RNA–Protein interactions for RNA: ENST00000521172.1

PTK2-229, Transcript of protein tyrosine kinase 2, human

TSL 5

Gene PTK2, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-229	ENST00000521172	DENND5B	Q6ZUT9	1274 aa		4.9	□□□□□ -1.63
PTK2-229	ENST00000521172	ZNF367	Q7RTV3	350 aa		4.9	□□□□□ -1.63
PTK2-229	ENST00000521172	PRPF39	Q86UA1	669 aa	Known RBP	4.9	□□□□□ -1.63
PTK2-229	ENST00000521172	TSPAN33	Q86UF1	283 aa		4.9	□□□□□ -1.63
PTK2-229	ENST00000521172	SRRM1	Q8IYB3	904 aa	Known RBP	4.9	□□□□□ -1.63
PTK2-229	ENST00000521172	RRNAD1	Q96FB5	475 aa	Known RBP	4.9	□□□□□ -1.63
PTK2-229	ENST00000521172	ZNF570	Q96NI8	536 aa		4.9	□□□□□ -1.63
PTK2-229	ENST00000521172	SPRTN	Q9H040	489 aa	Predicted RBP	4.9	□□□□□ -1.63
PTK2-229	ENST00000521172	ISCU	Q9H1K1	167 aa		4.9	□□□□□ -1.63
PTK2-229	ENST00000521172	SLC28A3	Q9HAS3	691 aa		4.9	□□□□□ -1.63
PTK2-229	ENST00000521172	PAG1	Q9NWQ8	432 aa		4.9	□□□□□ -1.63
PTK2-229	ENST00000521172	TRNAU1AP	Q9NX07	287 aa	Known RBP	4.9	□□□□□ -1.63
PTK2-229	ENST00000521172	GIMAP2	Q9UG22	337 aa		4.9	□□□□□ -1.63
PTK2-229	ENST00000521172	SEC63	Q9UGP8	760 aa	Known RBP	4.9	□□□□□ -1.63
PTK2-229	ENST00000521172	PTRH2	Q9Y3E5	179 aa	Known RBP	4.9	□□□□□ -1.63
PTK2-229	ENST00000521172	MAU2	Q9Y6X3	613 aa		4.9	□□□□□ -1.63
PTK2-229	ENST00000521172	TTC3	P53804	2025 aa		4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	CTDSP2	O14595	271 aa		4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	VCY	O14598	125 aa		4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	ADAMDEC1	O15204	470 aa		4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	PON1	P27169	355 aa		4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	CHAT	P28329	748 aa		4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	EIF2S3	P41091	472 aa	Known RBP	4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	PIK3CA	P42336	1068 aa		4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	SUOX	P51687	545 aa		4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	MRPL12	P52815	198 aa	Known RBP	4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	HMGA2	P52926	109 aa		4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	MFAP4	P55083	255 aa		4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	NAB2	Q15742	525 aa		4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	PCGF3	Q3KNV8	242 aa		4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	ZSCAN23	Q3MJ62	389 aa		4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	GARNL3	Q5VVW2	1013 aa		4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	MORN5	Q5VZ52	161 aa		4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	DPPA4	Q7L190	304 aa		4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	KRT74	Q7RTS7	529 aa		4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	PATL1	Q86TB9	770 aa	Known RBP	4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	AACS	Q86V21	672 aa		4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	KBTBD6	Q86V97	674 aa		4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	RNF168	Q8IYW5	571 aa	Predicted RBP	4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	MMP21	Q8N119	569 aa		4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	MPLKIP	Q8TAP9	179 aa		4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	JAKMIP2	Q96AA8	810 aa		4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	SAT2	Q96F10	170 aa	Predicted RBP	4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	EGLN2	Q96KS0	407 aa		4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	GFM1	Q96RP9	751 aa	Known RBP	4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	ABHD1	Q96SE0	405 aa		4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	GAD1	Q99259	594 aa		4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	ACOX2	Q99424	681 aa		4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	IFIH1	Q9BYX4	1025 aa	Known RBP	4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	LTB4R2	Q9NPC1	389 aa		4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	FZD3	Q9NPG1	666 aa		4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	GPR108	Q9NPR9	543 aa		4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	DECR2	Q9NUI1	292 aa		4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	MTMR10	Q9NXD2	777 aa		4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	R3HDM2	Q9Y2K5	976 aa	Known RBP	4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	MAGED1	Q9Y5V3	778 aa	Predicted RBP	4.89	□□□□□ -1.63
PTK2-229	ENST00000521172	LY6G6E	A0A0G2JKS1	128 aa		4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	BECN2	A8MW95	431 aa		4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	UBE2C	O00762	179 aa		4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	JRK	O75564	520 aa		4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	NDUFB4	O95168	129 aa		4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	LCAT	P04180	440 aa		4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	SRPRA	P08240	638 aa	Known RBP	4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	ALDH7A1	P49419	539 aa	Known RBP	4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	TAS2R40	P59535	323 aa		4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	LRMP	Q12912	555 aa		4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	KLF9	Q13886	244 aa	Predicted RBP	4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	CTTN	Q14247	550 aa	Known RBP	4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	HNF4G	Q14541	408 aa		4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	SRSF7	Q16629	238 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	EIF2S3L	Q2VIR3	472 aa	Known RBP	4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	ZNF280D	Q6N043	979 aa		4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	SLC30A6	Q6NXT4	461 aa		4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	TEX11	Q8IYF3	940 aa		4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	SPATA6L	Q8N4H0	392 aa		4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	ARFGAP1	Q8N6T3	406 aa		4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	SCCPDH	Q8NBX0	429 aa		4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	CCDC191	Q8NCU4	936 aa		4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	AGBL3	Q8NEM8	1001 aa		4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	PIGO	Q8TEQ8	1089 aa		4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	LRRC59	Q96AG4	307 aa	Known RBP	4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	FIZ1	Q96SL8	496 aa		4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	NCAPG	Q9BPX3	1015 aa		4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	NDST4	Q9H3R1	872 aa		4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	WDR26	Q9H7D7	661 aa		4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	HINT3	Q9NQE9	182 aa	Known RBP	4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	MRPL15	Q9P015	296 aa	Known RBP	4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	ERVK-11	Q9UQG0	969 aa		4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	CMAHP	Q9Y471	501 aa		4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	HS3ST3B1	Q9Y662	390 aa		4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	CLIC4	Q9Y696	253 aa		4.88	□□□□□ -1.63
PTK2-229	ENST00000521172	KDM4E	B2RXH2	506 aa	Predicted RBP	4.87	□□□□□ -1.63
PTK2-229	ENST00000521172	TIMM23	O14925	209 aa		4.87	□□□□□ -1.63
PTK2-229	ENST00000521172	ATP2A1	O14983	1001 aa		4.87	□□□□□ -1.63
PTK2-229	ENST00000521172	MITF	O75030	526 aa	Predicted RBP	4.87	□□□□□ -1.63
PTK2-229	ENST00000521172	SOX30	O94993	753 aa		4.87	□□□□□ -1.63
PTK2-229	ENST00000521172	FGB	P02675	491 aa		4.87	□□□□□ -1.63
PTK2-229	ENST00000521172	G6PD	P11413	515 aa		4.87	□□□□□ -1.63
PTK2-229	ENST00000521172	ARSB	P15848	533 aa		4.87	□□□□□ -1.63
PTK2-229	ENST00000521172	TMEM11	P17152	192 aa		4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms