RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 COL9A1P20849 921 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 ARL8AQ96BM9 186 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 TADA1Q96BN2 335 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 SIPA1Q96FS4 1042 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 KIFC1Q9BW19 673 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 PLAC1Q9HBJ0 212 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 FBXO6Q9NRD1 293 aaPredicted RBP9.35□□□□□ -0.91
SDCBP-212ENST00000523483 SMYD2Q9NRG4 433 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 CRYL1Q9Y2S2 319 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 ANKRD36A6QL64 1941 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 VPS13AQ96RL7 3174 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 BPTFQ12830 3046 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 ZCWPW2A0A1B0GU75 182 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 CCDC162PA2VCL2 907 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 MAN2B1O00754 1011 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 FZD6O60353 706 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 MMP20O60882 483 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 LHCGRP22888 699 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 MC4RP32245 332 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 CSNK1DP48730 415 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 PGGT1BP53609 377 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 MPP1Q00013 466 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 STAT4Q14765 748 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 KLHL38Q2WGJ6 581 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 FAM46CQ5VWP2 391 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 NEPROQ6NW34 567 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 TRIM67Q6ZTA4 783 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 Q6ZVL8 140 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 STRA8Q7Z7C7 330 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 TMEM135Q86UB9 458 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 CCNJLQ8IV13 435 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 SCAMP4Q969E2 229 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 SCRN2Q96FV2 425 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 HHIPQ96QV1 700 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 OSBPL1AQ9BXW6 950 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 ACSS3Q9H6R3 686 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 CD93Q9NPY3 652 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 FAM8A1Q9UBU6 413 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 SERGEFQ9UGK8 458 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 PPM1HQ9ULR3 514 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 NOVA2Q9UNW9 492 aaKnown RBP9.35□□□□□ -0.91
SDCBP-212ENST00000523483 SLC30A1Q9Y6M5 507 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 CAPN8A6NHC0 703 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 POLR3GO15318 223 aaPredicted RBP9.35□□□□□ -0.91
SDCBP-212ENST00000523483 SPAG6O75602 509 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 GOT2P00505 430 aaKnown RBP9.35□□□□□ -0.91
SDCBP-212ENST00000523483 CHRM1P11229 460 aaPredicted RBP9.35□□□□□ -0.91
SDCBP-212ENST00000523483 TIMP2P16035 220 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 ETV3P41162 512 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 PDE1BQ01064 536 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 MGAT5Q09328 741 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 TAF1AQ15573 450 aaPredicted RBP9.35□□□□□ -0.91
SDCBP-212ENST00000523483 CRTC1Q6UUV9 634 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 TMEM92Q6UXU6 159 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 SUGP1Q8IWZ8 645 aaKnown RBP9.35□□□□□ -0.91
SDCBP-212ENST00000523483 SRRM1Q8IYB3 904 aaKnown RBP9.35□□□□□ -0.91
SDCBP-212ENST00000523483 GPATCH11Q8N954 259 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 OR13J1Q8NGT2 312 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 ASB2Q96Q27 587 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 TPSD1Q9BZJ3 242 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 TBC1D17Q9HA65 648 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 TRPV5Q9NQA5 729 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 SLC2A4RGQ9NR83 387 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 C2orf42Q9NWW7 574 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 TSR3Q9UJK0 312 aaKnown RBP9.35□□□□□ -0.91
SDCBP-212ENST00000523483 MRPS17Q9Y2R5 130 aaKnown RBP9.35□□□□□ -0.91
SDCBP-212ENST00000523483 STARD13Q9Y3M8 1113 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 AGPSO00116 658 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 MAP2K7O14733 419 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 OPA1O60313 960 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 PRAMEF1O95521 474 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 ADRB3P13945 408 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 UGT1A6P19224 532 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 UGT1A1P22309 533 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 UGT1A4P22310 534 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 NFKBIAP25963 317 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 UGT1A3P35503 534 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 UGT1A5P35504 534 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 CDKN1CP49918 316 aaPredicted RBP9.34□□□□□ -0.91
SDCBP-212ENST00000523483 NEK3P51956 506 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 CCINQ13939 588 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 FASTKD1Q53R41 847 aaKnown RBP9.34□□□□□ -0.91
SDCBP-212ENST00000523483 ZNF776Q68DI1 518 aaPredicted RBP9.34□□□□□ -0.91
SDCBP-212ENST00000523483 ERN2Q76MJ5 926 aaKnown RBP9.34□□□□□ -0.91
SDCBP-212ENST00000523483 TRMT11Q7Z4G4 463 aaKnown RBP9.34□□□□□ -0.91
SDCBP-212ENST00000523483 SPNS2Q8IVW8 549 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 EID2BQ96D98 161 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 CDKN2AIPNLQ96HQ2 116 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 HACD3Q9P035 362 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 TBC1D3DA0A087WVF3 549 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 TBC1D3IA0A087WXS9 549 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 TBC1D3EA0A087X179 549 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 TBC1D3KA0A087X1G2 549 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 TBC1D3FA6NER0 549 aaPredicted RBP9.34□□□□□ -0.91
SDCBP-212ENST00000523483 TBC1D3LB9A6J9 549 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 NUDT17P0C025 328 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 TBC1D3HP0C7X1 549 aa9.34□□□□□ -0.91
SDCBP-212ENST00000523483 HNRNPLP14866 589 aaKnown RBP eCLIP9.34□□□□□ -0.91
SDCBP-212ENST00000523483 EIF3BP55884 814 aaKnown RBP9.34□□□□□ -0.91
SDCBP-212ENST00000523483 FBXO43Q4G163 708 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms