RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 USP12O75317 370 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 MTA2O94776 668 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 TNFP01375 233 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 MPOP05164 745 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 HLA-DQB2P05538 268 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 CEACAM5P06731 702 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 KRT7P08729 469 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 CTSEP14091 401 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 CCNCP24863 283 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 EIF2S3P41091 472 aaKnown RBP10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 BLKP51451 505 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 PDX1P52945 283 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 PTSQ03393 145 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 ITKQ08881 620 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 ELOCQ15369 112 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 IFI16Q16666 785 aaKnown RBP10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 ARMC12Q5T9G4 340 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 ALG1LQ6GMV1 187 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 OGFOD3Q6PK18 319 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 LVRNQ6Q4G3 990 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 Q6ZVL8 140 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 PDZD3Q86UT5 571 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 BBS5Q8N3I7 341 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 NSMCE1Q8WV22 266 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 FATE1Q969F0 183 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 NUS1Q96E22 293 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 DTD2Q96FN9 168 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 ATXN7L3BQ96GX2 97 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 CCDC42Q96M95 316 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 DCBLD2Q96PD2 775 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 RNF157Q96PX1 679 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 DEPDC7Q96QD5 511 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 LGMNQ99538 433 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 TEX101Q9BY14 249 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 TMEM168Q9H0V1 697 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 DEF6Q9H4E7 631 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 ZNHIT6Q9NWK9 470 aaKnown RBP10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 DTLQ9NZJ0 730 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 NCKIPSDQ9NZQ3 722 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 GPR34Q9UPC5 381 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 HYOU1Q9Y4L1 999 aa10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 ARHGEF17Q96PE2 2063 aaPredicted RBP10.44□□□□□ -0.74
PRPF40B-204ENST00000527253 ATRXP46100 2492 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 TNFRSF10CO14798 259 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 NOBOXO60393 691 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 SOD1P00441 154 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 MMP2P08253 660 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 CYP2A6P11509 494 aaPredicted RBP10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 CCNB1P14635 433 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 POLD2P49005 469 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 RPIAP49247 311 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 ZBTB17Q13105 803 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 TCEAL1Q15170 157 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 TBC1D25Q3MII6 688 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 SLC9A4Q6AI14 798 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 NPNTQ6UXI9 565 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 B4GALNT4Q76KP1 1039 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 HEATR4Q86WZ0 1026 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 NRROSQ86YC3 692 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 MAP7D3Q8IWC1 876 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 CCDC13Q8IYE1 715 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 CNTD1Q8N815 330 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 ARL10Q8N8L6 244 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 GPR156Q8NFN8 814 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 ATL2Q8NHH9 583 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 TPCN2Q8NHX9 752 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 SNIP1Q8TAD8 396 aaKnown RBP10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 CCDC74AQ96AQ1 378 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 PRR11Q96HE9 360 aaPredicted RBP10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 AGAP2Q99490 1192 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 CCDC3Q9BQI4 270 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 TDRD1Q9BXT4 1180 aaKnown RBP10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 FRMD8Q9BZ67 464 aaPredicted RBP10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 POLR1EQ9GZS1 481 aaKnown RBP10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 ABCG8Q9H221 673 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 WDR26Q9H7D7 661 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 CYP4F12Q9HCS2 524 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 EVA1BQ9NVM1 165 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 CD84Q9UIB8 345 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 DOLKQ9UPQ8 538 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 CHKBQ9Y259 395 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 ENTPD2Q9Y5L3 495 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 ST14Q9Y5Y6 855 aa10.43□□□□□ -0.74
PRPF40B-204ENST00000527253 UNC13CQ8NB66 2214 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 NBEAQ8NFP9 2946 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 A0A0J9YYE9 177 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 A0A1W2PQM1 296 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 PRSS38A1L453 326 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 LRRD1A4D1F6 860 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 AKR1B15C9JRZ8 316 aaPredicted RBP10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 KCNK1O00180 336 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 PSMD11O00231 422 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 NTN3O00634 580 aaPredicted RBP10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 JCHAINP01591 159 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 TRBC1P01850 177 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 MYCLP1P12525 358 aaPredicted RBP10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 ARHGAP25P42331 645 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 LSSP48449 732 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 GABREP78334 506 aa10.42□□□□□ -0.74
PRPF40B-204ENST00000527253 CCL7P80098 99 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms