RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 VCPIP1Q96JH7 1222 aa9.36□□□□□ -0.91
CTNNA1-221ENST00000520339 TBATAQ96M53 351 aa9.36□□□□□ -0.91
CTNNA1-221ENST00000520339 CPEB1Q9BZB8 566 aaKnown RBP9.36□□□□□ -0.91
CTNNA1-221ENST00000520339 TCEAL2Q9H3H9 227 aaPredicted RBP9.36□□□□□ -0.91
CTNNA1-221ENST00000520339 PRORYQ9H606 182 aa9.36□□□□□ -0.91
CTNNA1-221ENST00000520339 CATSPERBQ9H7T0 1116 aa9.36□□□□□ -0.91
CTNNA1-221ENST00000520339 PDFQ9HBH1 243 aa9.36□□□□□ -0.91
CTNNA1-221ENST00000520339 PNMA8BQ9ULN7 279 aaPredicted RBP9.36□□□□□ -0.91
CTNNA1-221ENST00000520339 PCDHB1Q9Y5F3 818 aa9.36□□□□□ -0.91
CTNNA1-221ENST00000520339 RAI2Q9Y5P3 530 aa9.36□□□□□ -0.91
CTNNA1-221ENST00000520339 TSPAN11A1L157 253 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 EME2A4GXA9 379 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 ANKRD62A6NC57 917 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 J3KR12 359 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 TOR1BO14657 336 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 FGF10O15520 208 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 RRP8O43159 456 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 AQP9O43315 295 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 BUB1BO60566 1050 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 PRAMEF11O60813 436 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 PLXNA2O75051 1894 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 GCATO75600 419 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 CCDC172P0C7W6 258 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 TNFAIP3P21580 790 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 HTR7P34969 479 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 ACTN2P35609 894 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 NDST2P52849 883 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 PTK2BQ14289 1009 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 ACAP1Q15027 740 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 CDKN3Q16667 212 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 WSCD2Q2TBF2 565 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 DEFB133Q30KQ1 61 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 PLEKHA7Q6IQ23 1121 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 GUSBP11Q6P575 273 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 DCUN1D2Q6PH85 259 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 C20orf204Q6ZNR8 217 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 VPS36Q86VN1 386 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 ZNF354CQ86Y25 554 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 WDFY3Q8IZQ1 3526 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 RBFAQ8N0V3 343 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 MAPK15Q8TD08 544 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 CXorf40AQ8TE69 158 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 BTN2A2Q8WVV5 523 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 EDARADDQ8WWZ3 215 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 HIC2Q96JB3 615 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 DEPDC7Q96QD5 511 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 C1QTNF7Q9BXJ2 289 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 TSPY26PQ9H489 355 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 GPATCH2LQ9NWQ4 482 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 DONSONQ9NYP3 566 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 UBP1Q9NZI7 540 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 NCKIPSDQ9NZQ3 722 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 SPASTQ9UBP0 616 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 UBA2Q9UBT2 640 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 MYO6Q9UM54 1294 aa9.35□□□□□ -0.91
CTNNA1-221ENST00000520339 PTPRBP23467 1997 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 CPED1A4D0V7 1026 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 EIF3CLB5ME19 914 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 LMO7DNF2Z398 122 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 H3BRJ5 948 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 LINC01387J3KSC0 135 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 M0R082 166 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 YY2O15391 372 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 CSO75390 466 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 PIGNO95427 931 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 MPOP05164 745 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 PSMA2P25787 234 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 ARNTP27540 789 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 LSSP48449 732 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 CSNK1DP48730 415 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 PEX5P50542 639 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 PAPOLAP51003 745 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 THOP1P52888 689 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 ADKP55263 362 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 TPI1P60174 286 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 C1orf61Q13536 156 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 NR0B2Q15466 257 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 CA9Q16790 459 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 UGP2Q16851 508 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 ISXQ2M1V0 245 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 AFMIDQ63HM1 303 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 PPP1R2P3Q6NXS1 205 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 MACC1Q6ZN28 852 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 C8orf86Q6ZUL3 223 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 EFL1Q7Z2Z2 1120 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 DNAAF5Q86Y56 855 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 PHACTR4Q8IZ21 702 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 AOPEPQ8N6M6 819 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 ZNF417Q8TAU3 575 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 STK35Q8TDR2 534 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 CELF6Q96J87 481 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 EXOC2Q96KP1 924 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 ZNF578Q96N58 590 aaPredicted RBP9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 ZNF641Q96N77 438 aaPredicted RBP9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 PEBP4Q96S96 227 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 ZNF587Q96SQ5 575 aaPredicted RBP9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 EIF3CQ99613 913 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 IL12RB2Q99665 862 aa9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 WRAP53Q9BUR4 548 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-221ENST00000520339 LRRC61Q9BV99 259 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms