RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 COQ10AQ96MF6 247 aa12.84□□□□□ -0.35
VEGFA-224ENST00000523873 LENG8Q96PV6 779 aaPredicted RBP12.84□□□□□ -0.35
VEGFA-224ENST00000523873 ADGRE3Q9BY15 652 aa12.84□□□□□ -0.35
VEGFA-224ENST00000523873 RPL26L1Q9UNX3 145 aaKnown RBP12.84□□□□□ -0.35
VEGFA-224ENST00000523873 SHOC2Q9UQ13 582 aa12.84□□□□□ -0.35
VEGFA-224ENST00000523873 C1orf232A0A0U1RR37 186 aa12.83□□□□□ -0.36
VEGFA-224ENST00000523873 A6NNZ2 444 aa12.83□□□□□ -0.36
VEGFA-224ENST00000523873 C4orf47A7E2U8 309 aa12.83□□□□□ -0.36
VEGFA-224ENST00000523873 TLR4O00206 839 aa12.83□□□□□ -0.36
VEGFA-224ENST00000523873 PGRMC1O00264 195 aaKnown RBP12.83□□□□□ -0.36
VEGFA-224ENST00000523873 FPGTO14772 594 aa12.83□□□□□ -0.36
VEGFA-224ENST00000523873 AURKAO14965 403 aa12.83□□□□□ -0.36
VEGFA-224ENST00000523873 ITGAVP06756 1048 aa12.83□□□□□ -0.36
VEGFA-224ENST00000523873 SYPP08247 313 aa12.83□□□□□ -0.36
VEGFA-224ENST00000523873 CTSKP43235 329 aa12.83□□□□□ -0.36
VEGFA-224ENST00000523873 ATXN3P54252 364 aaPredicted RBP12.83□□□□□ -0.36
VEGFA-224ENST00000523873 LMNB2Q03252 620 aa12.83□□□□□ -0.36
VEGFA-224ENST00000523873 PTSQ03393 145 aa12.83□□□□□ -0.36
VEGFA-224ENST00000523873 PRPSAP1Q14558 356 aa12.83□□□□□ -0.36
VEGFA-224ENST00000523873 LRRC14Q15048 493 aa12.83□□□□□ -0.36
VEGFA-224ENST00000523873 PARP6Q2NL67 630 aa12.83□□□□□ -0.36
VEGFA-224ENST00000523873 HLA-BQ31612 363 aa12.83□□□□□ -0.36
VEGFA-224ENST00000523873 P3H1Q32P28 736 aa12.83□□□□□ -0.36
VEGFA-224ENST00000523873 STPG1Q5TH74 334 aa12.83□□□□□ -0.36
VEGFA-224ENST00000523873 PAPD7Q5XG87 772 aaKnown RBP12.83□□□□□ -0.36
VEGFA-224ENST00000523873 KYAT3Q6YP21 454 aaKnown RBP12.83□□□□□ -0.36
VEGFA-224ENST00000523873 ABI3BPQ7Z7G0 1075 aa12.83□□□□□ -0.36
VEGFA-224ENST00000523873 CBARPQ8N350 705 aaPredicted RBP12.83□□□□□ -0.36
VEGFA-224ENST00000523873 DENND6BQ8NEG7 585 aa12.83□□□□□ -0.36
VEGFA-224ENST00000523873 ACTRT1Q8TDG2 376 aa12.83□□□□□ -0.36
VEGFA-224ENST00000523873 RTP4Q96DX8 246 aa12.83□□□□□ -0.36
VEGFA-224ENST00000523873 DTD2Q96FN9 168 aa12.83□□□□□ -0.36
VEGFA-224ENST00000523873 C1QTNF7Q9BXJ2 289 aa12.83□□□□□ -0.36
VEGFA-224ENST00000523873 FSD1LQ9BXM9 530 aa12.83□□□□□ -0.36
VEGFA-224ENST00000523873 GAREM1Q9H706 876 aa12.83□□□□□ -0.36
VEGFA-224ENST00000523873 TMEM9BQ9NQ34 198 aa12.83□□□□□ -0.36
VEGFA-224ENST00000523873 FNDC3AQ9Y2H6 1198 aaKnown RBP12.83□□□□□ -0.36
VEGFA-224ENST00000523873 ZNF711Q9Y462 761 aa12.83□□□□□ -0.36
VEGFA-224ENST00000523873 HS3ST3A1Q9Y663 406 aa12.83□□□□□ -0.36
VEGFA-224ENST00000523873 CTAGE9A4FU28 777 aa12.82□□□□□ -0.36
VEGFA-224ENST00000523873 GOLGA6CA6NDK9 693 aa12.82□□□□□ -0.36
VEGFA-224ENST00000523873 GOLGA6BA6NDN3 693 aa12.82□□□□□ -0.36
VEGFA-224ENST00000523873 K7ESM1 405 aa12.82□□□□□ -0.36
VEGFA-224ENST00000523873 ANXA9O76027 345 aa12.82□□□□□ -0.36
VEGFA-224ENST00000523873 GOLGA6DP0CG33 693 aa12.82□□□□□ -0.36
VEGFA-224ENST00000523873 TCP1P17987 556 aaKnown RBP12.82□□□□□ -0.36
VEGFA-224ENST00000523873 NFKBIAP25963 317 aa12.82□□□□□ -0.36
VEGFA-224ENST00000523873 STIP1P31948 543 aaKnown RBP12.82□□□□□ -0.36
VEGFA-224ENST00000523873 RPL22P35268 128 aaKnown RBP12.82□□□□□ -0.36
VEGFA-224ENST00000523873 ADRA1AP35348 466 aa12.82□□□□□ -0.36
VEGFA-224ENST00000523873 STC1P52823 247 aa12.82□□□□□ -0.36
VEGFA-224ENST00000523873 TERF1P54274 439 aa12.82□□□□□ -0.36
VEGFA-224ENST00000523873 PFN3P60673 137 aa12.82□□□□□ -0.36
VEGFA-224ENST00000523873 PDE1CQ14123 709 aaPredicted RBP12.82□□□□□ -0.36
VEGFA-224ENST00000523873 INPP5AQ14642 412 aa12.82□□□□□ -0.36
VEGFA-224ENST00000523873 SHBQ15464 509 aa12.82□□□□□ -0.36
VEGFA-224ENST00000523873 TRIP13Q15645 432 aaPredicted RBP12.82□□□□□ -0.36
VEGFA-224ENST00000523873 SLC1A5Q15758 541 aa12.82□□□□□ -0.36
VEGFA-224ENST00000523873 ZNF542PQ5EBM4 170 aa12.82□□□□□ -0.36
VEGFA-224ENST00000523873 CCDC70Q6NSX1 233 aa12.82□□□□□ -0.36
VEGFA-224ENST00000523873 DRICH1Q6PGQ1 229 aaPredicted RBP12.82□□□□□ -0.36
VEGFA-224ENST00000523873 SYT10Q6XYQ8 523 aa12.82□□□□□ -0.36
VEGFA-224ENST00000523873 GSTA5Q7RTV2 222 aa12.82□□□□□ -0.36
VEGFA-224ENST00000523873 TECPR1Q7Z6L1 1165 aa12.82□□□□□ -0.36
VEGFA-224ENST00000523873 PDCD7Q8N8D1 485 aaKnown RBP12.82□□□□□ -0.36
VEGFA-224ENST00000523873 CCDC89Q8N998 374 aa12.82□□□□□ -0.36
VEGFA-224ENST00000523873 MAGOHBQ96A72 148 aaKnown RBP12.82□□□□□ -0.36
VEGFA-224ENST00000523873 EID2BQ96D98 161 aa12.82□□□□□ -0.36
VEGFA-224ENST00000523873 LYSMD1Q96S90 227 aa12.82□□□□□ -0.36
VEGFA-224ENST00000523873 AGAP2Q99490 1192 aa12.82□□□□□ -0.36
VEGFA-224ENST00000523873 TBL1YQ9BQ87 522 aa12.82□□□□□ -0.36
VEGFA-224ENST00000523873 ABCG8Q9H221 673 aa12.82□□□□□ -0.36
VEGFA-224ENST00000523873 ETNK1Q9HBU6 452 aa12.82□□□□□ -0.36
VEGFA-224ENST00000523873 PIH1D1Q9NWS0 290 aaKnown RBP12.82□□□□□ -0.36
VEGFA-224ENST00000523873 GOLGA6AQ9NYA3 693 aa12.82□□□□□ -0.36
VEGFA-224ENST00000523873 TTC7AQ9ULT0 858 aaPredicted RBP12.82□□□□□ -0.36
VEGFA-224ENST00000523873 DRG1Q9Y295 367 aaKnown RBP12.82□□□□□ -0.36
VEGFA-224ENST00000523873 ZKSCAN5Q9Y2L8 839 aa12.82□□□□□ -0.36
VEGFA-224ENST00000523873 AAR2Q9Y312 384 aaKnown RBP12.82□□□□□ -0.36
VEGFA-224ENST00000523873 OR1A2Q9Y585 309 aa12.82□□□□□ -0.36
VEGFA-224ENST00000523873 ARID1BQ8NFD5 2236 aaPredicted RBP12.82□□□□□ -0.36
VEGFA-224ENST00000523873 GVINP1Q7Z2Y8 2422 aa12.82□□□□□ -0.36
VEGFA-224ENST00000523873 PSMD11O00231 422 aa12.81□□□□□ -0.36
VEGFA-224ENST00000523873 PDE2AO00408 941 aaPredicted RBP12.81□□□□□ -0.36
VEGFA-224ENST00000523873 CES2O00748 559 aa12.81□□□□□ -0.36
VEGFA-224ENST00000523873 BUD23O43709 281 aaKnown RBP12.81□□□□□ -0.36
VEGFA-224ENST00000523873 ZNF189O75820 626 aaPredicted RBP12.81□□□□□ -0.36
VEGFA-224ENST00000523873 ZNF30P17039 623 aa12.81□□□□□ -0.36
VEGFA-224ENST00000523873 CASQ1P31415 396 aa12.81□□□□□ -0.36
VEGFA-224ENST00000523873 COILP38432 576 aaPredicted RBP12.81□□□□□ -0.36
VEGFA-224ENST00000523873 VPS41P49754 854 aa12.81□□□□□ -0.36
VEGFA-224ENST00000523873 AGERQ15109 404 aa12.81□□□□□ -0.36
VEGFA-224ENST00000523873 RSPO4Q2I0M5 234 aaPredicted RBP12.81□□□□□ -0.36
VEGFA-224ENST00000523873 ZNF423Q2M1K9 1284 aa12.81□□□□□ -0.36
VEGFA-224ENST00000523873 ALS2CLQ60I27 953 aa12.81□□□□□ -0.36
VEGFA-224ENST00000523873 KCTD11Q693B1 232 aa12.81□□□□□ -0.36
VEGFA-224ENST00000523873 IQCHQ86VS3 1027 aa12.81□□□□□ -0.36
VEGFA-224ENST00000523873 CREG2Q8IUH2 290 aa12.81□□□□□ -0.36
VEGFA-224ENST00000523873 KLHDC8BQ8IXV7 354 aa12.81□□□□□ -0.36
VEGFA-224ENST00000523873 BLOC1S5Q8TDH9 187 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms