RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 CUZD1Q86UP6 607 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 FTHL17Q9BXU8 183 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 ELOVL4Q9GZR5 314 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 PTPRHQ9HD43 1115 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 THG1LQ9NWX6 298 aaKnown RBP12.51□□□□□ -0.41
TSKU-203ENST00000527881 GMIPQ9P107 970 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 SLCO3A1Q9UIG8 710 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 CENPXA8MT69 81 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 HOXC11O43248 304 aaPredicted RBP12.51□□□□□ -0.41
TSKU-203ENST00000527881 PARNO95453 639 aaKnown RBP12.51□□□□□ -0.41
TSKU-203ENST00000527881 C7P10643 843 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 AGXTP21549 392 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 GPD2P43304 727 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 GNG2P59768 71 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 HABP4Q5JVS0 413 aaKnown RBP12.51□□□□□ -0.41
TSKU-203ENST00000527881 CATSPEREQ5SY80 951 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 ZCCHC8Q6NZY4 707 aaKnown RBP12.51□□□□□ -0.41
TSKU-203ENST00000527881 SLC16A12Q6ZSM3 486 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 TBCBQ99426 244 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 TMEM246Q9BRR3 403 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 SLC38A10Q9HBR0 1119 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 C8orf4Q9NR00 106 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 ZNF99A8MXY4 864 aaPredicted RBP12.51□□□□□ -0.41
TSKU-203ENST00000527881 MFSD11O43934 449 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 NOBOXO60393 691 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 ASNSP08243 561 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 AXLP30530 894 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 ATICP31939 592 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 PPP1R8Q12972 351 aaKnown RBP12.51□□□□□ -0.41
TSKU-203ENST00000527881 RBM48Q5RL73 367 aaKnown RBP12.51□□□□□ -0.41
TSKU-203ENST00000527881 TRAPPC3LQ5T215 181 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 TFAP2DQ7Z6R9 452 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 P2RY8Q86VZ1 359 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 FAM131BQ86XD5 332 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 PELI3Q8N2H9 469 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 MFSD4AQ8N468 514 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 ROPN1LQ96C74 230 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 EMILIN2Q9BXX0 1053 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 B3GNT5Q9BYG0 378 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 RHOBTB2Q9BYZ6 727 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 TSPAN16Q9UKR8 245 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 TMX2Q9Y320 296 aa12.51□□□□□ -0.41
TSKU-203ENST00000527881 SLC22A1O15245 554 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 SBK3P0C264 359 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 KCNA2P16389 499 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 IL12AP29459 219 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 ARSFP54793 590 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 ADARB1P78563 741 aaKnown RBP12.5□□□□□ -0.41
TSKU-203ENST00000527881 HIST2H2ACQ16777 129 aaPredicted RBP12.5□□□□□ -0.41
TSKU-203ENST00000527881 CEP78Q5JTW2 689 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 SIGIRRQ6IA17 410 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 PRMT9Q6P2P2 845 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 ELMOD2Q8IZ81 293 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 ZNF567Q8N184 647 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 OR6Q1Q8NGQ2 317 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 ZNF560Q96MR9 790 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 HOPXQ9BPY8 73 aaPredicted RBP12.5□□□□□ -0.41
TSKU-203ENST00000527881 TOR3AQ9H497 397 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 ALG2Q9H553 416 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 CCNL1Q9UK58 526 aaPredicted RBP12.5□□□□□ -0.41
TSKU-203ENST00000527881 EDN1P05305 212 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 SLC35E2BP0CK96 405 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 MYCLP1P12525 358 aaPredicted RBP12.5□□□□□ -0.41
TSKU-203ENST00000527881 PRKCAP17252 672 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 BDNFP23560 247 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 MAGEA12P43365 314 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 PPP5CP53041 499 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 IL5RAQ01344 420 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 C6orf141Q5SZD1 244 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 FKBP9P1Q75LS8 142 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 SPATC1Q76KD6 591 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 AMIGO3Q86WK7 504 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 ZDHHC13Q8IUH4 622 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 C12orf29Q8N999 325 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 OR13J1Q8NGT2 312 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 ZHX1-C8orf76Q96EF9 292 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 OR2B2Q9GZK3 357 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 PRDM12Q9H4Q4 367 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 SMURF2Q9HAU4 748 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 CMTM6Q9NX76 183 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 PCDHGA8Q9Y5G5 932 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 H0YAE9 185 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 AGRPO00253 132 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 TEX28O15482 410 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 XPNPEP2O43895 674 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 ITGB3P05106 788 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 ICAM1P05362 532 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 CCDC159P0C7I6 412 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 GSK3BP49841 420 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 BCAT1P54687 386 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 LIPEQ05469 1076 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 GOLGA7BQ2TAP0 167 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 ADPRMQ3LIE5 342 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 TTC23Q5W5X9 447 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 GADL1Q6ZQY3 521 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 C7orf31Q8N865 590 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 SLC22A17Q8WUG5 538 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 BHMTQ93088 406 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 ZDHHC15Q96MV8 337 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 YME1L1Q96TA2 773 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms