RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 CHRNA4P43681 627 aa12.94□□□□□ -0.34
SMPD1-202ENST00000526280 TNNT3P45378 269 aaPredicted RBP12.94□□□□□ -0.34
SMPD1-202ENST00000526280 STC1P52823 247 aa12.94□□□□□ -0.34
SMPD1-202ENST00000526280 OVGP1Q12889 678 aa12.94□□□□□ -0.34
SMPD1-202ENST00000526280 LRRC14Q15048 493 aa12.94□□□□□ -0.34
SMPD1-202ENST00000526280 ACOX1Q15067 660 aa12.94□□□□□ -0.34
SMPD1-202ENST00000526280 TEAD4Q15561 434 aa12.94□□□□□ -0.34
SMPD1-202ENST00000526280 WSCD2Q2TBF2 565 aa12.94□□□□□ -0.34
SMPD1-202ENST00000526280 FAXCQ5TGI0 409 aa12.94□□□□□ -0.34
SMPD1-202ENST00000526280 LRRC66Q68CR7 880 aa12.94□□□□□ -0.34
SMPD1-202ENST00000526280 CCDC137Q6PK04 289 aaKnown RBP12.94□□□□□ -0.34
SMPD1-202ENST00000526280 C4orf22Q6V702 233 aa12.94□□□□□ -0.34
SMPD1-202ENST00000526280 GCNT7Q6ZNI0 430 aa12.94□□□□□ -0.34
SMPD1-202ENST00000526280 HSD11B1LQ7Z5J1 315 aa12.94□□□□□ -0.34
SMPD1-202ENST00000526280 TAB3Q8N5C8 712 aaPredicted RBP12.94□□□□□ -0.34
SMPD1-202ENST00000526280 SLC25A41Q8N5S1 370 aa12.94□□□□□ -0.34
SMPD1-202ENST00000526280 TP53I13Q8NBR0 393 aaPredicted RBP12.94□□□□□ -0.34
SMPD1-202ENST00000526280 DENND6BQ8NEG7 585 aa12.94□□□□□ -0.34
SMPD1-202ENST00000526280 BMFQ96LC9 184 aa12.94□□□□□ -0.34
SMPD1-202ENST00000526280 SRPK1Q96SB4 655 aaKnown RBP12.94□□□□□ -0.34
SMPD1-202ENST00000526280 MYOCQ99972 504 aa12.94□□□□□ -0.34
SMPD1-202ENST00000526280 FICDQ9BVA6 458 aa12.94□□□□□ -0.34
SMPD1-202ENST00000526280 NUSAP1Q9BXS6 441 aaKnown RBP12.94□□□□□ -0.34
SMPD1-202ENST00000526280 ETNK1Q9HBU6 452 aa12.94□□□□□ -0.34
SMPD1-202ENST00000526280 MBNL1Q9NR56 388 aaKnown RBP12.94□□□□□ -0.34
SMPD1-202ENST00000526280 GOLGA6AQ9NYA3 693 aa12.94□□□□□ -0.34
SMPD1-202ENST00000526280 C1orf232A0A0U1RR37 186 aa12.93□□□□□ -0.34
SMPD1-202ENST00000526280 A0A1B0GVT2 93 aa12.93□□□□□ -0.34
SMPD1-202ENST00000526280 LNP1A1A4G5 178 aa12.93□□□□□ -0.34
SMPD1-202ENST00000526280 POM121BA6NF01 834 aa12.93□□□□□ -0.34
SMPD1-202ENST00000526280 H0Y8X5 98 aa12.93□□□□□ -0.34
SMPD1-202ENST00000526280 PDE2AO00408 941 aaPredicted RBP12.93□□□□□ -0.34
SMPD1-202ENST00000526280 FPGTO14772 594 aa12.93□□□□□ -0.34
SMPD1-202ENST00000526280 CTIFO43310 598 aaKnown RBP12.93□□□□□ -0.34
SMPD1-202ENST00000526280 CLDN7O95471 211 aa12.93□□□□□ -0.34
SMPD1-202ENST00000526280 AP2A1O95782 977 aa12.93□□□□□ -0.34
SMPD1-202ENST00000526280 FGF1P05230 155 aa12.93□□□□□ -0.34
SMPD1-202ENST00000526280 PIRTP0C851 137 aa12.93□□□□□ -0.34
SMPD1-202ENST00000526280 PAFAH1B1P43034 410 aa12.93□□□□□ -0.34
SMPD1-202ENST00000526280 FNTAP49354 379 aa12.93□□□□□ -0.34
SMPD1-202ENST00000526280 CLDN2P57739 230 aa12.93□□□□□ -0.34
SMPD1-202ENST00000526280 BNC1Q01954 994 aa12.93□□□□□ -0.34
SMPD1-202ENST00000526280 OLIG2Q13516 323 aa12.93□□□□□ -0.34
SMPD1-202ENST00000526280 DENND2CQ68D51 928 aa12.93□□□□□ -0.34
SMPD1-202ENST00000526280 DENND5AQ6IQ26 1287 aa12.93□□□□□ -0.34
SMPD1-202ENST00000526280 LAYNQ6UX15 382 aa12.93□□□□□ -0.34
SMPD1-202ENST00000526280 PRR23CQ6ZRP0 262 aa12.93□□□□□ -0.34
SMPD1-202ENST00000526280 Q6ZVL8 140 aa12.93□□□□□ -0.34
SMPD1-202ENST00000526280 TECPR1Q7Z6L1 1165 aa12.93□□□□□ -0.34
SMPD1-202ENST00000526280 ABI3BPQ7Z7G0 1075 aa12.93□□□□□ -0.34
SMPD1-202ENST00000526280 RAVER1Q8IY67 606 aaKnown RBP12.93□□□□□ -0.34
SMPD1-202ENST00000526280 PDCD7Q8N8D1 485 aaKnown RBP12.93□□□□□ -0.34
SMPD1-202ENST00000526280 FAM174AQ8TBP5 190 aa12.93□□□□□ -0.34
SMPD1-202ENST00000526280 SKA1Q96BD8 255 aa12.93□□□□□ -0.34
SMPD1-202ENST00000526280 EID2BQ96D98 161 aa12.93□□□□□ -0.34
SMPD1-202ENST00000526280 TBL1YQ9BQ87 522 aa12.93□□□□□ -0.34
SMPD1-202ENST00000526280 LRRC40Q9H9A6 602 aa12.93□□□□□ -0.34
SMPD1-202ENST00000526280 ZFYVE1Q9HBF4 777 aa12.93□□□□□ -0.34
SMPD1-202ENST00000526280 ARNT2Q9HBZ2 717 aa12.93□□□□□ -0.34
SMPD1-202ENST00000526280 FSCN3Q9NQT6 498 aa12.93□□□□□ -0.34
SMPD1-202ENST00000526280 KCTD5Q9NXV2 234 aa12.93□□□□□ -0.34
SMPD1-202ENST00000526280 FEZ2Q9UHY8 353 aaPredicted RBP12.93□□□□□ -0.34
SMPD1-202ENST00000526280 SPO11Q9Y5K1 396 aa12.93□□□□□ -0.34
SMPD1-202ENST00000526280 GOLGA8CPA6NN73 597 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 ERI2A8K979 691 aaKnown RBP12.92□□□□□ -0.34
SMPD1-202ENST00000526280 TLR4O00206 839 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 ARHGAP33O14559 1287 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 USP12O75317 370 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 SYPP08247 313 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 C1SP09871 688 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 ENGP17813 658 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 IGFALSP35858 605 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 ETV3P41162 512 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 C21orf59P57076 290 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 GRIK2Q13002 908 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 SEMA5AQ13591 1074 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 SPARCL1Q14515 664 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 IRF4Q15306 451 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 KIF19Q2TAC6 998 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 KYAT3Q6YP21 454 aaKnown RBP12.92□□□□□ -0.34
SMPD1-202ENST00000526280 Q6ZSR6 202 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 RFLNAQ6ZTI6 216 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 LYSMD3Q7Z3D4 306 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 TMC3Q7Z5M5 1100 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 CCHCR1Q8TD31 782 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 GRK7Q8WTQ7 553 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 LRRC45Q96CN5 670 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 NUS1Q96E22 293 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 DTD2Q96FN9 168 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 KLHDC7BQ96G42 594 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 APOL2Q9BQE5 337 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 ZDHHC5Q9C0B5 715 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 TRABDQ9H4I3 376 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 RAB6BQ9NRW1 208 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 SHOC2Q9UQ13 582 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 ANKRD6Q9Y2G4 727 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 NEU2Q9Y3R4 380 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 ZNF711Q9Y462 761 aa12.92□□□□□ -0.34
SMPD1-202ENST00000526280 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.92□□□□□ -0.34
SMPD1-202ENST00000526280 PCDH15Q96QU1 1955 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms