RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 ISCUQ9H1K1 167 aa22.41■■□□□ 1.18
TRAPPC4-208ENST00000527680 CARS2Q9HA77 564 aaKnown RBP22.41■■□□□ 1.18
TRAPPC4-208ENST00000527680 NOD2Q9HC29 1040 aa22.41■■□□□ 1.18
TRAPPC4-208ENST00000527680 PHPT1Q9NRX4 125 aaPredicted RBP22.41■■□□□ 1.18
TRAPPC4-208ENST00000527680 ETNK2Q9NVF9 386 aa22.41■■□□□ 1.18
TRAPPC4-208ENST00000527680 KCTD5Q9NXV2 234 aa22.41■■□□□ 1.18
TRAPPC4-208ENST00000527680 PISDQ9UG56 409 aa22.41■■□□□ 1.18
TRAPPC4-208ENST00000527680 APPL1Q9UKG1 709 aa22.41■■□□□ 1.18
TRAPPC4-208ENST00000527680 PHTF1Q9UMS5 762 aa22.41■■□□□ 1.18
TRAPPC4-208ENST00000527680 RNF215Q9Y6U7 377 aa22.41■■□□□ 1.18
TRAPPC4-208ENST00000527680 GCN1Q92616 2671 aaKnown RBP22.4■■□□□ 1.18
TRAPPC4-208ENST00000527680 PRSS38A1L453 326 aa22.4■■□□□ 1.18
TRAPPC4-208ENST00000527680 K7ENP7 123 aa22.4■■□□□ 1.18
TRAPPC4-208ENST00000527680 NOBOXO60393 691 aa22.4■■□□□ 1.18
TRAPPC4-208ENST00000527680 SOCS5O75159 536 aa22.4■■□□□ 1.18
TRAPPC4-208ENST00000527680 ZIC2O95409 532 aaPredicted RBP22.4■■□□□ 1.18
TRAPPC4-208ENST00000527680 GM2AP17900 193 aa22.4■■□□□ 1.18
TRAPPC4-208ENST00000527680 VIPR1P32241 457 aa22.4■■□□□ 1.18
TRAPPC4-208ENST00000527680 SSR1P43307 286 aaKnown RBP22.4■■□□□ 1.18
TRAPPC4-208ENST00000527680 MAXP61244 160 aa22.4■■□□□ 1.18
TRAPPC4-208ENST00000527680 CLN3Q13286 438 aa22.4■■□□□ 1.18
TRAPPC4-208ENST00000527680 BIRC2Q13490 618 aa22.4■■□□□ 1.18
TRAPPC4-208ENST00000527680 PIGHQ14442 188 aaPredicted RBP22.4■■□□□ 1.18
TRAPPC4-208ENST00000527680 CERCAMQ5T4B2 595 aa22.4■■□□□ 1.18
TRAPPC4-208ENST00000527680 MARC1Q5VT66 337 aa22.4■■□□□ 1.18
TRAPPC4-208ENST00000527680 SPECC1LQ69YQ0 1117 aa22.4■■□□□ 1.18
TRAPPC4-208ENST00000527680 INO80CQ6PI98 192 aaPredicted RBP22.4■■□□□ 1.18
TRAPPC4-208ENST00000527680 SFTPA2Q8IWL1 248 aa22.4■■□□□ 1.18
TRAPPC4-208ENST00000527680 PELI3Q8N2H9 469 aa22.4■■□□□ 1.18
TRAPPC4-208ENST00000527680 ATPAF2Q8N5M1 289 aa22.4■■□□□ 1.18
TRAPPC4-208ENST00000527680 KIAA1524Q8TCG1 905 aa22.4■■□□□ 1.18
TRAPPC4-208ENST00000527680 CCNL2Q96S94 520 aaPredicted RBP22.4■■□□□ 1.18
TRAPPC4-208ENST00000527680 ARHGEF17Q96PE2 2063 aaPredicted RBP22.4■■□□□ 1.18
TRAPPC4-208ENST00000527680 A0A1B0GTH6 734 aa22.39■■□□□ 1.17
TRAPPC4-208ENST00000527680 HTRA2O43464 458 aaPredicted RBP22.39■■□□□ 1.17
TRAPPC4-208ENST00000527680 MAFKO60675 156 aa22.39■■□□□ 1.17
TRAPPC4-208ENST00000527680 RARAP10276 462 aa22.39■■□□□ 1.17
TRAPPC4-208ENST00000527680 MYCLP1P12525 358 aaPredicted RBP22.39■■□□□ 1.17
TRAPPC4-208ENST00000527680 TCF4P15884 667 aa22.39■■□□□ 1.17
TRAPPC4-208ENST00000527680 PNLIPP16233 465 aa22.39■■□□□ 1.17
TRAPPC4-208ENST00000527680 CCKBRP32239 447 aa22.39■■□□□ 1.17
TRAPPC4-208ENST00000527680 ITKQ08881 620 aa22.39■■□□□ 1.17
TRAPPC4-208ENST00000527680 LY6DQ14210 128 aa22.39■■□□□ 1.17
TRAPPC4-208ENST00000527680 CNGA3Q16281 694 aa22.39■■□□□ 1.17
TRAPPC4-208ENST00000527680 KIAA1614Q5VZ46 1190 aa22.39■■□□□ 1.17
TRAPPC4-208ENST00000527680 HEATR4Q86WZ0 1026 aa22.39■■□□□ 1.17
TRAPPC4-208ENST00000527680 PGBD5Q8N414 524 aa22.39■■□□□ 1.17
TRAPPC4-208ENST00000527680 CSPG4P5Q96PW8 444 aa22.39■■□□□ 1.17
TRAPPC4-208ENST00000527680 SSUH2Q9Y2M2 353 aa22.39■■□□□ 1.17
TRAPPC4-208ENST00000527680 LOXL2Q9Y4K0 774 aa22.39■■□□□ 1.17
TRAPPC4-208ENST00000527680 PCDHGA7Q9Y5G6 932 aa22.39■■□□□ 1.17
TRAPPC4-208ENST00000527680 HEXIM1O94992 359 aaKnown RBP22.38■■□□□ 1.17
TRAPPC4-208ENST00000527680 SERPINB6P35237 376 aa22.38■■□□□ 1.17
TRAPPC4-208ENST00000527680 ETV3P41162 512 aa22.38■■□□□ 1.17
TRAPPC4-208ENST00000527680 MMP13P45452 471 aa22.38■■□□□ 1.17
TRAPPC4-208ENST00000527680 ILF3Q12906 894 aaKnown RBP eCLIP22.38■■□□□ 1.17
TRAPPC4-208ENST00000527680 HLTFQ14527 1009 aaKnown RBP eCLIP22.38■■□□□ 1.17
TRAPPC4-208ENST00000527680 KRT81Q14533 505 aa22.38■■□□□ 1.17
TRAPPC4-208ENST00000527680 NR1I3Q14994 352 aa22.38■■□□□ 1.17
TRAPPC4-208ENST00000527680 NFKBIBQ15653 356 aa22.38■■□□□ 1.17
TRAPPC4-208ENST00000527680 PHF19Q5T6S3 580 aa22.38■■□□□ 1.17
TRAPPC4-208ENST00000527680 CAVIN1Q6NZI2 390 aaKnown RBP22.38■■□□□ 1.17
TRAPPC4-208ENST00000527680 HSD11B1LQ7Z5J1 315 aa22.38■■□□□ 1.17
TRAPPC4-208ENST00000527680 SPRED1Q7Z699 444 aa22.38■■□□□ 1.17
TRAPPC4-208ENST00000527680 NDUFAF2Q8N183 169 aa22.38■■□□□ 1.17
TRAPPC4-208ENST00000527680 SNRNP27Q8WVK2 155 aaKnown RBP22.38■■□□□ 1.17
TRAPPC4-208ENST00000527680 GSDMCQ9BYG8 508 aa22.38■■□□□ 1.17
TRAPPC4-208ENST00000527680 SPATS2LQ9NUQ6 558 aaKnown RBP22.38■■□□□ 1.17
TRAPPC4-208ENST00000527680 BZW2Q9Y6E2 419 aaKnown RBP22.38■■□□□ 1.17
TRAPPC4-208ENST00000527680 RHPN2P1A8MT19 583 aa22.37■■□□□ 1.17
TRAPPC4-208ENST00000527680 NUDT21O43809 227 aaKnown RBP22.37■■□□□ 1.17
TRAPPC4-208ENST00000527680 PEX11BO96011 259 aa22.37■■□□□ 1.17
TRAPPC4-208ENST00000527680 KRT10P13645 584 aa22.37■■□□□ 1.17
TRAPPC4-208ENST00000527680 CCNB1P14635 433 aa22.37■■□□□ 1.17
TRAPPC4-208ENST00000527680 CR2P20023 1033 aa22.37■■□□□ 1.17
TRAPPC4-208ENST00000527680 ALDH4A1P30038 563 aa22.37■■□□□ 1.17
TRAPPC4-208ENST00000527680 GNPDA1P46926 289 aa22.37■■□□□ 1.17
TRAPPC4-208ENST00000527680 CDH6P55285 790 aa22.37■■□□□ 1.17
TRAPPC4-208ENST00000527680 TRAF2Q12933 501 aa22.37■■□□□ 1.17
TRAPPC4-208ENST00000527680 AMZ1Q400G9 498 aa22.37■■□□□ 1.17
TRAPPC4-208ENST00000527680 ARMC12Q5T9G4 340 aa22.37■■□□□ 1.17
TRAPPC4-208ENST00000527680 TXNRD3NBQ6F5E7 133 aa22.37■■□□□ 1.17
TRAPPC4-208ENST00000527680 RAET1GQ6H3X3 334 aa22.37■■□□□ 1.17
TRAPPC4-208ENST00000527680 Q6ZVL8 140 aa22.37■■□□□ 1.17
TRAPPC4-208ENST00000527680 PIM3Q86V86 326 aa22.37■■□□□ 1.17
TRAPPC4-208ENST00000527680 ZDHHC1Q8WTX9 485 aa22.37■■□□□ 1.17
TRAPPC4-208ENST00000527680 BTBD6Q96KE9 485 aa22.37■■□□□ 1.17
TRAPPC4-208ENST00000527680 CMKLR1Q99788 373 aa22.37■■□□□ 1.17
TRAPPC4-208ENST00000527680 MGME1Q9BQP7 344 aa22.37■■□□□ 1.17
TRAPPC4-208ENST00000527680 TEX101Q9BY14 249 aa22.37■■□□□ 1.17
TRAPPC4-208ENST00000527680 NT5MQ9NPB1 228 aa22.37■■□□□ 1.17
TRAPPC4-208ENST00000527680 IP6K2Q9UHH9 426 aa22.37■■□□□ 1.17
TRAPPC4-208ENST00000527680 ZW10O43264 779 aa22.36■■□□□ 1.17
TRAPPC4-208ENST00000527680 CEACAM5P06731 702 aa22.36■■□□□ 1.17
TRAPPC4-208ENST00000527680 PLA2G2AP14555 144 aa22.36■■□□□ 1.17
TRAPPC4-208ENST00000527680 CTPS1P17812 591 aa22.36■■□□□ 1.17
TRAPPC4-208ENST00000527680 MAPK10P53779 464 aa22.36■■□□□ 1.17
TRAPPC4-208ENST00000527680 MAP9Q49MG5 647 aa22.36■■□□□ 1.17
TRAPPC4-208ENST00000527680 RALGPS1Q5JS13 557 aa22.36■■□□□ 1.17
TRAPPC4-208ENST00000527680 CCDC122Q5T0U0 273 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms