RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 NF1P21359 2839 aa6.52□□□□□ -1.37
VPS13B-211ENST00000522802 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-211ENST00000522802 TTC34A8MYJ7 566 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 K7ESM1 405 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 MSI1O43347 362 aaKnown RBP6.51□□□□□ -1.37
VPS13B-211ENST00000522802 NUAK1O60285 661 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 PIAS2O75928 621 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 ITGA2BP08514 1039 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 FAM163BP0C2L3 166 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 THEGLP0DJG4 465 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 PRLRP16471 622 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 GOT1P17174 413 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 GAP43P17677 238 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 TNNI1P19237 187 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 SLC5A2P31639 672 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 THBS2P35442 1172 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 CASP4P49662 377 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 NUMBP49757 651 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 KIF11P52732 1056 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 COG7P83436 770 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 CYP24A1Q07973 514 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 ZNF177Q13360 481 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-211ENST00000522802 PSMD6Q15008 389 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 SURF1Q15526 300 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 MPPE1Q53F39 396 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 HS1BP3Q53T59 392 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 RILPL1Q5EBL4 403 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 ZNF542PQ5EBM4 170 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 VASNQ6EMK4 673 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 RFWD3Q6PCD5 774 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 RBM44Q6ZP01 1051 aaKnown RBP6.51□□□□□ -1.37
VPS13B-211ENST00000522802 EFL1Q7Z2Z2 1120 aaKnown RBP6.51□□□□□ -1.37
VPS13B-211ENST00000522802 TADA2BQ86TJ2 420 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 IQCHQ86VS3 1027 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 C1QL4Q86Z23 238 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 TMEM151BQ8IW70 566 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 SLC22A18ASQ8N1D0 253 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 STK40Q8N2I9 435 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 NXPE1Q8N323 547 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 ARL14Q8N4G2 192 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 DTX3Q8N9I9 347 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 FAM184AQ8NB25 1140 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 SYAP1Q96A49 352 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-211ENST00000522802 LMLNQ96KR4 655 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 PRICKLE1Q96MT3 831 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-211ENST00000522802 DCLK3Q9C098 648 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 SLC25A18Q9H1K4 315 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 FZD3Q9NPG1 666 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 NLGN3Q9NZ94 848 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 CLIC5Q9NZA1 410 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 CYTH4Q9UIA0 394 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 INTS6Q9UL03 887 aaKnown RBP6.51□□□□□ -1.37
VPS13B-211ENST00000522802 ZKSCAN5Q9Y2L8 839 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 CACNA1DQ01668 2161 aa6.51□□□□□ -1.37
VPS13B-211ENST00000522802 TBC1D3DA0A087WVF3 549 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 TBC1D3IA0A087WXS9 549 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 TBC1D3EA0A087X179 549 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 TBC1D3KA0A087X1G2 549 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 FRMD3A2A2Y4 597 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 CPED1A4D0V7 1026 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 SH3D21A4FU49 640 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 TBC1D3FA6NER0 549 aaPredicted RBP6.5□□□□□ -1.37
VPS13B-211ENST00000522802 ZNF839A8K0R7 811 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 ZNF891A8MT65 544 aaPredicted RBP6.5□□□□□ -1.37
VPS13B-211ENST00000522802 TBC1D3LB9A6J9 549 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 FFAR3O14843 346 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 RNASEH1O60930 286 aaKnown RBP6.5□□□□□ -1.37
VPS13B-211ENST00000522802 VNN1O95497 513 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 ATP5BP06576 529 aaKnown RBP6.5□□□□□ -1.37
VPS13B-211ENST00000522802 TBC1D3HP0C7X1 549 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 RNF224P0DH78 156 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 RALAP11233 206 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 HGFP14210 728 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 IDEP14735 1019 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 POLR2EP19388 210 aaKnown RBP6.5□□□□□ -1.37
VPS13B-211ENST00000522802 SLC6A4P31645 630 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 CASRP41180 1078 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 CSKP41240 450 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 SCNN1BP51168 640 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 CYP2J2P51589 502 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 HMGN5P82970 282 aaKnown RBP6.5□□□□□ -1.37
VPS13B-211ENST00000522802 OVGP1Q12889 678 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 TRPC3Q13507 836 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 BMT2Q1RMZ1 405 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 SKOR2Q2VWA4 1001 aaPredicted RBP6.5□□□□□ -1.37
VPS13B-211ENST00000522802 PRR31Q5SQ13 230 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 CATSPEREQ5SY80 951 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 AGBL4Q5VU57 503 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 TBC1D3GQ6DHY5 549 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 TBC1D3CQ6IPX1 549 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 MMS22LQ6ZRQ5 1243 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 RSRC2Q7L4I2 434 aaKnown RBP6.5□□□□□ -1.37
VPS13B-211ENST00000522802 BHLHA9Q7RTU4 235 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 LRRC56Q8IYG6 542 aaPredicted RBP6.5□□□□□ -1.37
VPS13B-211ENST00000522802 TBC1D3Q8IZP1 549 aaPredicted RBP6.5□□□□□ -1.37
VPS13B-211ENST00000522802 ZNF276Q8N554 614 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 ZNF548Q8NEK5 533 aaPredicted RBP6.5□□□□□ -1.37
VPS13B-211ENST00000522802 WDR36Q8NI36 951 aaKnown RBP6.5□□□□□ -1.37
VPS13B-211ENST00000522802 FAM131CQ96AQ9 280 aa6.5□□□□□ -1.37
VPS13B-211ENST00000522802 MYEOVQ96EZ4 313 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms