RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 CXCR5P32302 372 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 ETV3P41162 512 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 GPR1P46091 355 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 RXRGP48443 463 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 STC1P52823 247 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 KIAA1024LP59773 190 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 PFN3P60673 137 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 GNG11P61952 73 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 PDE1BQ01064 536 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 PPARDQ03181 441 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 SNX1Q13596 522 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 INPP5AQ14642 412 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 NFATC4Q14934 902 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 QPCTQ16769 361 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 PARP6Q2NL67 630 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 WSCD2Q2TBF2 565 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 PPM1JQ5JR12 505 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 FAXCQ5TGI0 409 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 ZDHHC20Q5W0Z9 365 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 PSAPL1Q6NUJ1 521 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 ESRP1Q6NXG1 681 aaKnown RBP5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 CRTC1Q6UUV9 634 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 C4orf22Q6V702 233 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 ZNF765Q7L2R6 523 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 GLT6D1Q7Z4J2 308 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 HSD11B1LQ7Z5J1 315 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 TSPAN33Q86UF1 283 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 SLC35F6Q8N357 371 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 SLC25A41Q8N5S1 370 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 TP53I13Q8NBR0 393 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 DEFB124Q8NES8 71 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 SPATA22Q8NHS9 363 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 SLC35B2Q8TB61 432 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 CCDC110Q8TBZ0 833 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 RHBDD1Q8TEB9 315 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 SCG3Q8WXD2 468 aaKnown RBP5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 ATG4AQ8WYN0 398 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 GLMNQ92990 594 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 VOPP1Q96AW1 172 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 CENPTQ96BT3 561 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 AP2M1Q96CW1 435 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 TRIM44Q96DX7 344 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 COQ10AQ96MF6 247 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 WDR92Q96MX6 357 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 LYSMD1Q96S90 227 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 KLF6Q99612 283 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 HERPUD2Q9BSE4 406 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 TMEM121Q9BTD3 319 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 APOOQ9BUR5 198 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 FICDQ9BVA6 458 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 TLR10Q9BXR5 811 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 LRRC40Q9H9A6 602 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 IL21RQ9HBE5 538 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 ZFYVE1Q9HBF4 777 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 MAGEE1Q9HCI5 957 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 MBNL1Q9NR56 388 aaKnown RBP5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 DLL3Q9NYJ7 618 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 NCKIPSDQ9NZQ3 722 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 SPASTQ9UBP0 616 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 KLQ9UEF7 1012 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 FTSJ1Q9UET6 329 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 APOBEC3BQ9UH17 382 aaKnown RBP5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 FEZ2Q9UHY8 353 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 MOSPD1Q9UJG1 213 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 DOLKQ9UPQ8 538 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 PPIL1Q9Y3C6 166 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 PKP3Q9Y446 797 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 ZNF711Q9Y462 761 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 ZFHX2Q9C0A1 2572 aaPredicted RBP5.4□□□□□ -1.55
HMGB1P40-201ENST00000525121 CHD5Q8TDI0 1954 aa5.4□□□□□ -1.55
HMGB1P40-201ENST00000525121 TCRBV7S2A1N4TA0A589 114 aa5.39□□□□□ -1.55
HMGB1P40-201ENST00000525121 DCDC2BA2VCK2 349 aa5.39□□□□□ -1.55
HMGB1P40-201ENST00000525121 CTAGE9A4FU28 777 aa5.39□□□□□ -1.55
HMGB1P40-201ENST00000525121 C2orf81A6NN90 581 aa5.39□□□□□ -1.55
HMGB1P40-201ENST00000525121 ERI2A8K979 691 aaKnown RBP5.39□□□□□ -1.55
HMGB1P40-201ENST00000525121 CES2O00748 559 aa5.39□□□□□ -1.55
HMGB1P40-201ENST00000525121 SH3BP5O60239 455 aa5.39□□□□□ -1.55
HMGB1P40-201ENST00000525121 SDC3O75056 442 aa5.39□□□□□ -1.55
HMGB1P40-201ENST00000525121 PPFIA2O75334 1257 aa5.39□□□□□ -1.55
HMGB1P40-201ENST00000525121 GCATO75600 419 aa5.39□□□□□ -1.55
HMGB1P40-201ENST00000525121 CLDN7O95471 211 aa5.39□□□□□ -1.55
HMGB1P40-201ENST00000525121 CRTAMO95727 393 aa5.39□□□□□ -1.55
HMGB1P40-201ENST00000525121 PRLP01236 227 aa5.39□□□□□ -1.55
HMGB1P40-201ENST00000525121 TNFP01375 233 aa5.39□□□□□ -1.55
HMGB1P40-201ENST00000525121 CSF2P04141 144 aa5.39□□□□□ -1.55
HMGB1P40-201ENST00000525121 ANXA6P08133 673 aa5.39□□□□□ -1.55
HMGB1P40-201ENST00000525121 C1SP09871 688 aa5.39□□□□□ -1.55
HMGB1P40-201ENST00000525121 PIRTP0C851 137 aa5.39□□□□□ -1.55
HMGB1P40-201ENST00000525121 MYCLP1P12525 358 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P40-201ENST00000525121 CD59P13987 128 aa5.39□□□□□ -1.55
HMGB1P40-201ENST00000525121 NME1P15531 152 aaKnown RBP5.39□□□□□ -1.55
HMGB1P40-201ENST00000525121 JUNDP17535 347 aa5.39□□□□□ -1.55
HMGB1P40-201ENST00000525121 TEAD1P28347 426 aa5.39□□□□□ -1.55
HMGB1P40-201ENST00000525121 CD68P34810 354 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P40-201ENST00000525121 FDFT1P37268 417 aa5.39□□□□□ -1.55
HMGB1P40-201ENST00000525121 RPIAP49247 311 aa5.39□□□□□ -1.55
HMGB1P40-201ENST00000525121 DCDC1P59894 354 aa5.39□□□□□ -1.55
HMGB1P40-201ENST00000525121 SIM1P81133 766 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P40-201ENST00000525121 BNC1Q01954 994 aa5.39□□□□□ -1.55
HMGB1P40-201ENST00000525121 DPTQ07507 201 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms