RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 PCOLCE2Q9UKZ9 415 aa12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 BTBD3Q9Y2F9 522 aa12.69□□□□□ -0.38
CCDC90B-216ENST00000529856 A0A0U1RQS6 177 aa12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 GOLGA8CPA6NN73 597 aa12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 PMPCBO75439 489 aa12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 PCCBP05166 539 aa12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 ZNF30P17039 623 aa12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 TRIM23P36406 574 aa12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 ETV3P41162 512 aa12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 GRK6P43250 576 aa12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 THOP1P52888 689 aa12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 EIF2B5Q13144 721 aaKnown RBP12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 GALNT3Q14435 633 aa12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 GSE1Q14687 1217 aa12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 PCSK7Q16549 785 aa12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 CDKN3Q16667 212 aa12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 ZNF542PQ5EBM4 170 aa12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 SEL1L2Q5TEA6 688 aa12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 LRRC66Q68CR7 880 aa12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 ESRP1Q6NXG1 681 aaKnown RBP12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 PNCKQ6P2M8 343 aa12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 KDELC1Q6UW63 502 aa12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 Q6ZVL8 140 aa12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 KDELC2Q7Z4H8 507 aa12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 PARGQ86W56 976 aa12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 SLC13A5Q86YT5 568 aaPredicted RBP12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 RAVER1Q8IY67 606 aaKnown RBP12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 NUS1Q96E22 293 aa12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 DTD2Q96FN9 168 aa12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 FERMT1Q9BQL6 677 aa12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 TLR10Q9BXR5 811 aa12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 CARD9Q9H257 536 aa12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 UBP1Q9NZI7 540 aa12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 DNPEPQ9ULA0 475 aa12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 R3HDM2Q9Y2K5 976 aaKnown RBP12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 TDRD6O60522 2096 aaKnown RBP12.68□□□□□ -0.38
CCDC90B-216ENST00000529856 LOC285095A0A1B0GVY8 99 aa12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 KCNN4O15554 427 aa12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 ZNF189O75820 626 aaPredicted RBP12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 PIAS2O75928 621 aa12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 CLDN7O95471 211 aa12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 NDST3O95803 873 aa12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 EPOP01588 193 aa12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 CSF2P04141 144 aa12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 HOXC4P09017 264 aaPredicted RBP12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 C1SP09871 688 aa12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 DGKAP23743 735 aa12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 STC1P52823 247 aa12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 WNT3AP56704 352 aa12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 TRIP6Q15654 476 aaKnown RBP12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 INAVAQ3KP66 663 aa12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 ANKRD20A2Q5SQ80 823 aa12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 N4BP2L1Q5TBK1 243 aaPredicted RBP12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 ANKRD20A1Q5TYW2 823 aa12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 ANKRD20A3Q5VUR7 823 aa12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 MACC1Q6ZN28 852 aa12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 RFLNAQ6ZTI6 216 aa12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 GLRX5Q86SX6 157 aa12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 REXO1L1PQ8IX06 675 aa12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 PELI3Q8N2H9 469 aa12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 SLC25A45Q8N413 288 aa12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 SLC35B2Q8TB61 432 aa12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 BAHD1Q8TBE0 780 aaPredicted RBP12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 OXNAD1Q96HP4 312 aaPredicted RBP12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 CDC6Q99741 560 aa12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 CAAP1Q9H8G2 361 aa12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 MAGEE1Q9HCI5 957 aa12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 DNAJC28Q9NX36 388 aa12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 RSPH14Q9UHP6 348 aa12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 KLF15Q9UIH9 416 aa12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 OR1A2Q9Y585 309 aa12.67□□□□□ -0.38
CCDC90B-216ENST00000529856 C1orf232A0A0U1RR37 186 aa12.66□□□□□ -0.38
CCDC90B-216ENST00000529856 SPAARA0A1B0GVQ0 90 aa12.66□□□□□ -0.38
CCDC90B-216ENST00000529856 C5orf60A6NFR6 353 aa12.66□□□□□ -0.38
CCDC90B-216ENST00000529856 K7ESM1 405 aa12.66□□□□□ -0.38
CCDC90B-216ENST00000529856 ZSCAN12O43309 604 aa12.66□□□□□ -0.38
CCDC90B-216ENST00000529856 SDC3O75056 442 aa12.66□□□□□ -0.38
CCDC90B-216ENST00000529856 STK10O94804 968 aaKnown RBP12.66□□□□□ -0.38
CCDC90B-216ENST00000529856 NME1P15531 152 aaKnown RBP12.66□□□□□ -0.38
CCDC90B-216ENST00000529856 HTR1BP28222 390 aa12.66□□□□□ -0.38
CCDC90B-216ENST00000529856 TEAD1P28347 426 aa12.66□□□□□ -0.38
CCDC90B-216ENST00000529856 HNRNPKP61978 463 aaKnown RBP eCLIP12.66□□□□□ -0.38
CCDC90B-216ENST00000529856 DPTQ07507 201 aa12.66□□□□□ -0.38
CCDC90B-216ENST00000529856 MPP3Q13368 585 aa12.66□□□□□ -0.38
CCDC90B-216ENST00000529856 NFATC4Q14934 902 aa12.66□□□□□ -0.38
CCDC90B-216ENST00000529856 ITPRIPL1Q6GPH6 555 aa12.66□□□□□ -0.38
CCDC90B-216ENST00000529856 CCDC70Q6NSX1 233 aa12.66□□□□□ -0.38
CCDC90B-216ENST00000529856 NLRP8Q86W28 1048 aa12.66□□□□□ -0.38
CCDC90B-216ENST00000529856 NRSN1Q8IZ57 195 aa12.66□□□□□ -0.38
CCDC90B-216ENST00000529856 FUBP1Q96AE4 644 aaKnown RBP12.66□□□□□ -0.38
CCDC90B-216ENST00000529856 MRGPRX2Q96LB1 330 aa12.66□□□□□ -0.38
CCDC90B-216ENST00000529856 FRMD8P1Q9BZ68 369 aaPredicted RBP12.66□□□□□ -0.38
CCDC90B-216ENST00000529856 ABCG8Q9H221 673 aa12.66□□□□□ -0.38
CCDC90B-216ENST00000529856 GBA3Q9H227 469 aa12.66□□□□□ -0.38
CCDC90B-216ENST00000529856 UCKL1Q9NWZ5 548 aa12.66□□□□□ -0.38
CCDC90B-216ENST00000529856 PNMA8BQ9ULN7 279 aaPredicted RBP12.66□□□□□ -0.38
CCDC90B-216ENST00000529856 CACNA1AO00555 2505 aa12.66□□□□□ -0.38
CCDC90B-216ENST00000529856 ARID1BQ8NFD5 2236 aaPredicted RBP12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 MED19A0JLT2 244 aaPredicted RBP12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 F5H423 210 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms