RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 RP1P56715 2156 aa15.83■□□□□ 0.13
CHMP4A-204ENST00000530996 LRRC53A6NM62 1247 aa15.83■□□□□ 0.12
CHMP4A-204ENST00000530996 TRAFD1O14545 582 aaPredicted RBP15.83■□□□□ 0.12
CHMP4A-204ENST00000530996 ZW10O43264 779 aa15.83■□□□□ 0.12
CHMP4A-204ENST00000530996 CYP2A6P11509 494 aaPredicted RBP15.83■□□□□ 0.12
CHMP4A-204ENST00000530996 CCNB1P14635 433 aa15.83■□□□□ 0.12
CHMP4A-204ENST00000530996 PNLIPP16233 465 aa15.83■□□□□ 0.12
CHMP4A-204ENST00000530996 VIPR1P32241 457 aa15.83■□□□□ 0.12
CHMP4A-204ENST00000530996 ARL4AP40617 200 aa15.83■□□□□ 0.12
CHMP4A-204ENST00000530996 ETV5P41161 510 aa15.83■□□□□ 0.12
CHMP4A-204ENST00000530996 CNGA3Q16281 694 aa15.83■□□□□ 0.12
CHMP4A-204ENST00000530996 SMTNL2Q2TAL5 461 aa15.83■□□□□ 0.12
CHMP4A-204ENST00000530996 TMEM164Q5U3C3 297 aa15.83■□□□□ 0.12
CHMP4A-204ENST00000530996 PLEKHA7Q6IQ23 1121 aa15.83■□□□□ 0.12
CHMP4A-204ENST00000530996 TMCO3Q6UWJ1 677 aa15.83■□□□□ 0.12
CHMP4A-204ENST00000530996 PIM3Q86V86 326 aa15.83■□□□□ 0.12
CHMP4A-204ENST00000530996 SLITRK4Q8IW52 837 aa15.83■□□□□ 0.12
CHMP4A-204ENST00000530996 PELI3Q8N2H9 469 aa15.83■□□□□ 0.12
CHMP4A-204ENST00000530996 NSMCE1Q8WV22 266 aa15.83■□□□□ 0.12
CHMP4A-204ENST00000530996 HSPH1Q92598 858 aa15.83■□□□□ 0.12
CHMP4A-204ENST00000530996 PSKH2Q96QS6 385 aa15.83■□□□□ 0.12
CHMP4A-204ENST00000530996 TRIM7Q9C029 511 aa15.83■□□□□ 0.12
CHMP4A-204ENST00000530996 TRIM4Q9C037 500 aa15.83■□□□□ 0.12
CHMP4A-204ENST00000530996 SEMA6CQ9H3T2 930 aa15.83■□□□□ 0.12
CHMP4A-204ENST00000530996 MYO1AQ9UBC5 1043 aa15.83■□□□□ 0.12
CHMP4A-204ENST00000530996 ACSL6Q9UKU0 697 aa15.83■□□□□ 0.12
CHMP4A-204ENST00000530996 PCDHGC4Q9Y5F7 938 aa15.83■□□□□ 0.12
CHMP4A-204ENST00000530996 PCDHGA4Q9Y5G9 962 aa15.83■□□□□ 0.12
CHMP4A-204ENST00000530996 SCINQ9Y6U3 715 aa15.83■□□□□ 0.12
CHMP4A-204ENST00000530996 SOCS5O75159 536 aa15.82■□□□□ 0.12
CHMP4A-204ENST00000530996 CPNE6O95741 557 aa15.82■□□□□ 0.12
CHMP4A-204ENST00000530996 HOXC4P09017 264 aaPredicted RBP15.82■□□□□ 0.12
CHMP4A-204ENST00000530996 GM2AP17900 193 aa15.82■□□□□ 0.12
CHMP4A-204ENST00000530996 TRIM23P36406 574 aa15.82■□□□□ 0.12
CHMP4A-204ENST00000530996 HSPA9P38646 679 aaKnown RBP15.82■□□□□ 0.12
CHMP4A-204ENST00000530996 ETV3P41162 512 aa15.82■□□□□ 0.12
CHMP4A-204ENST00000530996 ZNF135P52742 658 aaPredicted RBP15.82■□□□□ 0.12
CHMP4A-204ENST00000530996 OR1D5P58170 312 aa15.82■□□□□ 0.12
CHMP4A-204ENST00000530996 ZFP36L1Q07352 338 aaKnown RBP15.82■□□□□ 0.12
CHMP4A-204ENST00000530996 NSUN2Q08J23 767 aaKnown RBP eCLIP15.82■□□□□ 0.12
CHMP4A-204ENST00000530996 SLC10A7Q0GE19 358 aa15.82■□□□□ 0.12
CHMP4A-204ENST00000530996 OGFOD3Q6PK18 319 aa15.82■□□□□ 0.12
CHMP4A-204ENST00000530996 RBM43Q6ZSC3 357 aaKnown RBP15.82■□□□□ 0.12
CHMP4A-204ENST00000530996 USP45Q70EL2 814 aa15.82■□□□□ 0.12
CHMP4A-204ENST00000530996 TMPRSS9Q7Z410 1059 aa15.82■□□□□ 0.12
CHMP4A-204ENST00000530996 TP53INP2Q8IXH6 220 aa15.82■□□□□ 0.12
CHMP4A-204ENST00000530996 LZTR1Q8N653 840 aa15.82■□□□□ 0.12
CHMP4A-204ENST00000530996 JPH3Q8WXH2 748 aaPredicted RBP15.82■□□□□ 0.12
CHMP4A-204ENST00000530996 COQ10AQ96MF6 247 aa15.82■□□□□ 0.12
CHMP4A-204ENST00000530996 ZNF599Q96NL3 588 aa15.82■□□□□ 0.12
CHMP4A-204ENST00000530996 GBP4Q96PP9 640 aa15.82■□□□□ 0.12
CHMP4A-204ENST00000530996 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.82■□□□□ 0.12
CHMP4A-204ENST00000530996 CWC15Q9P013 229 aaKnown RBP15.82■□□□□ 0.12
CHMP4A-204ENST00000530996 TAAR2Q9P1P5 351 aa15.82■□□□□ 0.12
CHMP4A-204ENST00000530996 CNOT8Q9UFF9 292 aaKnown RBP15.82■□□□□ 0.12
CHMP4A-204ENST00000530996 SUFUQ9UMX1 484 aa15.82■□□□□ 0.12
CHMP4A-204ENST00000530996 LRP4O75096 1905 aa15.82■□□□□ 0.12
CHMP4A-204ENST00000530996 A0A1W2PQ67 120 aa15.81■□□□□ 0.12
CHMP4A-204ENST00000530996 TMEM191CA6NGB0 347 aa15.81■□□□□ 0.12
CHMP4A-204ENST00000530996 LRCH4O75427 683 aa15.81■□□□□ 0.12
CHMP4A-204ENST00000530996 HEXIM1O94992 359 aaKnown RBP15.81■□□□□ 0.12
CHMP4A-204ENST00000530996 FAM87AP0C7U9 286 aa15.81■□□□□ 0.12
CHMP4A-204ENST00000530996 ATP1A3P13637 1013 aa15.81■□□□□ 0.12
CHMP4A-204ENST00000530996 AK4P27144 223 aaPredicted RBP15.81■□□□□ 0.12
CHMP4A-204ENST00000530996 MAXP61244 160 aa15.81■□□□□ 0.12
CHMP4A-204ENST00000530996 CDK3Q00526 305 aa15.81■□□□□ 0.12
CHMP4A-204ENST00000530996 DPYSQ14117 519 aa15.81■□□□□ 0.12
CHMP4A-204ENST00000530996 C16orf72Q14CZ0 275 aa15.81■□□□□ 0.12
CHMP4A-204ENST00000530996 PSTKQ8IV42 348 aaKnown RBP15.81■□□□□ 0.12
CHMP4A-204ENST00000530996 ARFGAP1Q8N6T3 406 aa15.81■□□□□ 0.12
CHMP4A-204ENST00000530996 EXD3Q8N9H8 876 aa15.81■□□□□ 0.12
CHMP4A-204ENST00000530996 RCBTB1Q8NDN9 531 aa15.81■□□□□ 0.12
CHMP4A-204ENST00000530996 TRIM11Q96F44 468 aa15.81■□□□□ 0.12
CHMP4A-204ENST00000530996 DTD2Q96FN9 168 aa15.81■□□□□ 0.12
CHMP4A-204ENST00000530996 CCDC74BQ96LY2 380 aa15.81■□□□□ 0.12
CHMP4A-204ENST00000530996 NUDT22Q9BRQ3 303 aa15.81■□□□□ 0.12
CHMP4A-204ENST00000530996 CDH19Q9H159 772 aa15.81■□□□□ 0.12
CHMP4A-204ENST00000530996 SPATS2LQ9NUQ6 558 aaKnown RBP15.81■□□□□ 0.12
CHMP4A-204ENST00000530996 MYO6Q9UM54 1294 aa15.81■□□□□ 0.12
CHMP4A-204ENST00000530996 ANKRD36A6QL64 1941 aa15.8■□□□□ 0.12
CHMP4A-204ENST00000530996 TENM4Q6N022 2769 aa15.8■□□□□ 0.12
CHMP4A-204ENST00000530996 A0A1W2PQC6 194 aa15.8■□□□□ 0.12
CHMP4A-204ENST00000530996 NPIPB15A6NHN6 443 aaPredicted RBP15.8■□□□□ 0.12
CHMP4A-204ENST00000530996 GOLGA6L22H0YM25 854 aa15.8■□□□□ 0.12
CHMP4A-204ENST00000530996 ECEL1O95672 775 aa15.8■□□□□ 0.12
CHMP4A-204ENST00000530996 FTLP02792 175 aaPredicted RBP15.8■□□□□ 0.12
CHMP4A-204ENST00000530996 ITGB2P05107 769 aa15.8■□□□□ 0.12
CHMP4A-204ENST00000530996 CD82P27701 267 aa15.8■□□□□ 0.12
CHMP4A-204ENST00000530996 SERPINB6P35237 376 aa15.8■□□□□ 0.12
CHMP4A-204ENST00000530996 ACTR1BP42025 376 aa15.8■□□□□ 0.12
CHMP4A-204ENST00000530996 ATP1A2P50993 1020 aa15.8■□□□□ 0.12
CHMP4A-204ENST00000530996 ACTR1AP61163 376 aa15.8■□□□□ 0.12
CHMP4A-204ENST00000530996 KCNC4Q03721 635 aa15.8■□□□□ 0.12
CHMP4A-204ENST00000530996 KLHL30Q0D2K2 578 aa15.8■□□□□ 0.12
CHMP4A-204ENST00000530996 TRAF2Q12933 501 aa15.8■□□□□ 0.12
CHMP4A-204ENST00000530996 PEX6Q13608 980 aa15.8■□□□□ 0.12
CHMP4A-204ENST00000530996 CYP4V2Q6ZWL3 525 aaPredicted RBP15.8■□□□□ 0.12
CHMP4A-204ENST00000530996 HSD11B1LQ7Z5J1 315 aa15.8■□□□□ 0.12
CHMP4A-204ENST00000530996 IRF2BP2Q7Z5L9 587 aa15.8■□□□□ 0.12
CHMP4A-204ENST00000530996 CCDC112Q8NEF3 446 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms