RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 BYSLQ13895 437 aaKnown RBP3.27□□□□□ -1.89
CSDE1-209ENST00000525132 CCNG2Q16589 344 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 PABPC1LQ4VXU2 614 aaKnown RBP3.27□□□□□ -1.89
CSDE1-209ENST00000525132 RABL3Q5HYI8 236 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 C1QTNF12Q5T7M4 302 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 AFMIDQ63HM1 303 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 DSTYKQ6XUX3 929 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 UNC13DQ70J99 1090 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 GALNT5Q7Z7M9 940 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 SGMS1Q86VZ5 419 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 CPOQ8IVL8 374 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 CCDC117Q8IWD4 279 aaPredicted RBP3.27□□□□□ -1.89
CSDE1-209ENST00000525132 LRRC43Q8N309 656 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 SDR16C5Q8N3Y7 309 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 AMER2Q8N7J2 671 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.27□□□□□ -1.893e-12■□□□□ 9.4
CSDE1-209ENST00000525132 CCDC150Q8NCX0 1101 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 FAM71BQ8TC56 605 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 STT3BQ8TCJ2 826 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 OTUD7AQ8TE49 926 aaPredicted RBP3.27□□□□□ -1.89
CSDE1-209ENST00000525132 DEPDC1BQ8WUY9 529 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 UCMAQ8WVF2 138 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 KBTBD7Q8WVZ9 684 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 APOBEC4Q8WW27 367 aaKnown RBP3.27□□□□□ -1.89
CSDE1-209ENST00000525132 HTRA1Q92743 480 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 RILPL2Q969X0 211 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 RRP36Q96EU6 259 aaKnown RBP3.27□□□□□ -1.89
CSDE1-209ENST00000525132 CYFIP2Q96F07 1278 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 LRRC46Q96FV0 321 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 ATXN7L3BQ96GX2 97 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 ZNF419Q96HQ0 510 aaPredicted RBP3.27□□□□□ -1.89
CSDE1-209ENST00000525132 NUDT16L1Q9BRJ7 211 aaKnown RBP3.27□□□□□ -1.89
CSDE1-209ENST00000525132 SDF4Q9BRK5 362 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 NDC1Q9BTX1 674 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 TRIM54Q9BYV2 358 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 TMEM117Q9H0C3 514 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 MRPL46Q9H2W6 279 aaKnown RBP3.27□□□□□ -1.89
CSDE1-209ENST00000525132 RNPEPQ9H4A4 650 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 PRKRIP1Q9H875 184 aaPredicted RBP3.27□□□□□ -1.89
CSDE1-209ENST00000525132 SMYD2Q9NRG4 433 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 ANKEF1Q9NU02 776 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 NKIRAS2Q9NYR9 191 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 SEPT10Q9P0V9 454 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 AJAP1Q9UKB5 411 aaPredicted RBP3.27□□□□□ -1.89
CSDE1-209ENST00000525132 PADI3Q9ULW8 664 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 OSGIN2Q9Y236 505 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 A0A087X0M5 115 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 A0A0B4J269 797 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 A0A1B0GX30 115 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 A0A1W2PPH5 198 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 CCDC78A2IDD5 438 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 HEPACAM2A8MVW5 462 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 GOLGA6L6A8MZA4 724 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 CHADO15335 359 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 MFAP3LO75121 409 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 ZBED4O75132 1171 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 CNTN5O94779 1100 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 AHSGP02765 367 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 RBMY1CP0DJD4 496 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 CKMT2P17540 419 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 KRT4P19013 534 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 GCSHP23434 173 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 U2AF2P26368 475 aaKnown RBP eCLIP3.26□□□□□ -1.893e-6■■■■■ 27
CSDE1-209ENST00000525132 APOBEC3AP31941 199 aaPredicted RBP3.26□□□□□ -1.89
CSDE1-209ENST00000525132 ADD2P35612 726 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 RABIFP47224 123 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 KCNJ5P48544 419 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 CSNK1EP49674 416 aaKnown RBP3.26□□□□□ -1.89
CSDE1-209ENST00000525132 CCT8P50990 548 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 NAP1L1P55209 391 aaKnown RBP3.26□□□□□ -1.89
CSDE1-209ENST00000525132 SOX8P57073 446 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 CLRN1P58418 232 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 HHEXQ03014 270 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 SLC13A2Q13183 592 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 LAMB3Q13751 1172 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 HAUS3Q68CZ6 603 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 SLC36A4Q6YBV0 504 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 ZNF783Q6ZMS7 281 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 NEK10Q6ZWH5 1172 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 MRGPRGQ86SM5 289 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 FAM90A1Q86YD7 464 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 YAF2Q8IY57 180 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 CCDC13Q8IYE1 715 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 PQLC1Q8N2U9 271 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 TTC30BQ8N4P2 665 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 TSPYL6Q8N831 410 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 TNPO1Q92973 898 aaKnown RBP3.26□□□□□ -1.89
CSDE1-209ENST00000525132 EID2BQ96D98 161 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 RSPRY1Q96DX4 576 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 CHFRQ96EP1 664 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 TTC14Q96N46 770 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 CATSPER2Q96P56 530 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 CPPED1Q9BRF8 314 aaPredicted RBP3.26□□□□□ -1.89
CSDE1-209ENST00000525132 C1orf43Q9BWL3 253 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 SLC46A2Q9BY10 475 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 TEX101Q9BY14 249 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 SLITRK6Q9H5Y7 841 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 MLXIPQ9HAP2 919 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 SMURF2Q9HAU4 748 aa3.26□□□□□ -1.89
CSDE1-209ENST00000525132 RAVER2Q9HCJ3 691 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms