RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 MEIS2O14770 477 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 CER1O95813 267 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 KLKB1P03952 638 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 PGK2P07205 417 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 CYP3A4P08684 503 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 TBC1D3HP0C7X1 549 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 CHRNB1P11230 501 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 IGFBP2P18065 325 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 GJB2P29033 226 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 HOXA13P31271 388 aaPredicted RBP3.46□□□□□ -1.86
VPS13B-209ENST00000521559 PPM1AP35813 382 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 P2RX3P56373 397 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 NANOS2P60321 138 aaKnown RBP3.46□□□□□ -1.86
VPS13B-209ENST00000521559 CNTN2Q02246 1040 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 TNFAIP2Q03169 654 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 TRIM29Q14134 588 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 GALNT3Q14435 633 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 BECN1Q14457 450 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 ARHGEF16Q5VV41 709 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 MFSD14CQ5VZR4 134 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 TBC1D3GQ6DHY5 549 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 TBC1D3CQ6IPX1 549 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 FBXO46Q6PJ61 603 aaPredicted RBP3.46□□□□□ -1.86
VPS13B-209ENST00000521559 TBC1D3Q8IZP1 549 aaPredicted RBP3.46□□□□□ -1.86
VPS13B-209ENST00000521559 BLIDQ8IZY5 108 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 PELI3Q8N2H9 469 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 ZNF527Q8NB42 609 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 RAET1EQ8TD07 263 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 BICD2Q8TD16 824 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 RSC1A1Q92681 617 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 KIAA1191Q96A73 305 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 TMEM41AQ96HV5 264 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 C8orf76Q96K31 380 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 IWS1Q96ST2 819 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 RMDN3Q96TC7 470 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 PRPF18Q99633 342 aaKnown RBP3.46□□□□□ -1.86
VPS13B-209ENST00000521559 ZPBPQ9BS86 351 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 CCDC134Q9H6E4 229 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 AAMDCQ9H7C9 122 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 NRBP1Q9UHY1 535 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 KCNJ14Q9UNX9 436 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 SLC12A4Q9UP95 1085 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 GREB1LQ9C091 1923 aaPredicted RBP3.46□□□□□ -1.86
VPS13B-209ENST00000521559 TTC3P53804 2025 aa3.46□□□□□ -1.86
VPS13B-209ENST00000521559 CDK5RAP2Q96SN8 1893 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 THSD7BQ9C0I4 1608 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 CYP3A7-CYP3A51PA0A087WV96 503 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 LOC105369274A0A096LPK9 316 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 LOC102723532A0A0G2JNH3 316 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 RPS10-NUDT3A0A1W2PQS6 291 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 EME2A4GXA9 379 aaPredicted RBP3.45□□□□□ -1.86
VPS13B-209ENST00000521559 FOXO6A8MYZ6 492 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 BTBD18B2RXH4 712 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 H3BQV1 296 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 PCDH17O14917 1159 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 PIP5K1BO14986 540 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 MDM4O15151 490 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 FFAR2O15552 330 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 MSI1O43347 362 aaKnown RBP3.45□□□□□ -1.86
VPS13B-209ENST00000521559 EDIL3O43854 480 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 SKAP2O75563 359 aaPredicted RBP3.45□□□□□ -1.86
VPS13B-209ENST00000521559 STAM2O75886 525 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 KAT7O95251 611 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 SNAI1O95863 264 aaPredicted RBP3.45□□□□□ -1.86
VPS13B-209ENST00000521559 MMP1P03956 469 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 WNT1P04628 370 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 HSP90AA1P07900 732 aaKnown RBP3.45□□□□□ -1.86
VPS13B-209ENST00000521559 ALDOCP09972 364 aaKnown RBP3.45□□□□□ -1.86
VPS13B-209ENST00000521559 CYP3A7P24462 503 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 KRT2P35908 639 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 ANP32AP39687 249 aaKnown RBP3.45□□□□□ -1.86
VPS13B-209ENST00000521559 MLH1P40692 756 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 POLE2P56282 527 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 TAS2R50P59544 299 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 KRTAP10-9P60411 292 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 RPL15P61313 204 aaKnown RBP3.45□□□□□ -1.86
VPS13B-209ENST00000521559 ACVR2BQ13705 512 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 ZRSR2Q15696 482 aaKnown RBP3.45□□□□□ -1.86
VPS13B-209ENST00000521559 STXBP2Q15833 593 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 PDCD2Q16342 344 aaPredicted RBP3.45□□□□□ -1.86
VPS13B-209ENST00000521559 CCL14Q16627 93 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 UBE2SQ16763 222 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 GRAMD1BQ3KR37 738 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 ALG10Q5BKT4 473 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 ALG10BQ5I7T1 473 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 PRAMEF19Q5SWL8 479 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 MAP3K21Q5TCX8 1036 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 JAKMIP3Q5VZ66 844 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 PARM1Q6UWI2 310 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 ARMCX2Q7L311 632 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.45□□□□□ -1.86
VPS13B-209ENST00000521559 IGFN1Q86VF2 1251 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 DIS3L2Q8IYB7 885 aaKnown RBP3.45□□□□□ -1.86
VPS13B-209ENST00000521559 ADGRF3Q8IZF5 1079 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 FAM185AQ8N0U4 392 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 OR4N4Q8N0Y3 316 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 FBXL14Q8N1E6 418 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 CRYGNQ8WXF5 182 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 TRIB2Q92519 343 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 EME1Q96AY2 570 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 269.7 ms