RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 ASCL3Q9NQ33 180 aa18.48■□□□□ 0.55
TOP1MT-216ENST00000522121 MRPL40Q9NQ50 206 aaKnown RBP18.48■□□□□ 0.55
TOP1MT-216ENST00000522121 PCDHGA8Q9Y5G5 932 aa18.48■□□□□ 0.55
TOP1MT-216ENST00000522121 CCDC187A0A096LP49 1063 aa18.47■□□□□ 0.55
TOP1MT-216ENST00000522121 PRSS38A1L453 326 aa18.47■□□□□ 0.55
TOP1MT-216ENST00000522121 TMX2-CTNND1H3BSU7 103 aa18.47■□□□□ 0.55
TOP1MT-216ENST00000522121 NTN3O00634 580 aaPredicted RBP18.47■□□□□ 0.55
TOP1MT-216ENST00000522121 PROSCO94903 275 aa18.47■□□□□ 0.55
TOP1MT-216ENST00000522121 CD48P09326 243 aa18.47■□□□□ 0.55
TOP1MT-216ENST00000522121 CES1P23141 567 aa18.47■□□□□ 0.55
TOP1MT-216ENST00000522121 HNRNPH3P31942 346 aaKnown RBP18.47■□□□□ 0.55
TOP1MT-216ENST00000522121 ETV3P41162 512 aa18.47■□□□□ 0.55
TOP1MT-216ENST00000522121 GARSP41250 739 aaKnown RBP18.47■□□□□ 0.55
TOP1MT-216ENST00000522121 UCNP55089 124 aa18.47■□□□□ 0.55
TOP1MT-216ENST00000522121 DPYSL3Q14195 570 aa18.47■□□□□ 0.55
TOP1MT-216ENST00000522121 ZSCAN23Q3MJ62 389 aa18.47■□□□□ 0.55
TOP1MT-216ENST00000522121 KCTD16Q68DU8 428 aa18.47■□□□□ 0.55
TOP1MT-216ENST00000522121 FOXR1Q6PIV2 292 aa18.47■□□□□ 0.55
TOP1MT-216ENST00000522121 GPR156Q8NFN8 814 aa18.47■□□□□ 0.55
TOP1MT-216ENST00000522121 KCNE4Q8WWG9 221 aa18.47■□□□□ 0.55
TOP1MT-216ENST00000522121 DTD2Q96FN9 168 aa18.47■□□□□ 0.55
TOP1MT-216ENST00000522121 SEMA3CQ99985 751 aa18.47■□□□□ 0.55
TOP1MT-216ENST00000522121 ZNF670Q9BS34 389 aa18.47■□□□□ 0.55
TOP1MT-216ENST00000522121 XPO4Q9C0E2 1151 aaKnown RBP18.47■□□□□ 0.55
TOP1MT-216ENST00000522121 TMEM168Q9H0V1 697 aa18.47■□□□□ 0.55
TOP1MT-216ENST00000522121 DPEP2Q9H4A9 486 aa18.47■□□□□ 0.55
TOP1MT-216ENST00000522121 DEF6Q9H4E7 631 aa18.47■□□□□ 0.55
TOP1MT-216ENST00000522121 LRRK1Q38SD2 2015 aa18.47■□□□□ 0.55
TOP1MT-216ENST00000522121 GOLGA6CA6NDK9 693 aa18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 GOLGA6BA6NDN3 693 aa18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 NPIPB15A6NHN6 443 aaPredicted RBP18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 CBFA2T2O43439 604 aa18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 MFSD11O43934 449 aa18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 RPLP0P05388 317 aaKnown RBP18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 KRT7P08729 469 aa18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 GOLGA6DP0CG33 693 aa18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 GLB1P16278 677 aa18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 MLLT3P42568 568 aaPredicted RBP18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 ARSEP51690 589 aa18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 GALNT2Q10471 571 aa18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 TRIM14Q14142 442 aa18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 PAFAH1B3Q15102 231 aaKnown RBP18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 SLC18A3Q16572 532 aa18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 IFI16Q16666 785 aaKnown RBP18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 ATP13A4Q4VNC1 1196 aa18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 ANKRD20A8PQ5CZ79 823 aa18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 ZFYVE27Q5T4F4 411 aa18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 NCBP2-AS2Q69YL0 99 aa18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 OGFOD3Q6PK18 319 aa18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 GPR155Q7Z3F1 870 aa18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 HSD11B1LQ7Z5J1 315 aa18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 HEATR4Q86WZ0 1026 aa18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 PELI3Q8N2H9 469 aa18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 CBARPQ8N350 705 aaPredicted RBP18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 KIAA1524Q8TCG1 905 aa18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 CCDC97Q96F63 343 aaPredicted RBP18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 MCCC1Q96RQ3 725 aaPredicted RBP18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 TEX101Q9BY14 249 aa18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 DPH1Q9BZG8 443 aa18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 STRADBQ9C0K7 418 aa18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 CARS2Q9HA77 564 aaKnown RBP18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 ZNHIT6Q9NWK9 470 aaKnown RBP18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 GOLGA6AQ9NYA3 693 aa18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 RABGEF1Q9UJ41 708 aa18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 NENFQ9UMX5 172 aa18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 PPIL1Q9Y3C6 166 aa18.46■□□□□ 0.55
TOP1MT-216ENST00000522121 A0A1W2PNU3 283 aaPredicted RBP18.45■□□□□ 0.54
TOP1MT-216ENST00000522121 B4DGG1 531 aa18.45■□□□□ 0.54
TOP1MT-216ENST00000522121 D6RAR5 112 aa18.45■□□□□ 0.54
TOP1MT-216ENST00000522121 MATN3O15232 486 aa18.45■□□□□ 0.54
TOP1MT-216ENST00000522121 CTPS1P17812 591 aa18.45■□□□□ 0.54
TOP1MT-216ENST00000522121 CA4P22748 312 aa18.45■□□□□ 0.54
TOP1MT-216ENST00000522121 LHCGRP22888 699 aa18.45■□□□□ 0.54
TOP1MT-216ENST00000522121 CCNCP24863 283 aa18.45■□□□□ 0.54
TOP1MT-216ENST00000522121 PDX1P52945 283 aa18.45■□□□□ 0.54
TOP1MT-216ENST00000522121 EPHB1P54762 984 aa18.45■□□□□ 0.54
TOP1MT-216ENST00000522121 CXADRP78310 365 aa18.45■□□□□ 0.54
TOP1MT-216ENST00000522121 CCL7P80098 99 aa18.45■□□□□ 0.54
TOP1MT-216ENST00000522121 ILF3Q12906 894 aaKnown RBP eCLIP18.45■□□□□ 0.54
TOP1MT-216ENST00000522121 SKOR2Q2VWA4 1001 aaPredicted RBP18.45■□□□□ 0.54
TOP1MT-216ENST00000522121 C14orf28Q4W4Y0 310 aa18.45■□□□□ 0.54
TOP1MT-216ENST00000522121 SPECC1LQ69YQ0 1117 aa18.45■□□□□ 0.54
TOP1MT-216ENST00000522121 RAET1GQ6H3X3 334 aa18.45■□□□□ 0.54
TOP1MT-216ENST00000522121 Q6ZVL8 140 aa18.45■□□□□ 0.54
TOP1MT-216ENST00000522121 CCNJLQ8IV13 435 aa18.45■□□□□ 0.54
TOP1MT-216ENST00000522121 OR8K1Q8NGG5 319 aa18.45■□□□□ 0.54
TOP1MT-216ENST00000522121 PIH1D2Q8WWB5 315 aa18.45■□□□□ 0.54
TOP1MT-216ENST00000522121 LIN37Q96GY3 246 aaPredicted RBP18.45■□□□□ 0.54
TOP1MT-216ENST00000522121 TMEM74Q96NL1 305 aa18.45■□□□□ 0.54
TOP1MT-216ENST00000522121 BBC3Q96PG8 261 aaPredicted RBP18.45■□□□□ 0.54
TOP1MT-216ENST00000522121 LRRN3Q9H3W5 708 aa18.45■□□□□ 0.54
TOP1MT-216ENST00000522121 EPB41L5Q9HCM4 733 aa18.45■□□□□ 0.54
TOP1MT-216ENST00000522121 AMACRQ9UHK6 382 aa18.45■□□□□ 0.54
TOP1MT-216ENST00000522121 APPL1Q9UKG1 709 aa18.45■□□□□ 0.54
TOP1MT-216ENST00000522121 TTLL3Q9Y4R7 772 aa18.45■□□□□ 0.54
TOP1MT-216ENST00000522121 ANKRD36A6QL64 1941 aa18.45■□□□□ 0.54
TOP1MT-216ENST00000522121 TEX51A0A1B0GUA7 166 aa18.44■□□□□ 0.54
TOP1MT-216ENST00000522121 CASC3O15234 703 aaKnown RBP18.44■□□□□ 0.54
TOP1MT-216ENST00000522121 KLK10O43240 276 aa18.44■□□□□ 0.54
TOP1MT-216ENST00000522121 TNFSF15O95150 251 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms