RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 GNA12Q03113 381 aa17.22■□□□□ 0.35
BRCA2-204ENST00000530893 FASTKQ14296 549 aaKnown RBP17.22■□□□□ 0.35
BRCA2-204ENST00000530893 LRRC36Q1X8D7 754 aa17.22■□□□□ 0.35
BRCA2-204ENST00000530893 ZNF549Q6P9A3 640 aa17.22■□□□□ 0.35
BRCA2-204ENST00000530893 PDZD8Q8NEN9 1154 aa17.22■□□□□ 0.35
BRCA2-204ENST00000530893 OVCA2Q8WZ82 227 aa17.22■□□□□ 0.35
BRCA2-204ENST00000530893 ASB9Q96DX5 294 aa17.22■□□□□ 0.35
BRCA2-204ENST00000530893 LRGUKQ96M69 825 aa17.22■□□□□ 0.35
BRCA2-204ENST00000530893 NPAS2Q99743 824 aa17.22■□□□□ 0.35
BRCA2-204ENST00000530893 SLC25A23Q9BV35 468 aa17.22■□□□□ 0.35
BRCA2-204ENST00000530893 UNC93B1Q9H1C4 597 aa17.22■□□□□ 0.35
BRCA2-204ENST00000530893 SYTL2Q9HCH5 934 aa17.22■□□□□ 0.35
BRCA2-204ENST00000530893 STARD7Q9NQZ5 370 aa17.22■□□□□ 0.35
BRCA2-204ENST00000530893 SUCOQ9UBS9 1254 aaKnown RBP17.22■□□□□ 0.35
BRCA2-204ENST00000530893 ABT1Q9ULW3 272 aaKnown RBP17.22■□□□□ 0.35
BRCA2-204ENST00000530893 A0A1W2PQ45 241 aaPredicted RBP17.21■□□□□ 0.35
BRCA2-204ENST00000530893 A0A1W2PQY0 241 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 SLC38A8A6NNN8 435 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 CCL22O00626 93 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 ACOT8O14734 319 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 TRPA1O75762 1119 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 VCLP18206 1134 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 PSMA3P25788 255 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 HOXD9P28356 352 aaPredicted RBP17.21■□□□□ 0.35
BRCA2-204ENST00000530893 HOXD10P28358 340 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 DPP6P42658 865 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 SLC11A1P49279 550 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 AQP4P55087 323 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 NAA20P61599 178 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 IRX1P78414 480 aaPredicted RBP17.21■□□□□ 0.35
BRCA2-204ENST00000530893 DUSP4Q13115 394 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 KLHDC10Q6PID8 442 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 HACD2Q6Y1H2 254 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 LARP4Q71RC2 724 aaKnown RBP eCLIP17.21■□□□□ 0.35
BRCA2-204ENST00000530893 PIM3Q86V86 326 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 B3GALT6Q96L58 329 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 TCF12Q99081 682 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 AARSD1Q9BTE6 412 aaKnown RBP17.21■□□□□ 0.35
BRCA2-204ENST00000530893 MRPL9Q9BYD2 267 aaKnown RBP17.21■□□□□ 0.35
BRCA2-204ENST00000530893 NLE1Q9NVX2 485 aaPredicted RBP17.21■□□□□ 0.35
BRCA2-204ENST00000530893 POLR3BQ9NW08 1133 aaPredicted RBP17.21■□□□□ 0.35
BRCA2-204ENST00000530893 SRRDQ9UH36 339 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 FIS1Q9Y3D6 152 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 DTNAQ9Y4J8 743 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 ANKRD36A6QL64 1941 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 UBFD1O14562 309 aaKnown RBP17.21■□□□□ 0.35
BRCA2-204ENST00000530893 SNRPB2P08579 225 aaKnown RBP17.21■□□□□ 0.35
BRCA2-204ENST00000530893 UBTFL6P0CB48 400 aaPredicted RBP17.21■□□□□ 0.35
BRCA2-204ENST00000530893 PMLP29590 882 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 KCNC1P48547 511 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 PKNOX1P55347 436 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 CAP1Q01518 475 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 LRP8Q14114 963 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 GALNT3Q14435 633 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 MMEL1Q495T6 779 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 UNC50Q53HI1 259 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 RSPO2Q6UXX9 243 aaPredicted RBP17.21■□□□□ 0.35
BRCA2-204ENST00000530893 GK5Q6ZS86 529 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 BHLHE22Q8NFJ8 381 aaPredicted RBP17.21■□□□□ 0.35
BRCA2-204ENST00000530893 ADCY4Q8NFM4 1077 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 RIN3Q8TB24 985 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 PTERQ96BW5 349 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 TMA16Q96EY4 203 aaKnown RBP17.21■□□□□ 0.35
BRCA2-204ENST00000530893 MYEOVQ96EZ4 313 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 CDKN2AIPNLQ96HQ2 116 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 TNFRSF12AQ9NP84 129 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 CACNA2D2Q9NY47 1150 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 PCDHGA7Q9Y5G6 932 aa17.21■□□□□ 0.35
BRCA2-204ENST00000530893 KDELR3O43731 214 aa17.2■□□□□ 0.34
BRCA2-204ENST00000530893 CLDN11O75508 207 aa17.2■□□□□ 0.34
BRCA2-204ENST00000530893 KCNQ1P51787 676 aa17.2■□□□□ 0.34
BRCA2-204ENST00000530893 PSME3P61289 254 aa17.2■□□□□ 0.34
BRCA2-204ENST00000530893 MRPS22P82650 360 aaKnown RBP17.2■□□□□ 0.34
BRCA2-204ENST00000530893 TIAL1Q01085 375 aaKnown RBP eCLIP17.2■□□□□ 0.34
BRCA2-204ENST00000530893 MS4A2Q01362 244 aa17.2■□□□□ 0.34
BRCA2-204ENST00000530893 PDAP1Q13442 181 aaKnown RBP17.2■□□□□ 0.34
BRCA2-204ENST00000530893 ADGRE1Q14246 886 aa17.2■□□□□ 0.34
BRCA2-204ENST00000530893 GRAMD1BQ3KR37 738 aa17.2■□□□□ 0.34
BRCA2-204ENST00000530893 RTP2Q5QGT7 225 aa17.2■□□□□ 0.34
BRCA2-204ENST00000530893 IL31Q6EBC2 164 aa17.2■□□□□ 0.34
BRCA2-204ENST00000530893 MFN1Q8IWA4 741 aa17.2■□□□□ 0.34
BRCA2-204ENST00000530893 OR52K2Q8NGK3 314 aa17.2■□□□□ 0.34
BRCA2-204ENST00000530893 OR13C4Q8NGS5 318 aa17.2■□□□□ 0.34
BRCA2-204ENST00000530893 USP13Q92995 863 aaPredicted RBP17.2■□□□□ 0.34
BRCA2-204ENST00000530893 C19orf60Q96EN9 201 aa17.2■□□□□ 0.34
BRCA2-204ENST00000530893 TTPALQ9BTX7 342 aa17.2■□□□□ 0.34
BRCA2-204ENST00000530893 CINPQ9BW66 212 aaPredicted RBP17.2■□□□□ 0.34
BRCA2-204ENST00000530893 SEZ6LQ9BYH1 1024 aa17.2■□□□□ 0.34
BRCA2-204ENST00000530893 Q9H521 79 aa17.2■□□□□ 0.34
BRCA2-204ENST00000530893 UBA2Q9UBT2 640 aaPredicted RBP17.2■□□□□ 0.34
BRCA2-204ENST00000530893 VPS9D1Q9Y2B5 631 aa17.2■□□□□ 0.34
BRCA2-204ENST00000530893 ARVCFO00192 962 aa17.2■□□□□ 0.34
BRCA2-204ENST00000530893 RNASEH1O60930 286 aaKnown RBP17.2■□□□□ 0.34
BRCA2-204ENST00000530893 CAPNS1P04632 268 aa17.2■□□□□ 0.34
BRCA2-204ENST00000530893 ATF6P18850 670 aa17.2■□□□□ 0.34
BRCA2-204ENST00000530893 CLCN2P51788 898 aa17.2■□□□□ 0.34
BRCA2-204ENST00000530893 ZNF140P52738 457 aaPredicted RBP17.2■□□□□ 0.34
BRCA2-204ENST00000530893 STX1BP61266 288 aa17.2■□□□□ 0.34
BRCA2-204ENST00000530893 TRAP1Q12931 704 aaKnown RBP17.2■□□□□ 0.34
BRCA2-204ENST00000530893 TRIM25Q14258 630 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms