RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 PDFQ9HBH1 243 aa10.59□□□□□ -0.71
CPSF1-203ENST00000527916 UBA2Q9UBT2 640 aaPredicted RBP10.59□□□□□ -0.71
CPSF1-203ENST00000527916 APPL1Q9UKG1 709 aa10.59□□□□□ -0.71
CPSF1-203ENST00000527916 ANKRD36A6QL64 1941 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 CELSR2Q9HCU4 2923 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 ARHGAP42A6NI28 874 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 AGRPO00253 132 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 CAPN5O15484 640 aaPredicted RBP10.58□□□□□ -0.72
CPSF1-203ENST00000527916 PRPSAP2O60256 369 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 PRAMEF11O60813 436 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 LRCH4O75427 683 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 RASGRP1O95267 797 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 SERPING1P05155 500 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 UGT2B4P06133 528 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 SKILP12757 684 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 PNLIPP16233 465 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 GLB1P16278 677 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 ERCC2P18074 760 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 MIPP30301 263 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 IGFALSP35858 605 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 ETV5P41161 510 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 CSNK1DP48730 415 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 PEX5P50542 639 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 PAPOLAP51003 745 aaKnown RBP10.58□□□□□ -0.72
CPSF1-203ENST00000527916 ZBED6P86452 979 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 NSUN2Q08J23 767 aaKnown RBP eCLIP10.58□□□□□ -0.72
CPSF1-203ENST00000527916 ARHGEF7Q14155 803 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 PIGHQ14442 188 aaPredicted RBP10.58□□□□□ -0.72
CPSF1-203ENST00000527916 RFTN1Q14699 578 aaPredicted RBP10.58□□□□□ -0.72
CPSF1-203ENST00000527916 CA9Q16790 459 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 BOLA3Q53S33 107 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 ATXN7L2Q5T6C5 722 aaPredicted RBP10.58□□□□□ -0.72
CPSF1-203ENST00000527916 HGSNATQ68CP4 663 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 LEKR1Q6ZMV7 388 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 RFX8Q6ZV50 586 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 LUZP1Q86V48 1076 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 LZTR1Q8N653 840 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 ATL2Q8NHH9 583 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 JPH3Q8WXH2 748 aaPredicted RBP10.58□□□□□ -0.72
CPSF1-203ENST00000527916 ZNF653Q96CK0 615 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 ZNF641Q96N77 438 aaPredicted RBP10.58□□□□□ -0.72
CPSF1-203ENST00000527916 TUBGCP5Q96RT8 1024 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 PEBP4Q96S96 227 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 SLC39A8Q9C0K1 460 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 ZNF71Q9NQZ8 489 aaPredicted RBP10.58□□□□□ -0.72
CPSF1-203ENST00000527916 KCNK4Q9NYG8 393 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 LHX3Q9UBR4 397 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 PLEKHB1Q9UF11 243 aaPredicted RBP10.58□□□□□ -0.72
CPSF1-203ENST00000527916 PCSK1NQ9UHG2 260 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 PNMA8BQ9ULN7 279 aaPredicted RBP10.58□□□□□ -0.72
CPSF1-203ENST00000527916 CAPN11Q9UMQ6 739 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 PLAAQ9Y263 795 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 RNF215Q9Y6U7 377 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 SDK2Q58EX2 2172 aa10.58□□□□□ -0.72
CPSF1-203ENST00000527916 TSPAN11A1L157 253 aa10.57□□□□□ -0.72
CPSF1-203ENST00000527916 ZNF891A8MT65 544 aaPredicted RBP10.57□□□□□ -0.72
CPSF1-203ENST00000527916 GOLGA6L19H0YKK7 550 aa10.57□□□□□ -0.72
CPSF1-203ENST00000527916 J3KR12 359 aa10.57□□□□□ -0.72
CPSF1-203ENST00000527916 ZW10O43264 779 aa10.57□□□□□ -0.72
CPSF1-203ENST00000527916 DAPK3O43293 454 aa10.57□□□□□ -0.72
CPSF1-203ENST00000527916 ATMINO43313 823 aaPredicted RBP10.57□□□□□ -0.72
CPSF1-203ENST00000527916 TM7SF2O76062 418 aa10.57□□□□□ -0.72
CPSF1-203ENST00000527916 CELA2BP08218 269 aaPredicted RBP10.57□□□□□ -0.72
CPSF1-203ENST00000527916 TIMP2P16035 220 aa10.57□□□□□ -0.72
CPSF1-203ENST00000527916 ELP6Q0PNE2 266 aa10.57□□□□□ -0.72
CPSF1-203ENST00000527916 AGERQ15109 404 aa10.57□□□□□ -0.72
CPSF1-203ENST00000527916 DPYSL2Q16555 572 aa10.57□□□□□ -0.72
CPSF1-203ENST00000527916 MAP9Q49MG5 647 aa10.57□□□□□ -0.72
CPSF1-203ENST00000527916 TMEM52BQ4KMG9 183 aa10.57□□□□□ -0.72
CPSF1-203ENST00000527916 TMCO4Q5TGY1 634 aa10.57□□□□□ -0.72
CPSF1-203ENST00000527916 RD3Q7Z3Z2 195 aa10.57□□□□□ -0.72
CPSF1-203ENST00000527916 SPRED1Q7Z699 444 aa10.57□□□□□ -0.72
CPSF1-203ENST00000527916 PIM3Q86V86 326 aa10.57□□□□□ -0.72
CPSF1-203ENST00000527916 ARHGAP12Q8IWW6 846 aa10.57□□□□□ -0.72
CPSF1-203ENST00000527916 NIPA2Q8N8Q9 360 aa10.57□□□□□ -0.72
CPSF1-203ENST00000527916 CCDC112Q8NEF3 446 aa10.57□□□□□ -0.72
CPSF1-203ENST00000527916 NKD1Q969G9 470 aa10.57□□□□□ -0.72
CPSF1-203ENST00000527916 KCTD15Q96SI1 283 aaPredicted RBP10.57□□□□□ -0.72
CPSF1-203ENST00000527916 TRIM7Q9C029 511 aa10.57□□□□□ -0.72
CPSF1-203ENST00000527916 CDH19Q9H159 772 aa10.57□□□□□ -0.72
CPSF1-203ENST00000527916 SUV39H2Q9H5I1 410 aa10.57□□□□□ -0.72
CPSF1-203ENST00000527916 GPATCH2LQ9NWQ4 482 aa10.57□□□□□ -0.72
CPSF1-203ENST00000527916 CWC15Q9P013 229 aaKnown RBP10.57□□□□□ -0.72
CPSF1-203ENST00000527916 CFAP69A5D8W1 941 aa10.56□□□□□ -0.72
CPSF1-203ENST00000527916 HGSO14964 777 aaPredicted RBP10.56□□□□□ -0.72
CPSF1-203ENST00000527916 PALMO75781 387 aa10.56□□□□□ -0.72
CPSF1-203ENST00000527916 LIFP15018 202 aa10.56□□□□□ -0.72
CPSF1-203ENST00000527916 IL10RBQ08334 325 aa10.56□□□□□ -0.72
CPSF1-203ENST00000527916 DPYSQ14117 519 aa10.56□□□□□ -0.72
CPSF1-203ENST00000527916 TCEA2Q15560 299 aa10.56□□□□□ -0.72
CPSF1-203ENST00000527916 UGP2Q16851 508 aa10.56□□□□□ -0.72
CPSF1-203ENST00000527916 ALG11Q2TAA5 492 aa10.56□□□□□ -0.72
CPSF1-203ENST00000527916 TDRD12Q587J7 1177 aaKnown RBP10.56□□□□□ -0.72
CPSF1-203ENST00000527916 CERCAMQ5T4B2 595 aa10.56□□□□□ -0.72
CPSF1-203ENST00000527916 BRAT1Q6PJG6 821 aa10.56□□□□□ -0.72
CPSF1-203ENST00000527916 SLITRK4Q8IW52 837 aa10.56□□□□□ -0.72
CPSF1-203ENST00000527916 GPR156Q8NFN8 814 aa10.56□□□□□ -0.72
CPSF1-203ENST00000527916 CXorf40AQ8TE69 158 aa10.56□□□□□ -0.72
CPSF1-203ENST00000527916 TSACCQ96A04 125 aaPredicted RBP10.56□□□□□ -0.72
CPSF1-203ENST00000527916 MIB2Q96AX9 1013 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms