RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 ATP6V1B2P21281 511 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 DNAJB1P25685 340 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 POLD2P49005 469 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 AIF1P55008 147 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 DAOAP59103 153 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 LILRA4P59901 499 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 SEMA3BQ13214 749 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 INPP5AQ14642 412 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 ZBED5Q49AG3 693 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 LHX8Q68G74 356 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 ERMP1Q7Z2K6 904 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 DEFB128Q7Z7B8 93 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 PATL1Q86TB9 770 aaKnown RBP12.53□□□□□ -0.4
CAPN1-208ENST00000527323 IFNEQ86WN2 208 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 BBS5Q8N3I7 341 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 ANKFN1Q8N957 763 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 GIPC3Q8TF64 312 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 GLT1D1Q96MS3 346 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 SMOXQ9NWM0 555 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 MBLAC1A4D2B0 266 aaPredicted RBP12.53□□□□□ -0.4
CAPN1-208ENST00000527323 LTA4HP09960 611 aaKnown RBP12.53□□□□□ -0.4
CAPN1-208ENST00000527323 ATXN8OSP0DMR3 200 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 BMP2P12643 396 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 GATMP50440 423 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 SLC5A3P53794 718 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 RPS6KA2Q15349 733 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 PSMD5Q16401 504 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 RYBPQ8N488 228 aaPredicted RBP12.53□□□□□ -0.4
CAPN1-208ENST00000527323 ATPAF2Q8N5M1 289 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 KCTD13Q8WZ19 329 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 LRCH3Q96II8 777 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 HHIPL1Q96JK4 782 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 RANBP9Q96S59 729 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 CXorf21Q9HAI6 301 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 IGSF5Q9NSI5 407 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 PADI3Q9ULW8 664 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 IPPQ9Y573 584 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 DHRS12A0PJE2 317 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 ATP6V1G1O75348 118 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 RBP1P09455 135 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 HOXD8P13378 290 aaPredicted RBP12.53□□□□□ -0.4
CAPN1-208ENST00000527323 FASP25445 335 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 ARNTP27540 789 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 CHRNA4P43681 627 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 ARCN1P48444 511 aaKnown RBP12.53□□□□□ -0.4
CAPN1-208ENST00000527323 CDH13P55290 713 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 VPS26BQ4G0F5 336 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 ZNF789Q5FWF6 425 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 GPR107Q5VW38 600 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 FAM45BPQ6NSW5 357 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 BNIPLQ7Z465 357 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 RNF180Q86T96 592 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 FAM45AQ8TCE6 357 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 ADI1Q9BV57 179 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 SARDHQ9UL12 918 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 ZNF510Q9Y2H8 683 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 TCAF1Q9Y4C2 921 aa12.53□□□□□ -0.4
CAPN1-208ENST00000527323 PRRC2BQ5JSZ5 2229 aaKnown RBP12.52□□□□□ -0.4
CAPN1-208ENST00000527323 CROCCQ5TZA2 2017 aa12.52□□□□□ -0.4
CAPN1-208ENST00000527323 SMIM35A0A1B0GVV1 85 aa12.52□□□□□ -0.4
CAPN1-208ENST00000527323 SH3PXD2BA1X283 911 aa12.52□□□□□ -0.4
CAPN1-208ENST00000527323 CLOCKO15516 846 aa12.52□□□□□ -0.4
CAPN1-208ENST00000527323 F9P00740 461 aa12.52□□□□□ -0.4
CAPN1-208ENST00000527323 TFPTP0C1Z6 253 aa12.52□□□□□ -0.4
CAPN1-208ENST00000527323 PSMA4P25789 261 aaKnown RBP12.52□□□□□ -0.4
CAPN1-208ENST00000527323 SCAPQ12770 1279 aa12.52□□□□□ -0.4
CAPN1-208ENST00000527323 MERTKQ12866 999 aa12.52□□□□□ -0.4
CAPN1-208ENST00000527323 CAPRIN1Q14444 709 aaKnown RBP12.52□□□□□ -0.4
CAPN1-208ENST00000527323 TECRLQ5HYJ1 363 aa12.52□□□□□ -0.4
CAPN1-208ENST00000527323 ALKAL1Q6UXT8 129 aa12.52□□□□□ -0.4
CAPN1-208ENST00000527323 GPRIN1Q7Z2K8 1008 aa12.52□□□□□ -0.4
CAPN1-208ENST00000527323 TNIP2Q8NFZ5 429 aa12.52□□□□□ -0.4
CAPN1-208ENST00000527323 PLEKHG4BQ96PX9 1271 aa12.52□□□□□ -0.4
CAPN1-208ENST00000527323 UHRF1Q96T88 793 aaPredicted RBP12.52□□□□□ -0.4
CAPN1-208ENST00000527323 TRIM15Q9C019 465 aa12.52□□□□□ -0.4
CAPN1-208ENST00000527323 ALG9Q9H6U8 611 aa12.52□□□□□ -0.4
CAPN1-208ENST00000527323 GLOD4Q9HC38 313 aa12.52□□□□□ -0.4
CAPN1-208ENST00000527323 TTC3P53804 2025 aa12.52□□□□□ -0.41
CAPN1-208ENST00000527323 A0A0J9YYE9 177 aa12.52□□□□□ -0.41
CAPN1-208ENST00000527323 A0A1W2PQ45 241 aaPredicted RBP12.52□□□□□ -0.41
CAPN1-208ENST00000527323 A0A1W2PQY0 241 aa12.52□□□□□ -0.41
CAPN1-208ENST00000527323 M0QZ92 97 aa12.52□□□□□ -0.41
CAPN1-208ENST00000527323 ANGPT2O15123 496 aa12.52□□□□□ -0.41
CAPN1-208ENST00000527323 HOXD10P28358 340 aa12.52□□□□□ -0.41
CAPN1-208ENST00000527323 SCNN1GP51170 649 aa12.52□□□□□ -0.41
CAPN1-208ENST00000527323 GEMP55040 296 aa12.52□□□□□ -0.41
CAPN1-208ENST00000527323 NAA20P61599 178 aa12.52□□□□□ -0.41
CAPN1-208ENST00000527323 GPR180Q86V85 440 aa12.52□□□□□ -0.41
CAPN1-208ENST00000527323 CNTN4Q8IWV2 1026 aa12.52□□□□□ -0.41
CAPN1-208ENST00000527323 SMYD1Q8NB12 490 aa12.52□□□□□ -0.41
CAPN1-208ENST00000527323 C2CD4AQ8NCU7 369 aaPredicted RBP12.52□□□□□ -0.41
CAPN1-208ENST00000527323 OLFM1Q99784 485 aa12.52□□□□□ -0.41
CAPN1-208ENST00000527323 ADAM2Q99965 735 aa12.52□□□□□ -0.41
CAPN1-208ENST00000527323 TBC1D23Q9NUY8 699 aa12.52□□□□□ -0.41
CAPN1-208ENST00000527323 RBM22Q9NW64 420 aaKnown RBP eCLIP12.52□□□□□ -0.41
CAPN1-208ENST00000527323 GIMAP2Q9UG22 337 aa12.52□□□□□ -0.41
CAPN1-208ENST00000527323 MRPS6P82932 125 aaKnown RBP12.51□□□□□ -0.41
CAPN1-208ENST00000527323 PFKPQ01813 784 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 ANKDD1AQ495B1 522 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 KCTD21Q4G0X4 260 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms