0.93
CHMP4A-205ENST00000531158 RECQL5O94762 991 aaPredicted RBP9.22□□□□□ -0.93
CHMP4A-205ENST00000531158 GFPT2O94808 682 aa9.22□□□□□ -0.93
CHMP4A-205ENST00000531158 TNFP01375 233 aa9.22□□□□□ -0.93
CHMP4A-205ENST00000531158 LIFP15018 202 aa9.22□□□□□ -0.93
CHMP4A-205ENST00000531158 EEF1GP26641 437 aaKnown RBP9.22□□□□□ -0.93
CHMP4A-205ENST00000531158 HTR1BP28222 390 aa9.22□□□□□ -0.93
CHMP4A-205ENST00000531158 CD1CP29017 333 aa9.22□□□□□ -0.93
CHMP4A-205ENST00000531158 CSF2RBP32927 897 aa9.22□□□□□ -0.93
CHMP4A-205ENST00000531158 SUOXP51687 545 aa9.22□□□□□ -0.93
CHMP4A-205ENST00000531158 COPB1P53618 953 aaKnown RBP9.22□□□□□ -0.93
CHMP4A-205ENST00000531158 JAM2P57087 298 aa9.22□□□□□ -0.93
CHMP4A-205ENST00000531158 TUBB2AQ13885 445 aa9.22□□□□□ -0.93
CHMP4A-205ENST00000531158 KRT31Q15323 416 aa9.22□□□□□ -0.93
CHMP4A-205ENST00000531158 IGFBP7Q16270 282 aa9.22□□□□□ -0.93
CHMP4A-205ENST00000531158 SKIDA1Q1XH10 827 aa9.22□□□□□ -0.93
CHMP4A-205ENST00000531158 WDR59Q6PJI9 974 aa9.22□□□□□ -0.93
CHMP4A-205ENST00000531158 LIPIQ6XZB0 460 aa9.22□□□□□ -0.93
CHMP4A-205ENST00000531158 ARHGAP36Q6ZRI8 547 aa9.22□□□□□ -0.93
CHMP4A-205ENST00000531158 TAF8Q7Z7C8 310 aa9.22□□□□□ -0.93
CHMP4A-205ENST00000531158 SLFN11Q7Z7L1 901 aa9.22□□□□□ -0.93
CHMP4A-205ENST00000531158 DNAAF5Q86Y56 855 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms