RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 MAXP61244 160 aa25.34■■□□□ 1.65
VEGFA-220ENST00000519767 TRAF2Q12933 501 aa25.34■■□□□ 1.65
VEGFA-220ENST00000519767 MMRN1Q13201 1228 aa25.34■■□□□ 1.65
VEGFA-220ENST00000519767 ARHGEF7Q14155 803 aa25.34■■□□□ 1.65
VEGFA-220ENST00000519767 PAFAH1B3Q15102 231 aaKnown RBP25.34■■□□□ 1.65
VEGFA-220ENST00000519767 BROXQ5VW32 411 aa25.34■■□□□ 1.65
VEGFA-220ENST00000519767 TIGD7Q6NT04 549 aaPredicted RBP25.34■■□□□ 1.65
VEGFA-220ENST00000519767 USP45Q70EL2 814 aa25.34■■□□□ 1.65
VEGFA-220ENST00000519767 H2AFVQ71UI9 128 aa25.34■■□□□ 1.65
VEGFA-220ENST00000519767 FATE1Q969F0 183 aa25.34■■□□□ 1.65
VEGFA-220ENST00000519767 CCDC74AQ96AQ1 378 aa25.34■■□□□ 1.65
VEGFA-220ENST00000519767 CCDC97Q96F63 343 aaPredicted RBP25.34■■□□□ 1.65
VEGFA-220ENST00000519767 GFM1Q96RP9 751 aaKnown RBP25.34■■□□□ 1.65
VEGFA-220ENST00000519767 MCCC1Q96RQ3 725 aaPredicted RBP25.34■■□□□ 1.65
VEGFA-220ENST00000519767 LGR4Q9BXB1 951 aa25.34■■□□□ 1.65
VEGFA-220ENST00000519767 TEX101Q9BY14 249 aa25.34■■□□□ 1.65
VEGFA-220ENST00000519767 CYP4F12Q9HCS2 524 aa25.34■■□□□ 1.65
VEGFA-220ENST00000519767 NT5MQ9NPB1 228 aa25.34■■□□□ 1.65
VEGFA-220ENST00000519767 AMACRQ9UHK6 382 aa25.34■■□□□ 1.65
VEGFA-220ENST00000519767 NENFQ9UMX5 172 aa25.34■■□□□ 1.65
VEGFA-220ENST00000519767 CCDC187A0A096LP49 1063 aa25.33■■□□□ 1.65
VEGFA-220ENST00000519767 MATN3O15232 486 aa25.33■■□□□ 1.65
VEGFA-220ENST00000519767 PROSCO94903 275 aa25.33■■□□□ 1.65
VEGFA-220ENST00000519767 KRT7P08729 469 aa25.33■■□□□ 1.65
VEGFA-220ENST00000519767 PNLIPP16233 465 aa25.33■■□□□ 1.65
VEGFA-220ENST00000519767 GLB1P16278 677 aa25.33■■□□□ 1.65
VEGFA-220ENST00000519767 TEAD1P28347 426 aa25.33■■□□□ 1.65
VEGFA-220ENST00000519767 GARSP41250 739 aaKnown RBP25.33■■□□□ 1.65
VEGFA-220ENST00000519767 GALNT2Q10471 571 aa25.33■■□□□ 1.65
VEGFA-220ENST00000519767 DPYSL3Q14195 570 aa25.33■■□□□ 1.65
VEGFA-220ENST00000519767 TCEA2Q15560 299 aa25.33■■□□□ 1.65
VEGFA-220ENST00000519767 LRRK1Q38SD2 2015 aa25.33■■□□□ 1.65
VEGFA-220ENST00000519767 ANKRD20A8PQ5CZ79 823 aa25.33■■□□□ 1.65
VEGFA-220ENST00000519767 NYAP1Q6ZVC0 841 aa25.33■■□□□ 1.65
VEGFA-220ENST00000519767 GPR155Q7Z3F1 870 aa25.33■■□□□ 1.65
VEGFA-220ENST00000519767 CTNNBL1Q8WYA6 563 aaPredicted RBP25.33■■□□□ 1.65
VEGFA-220ENST00000519767 DTD2Q96FN9 168 aa25.33■■□□□ 1.65
VEGFA-220ENST00000519767 FCRL3Q96P31 734 aaPredicted RBP25.33■■□□□ 1.65
VEGFA-220ENST00000519767 TSGA13Q96PP4 275 aa25.33■■□□□ 1.65
VEGFA-220ENST00000519767 POLR1EQ9GZS1 481 aaKnown RBP25.33■■□□□ 1.65
VEGFA-220ENST00000519767 TMEM168Q9H0V1 697 aa25.33■■□□□ 1.65
VEGFA-220ENST00000519767 MOSPD1Q9UJG1 213 aa25.33■■□□□ 1.65
VEGFA-220ENST00000519767 APPL1Q9UKG1 709 aa25.33■■□□□ 1.65
VEGFA-220ENST00000519767 TK2O00142 265 aa25.32■■□□□ 1.64
VEGFA-220ENST00000519767 CD48P09326 243 aa25.32■■□□□ 1.64
VEGFA-220ENST00000519767 CCNCP24863 283 aa25.32■■□□□ 1.64
VEGFA-220ENST00000519767 ITKQ08881 620 aa25.32■■□□□ 1.64
VEGFA-220ENST00000519767 EIF3IQ13347 325 aaKnown RBP25.32■■□□□ 1.64
VEGFA-220ENST00000519767 SLC18A3Q16572 532 aa25.32■■□□□ 1.64
VEGFA-220ENST00000519767 IFI16Q16666 785 aaKnown RBP25.32■■□□□ 1.64
VEGFA-220ENST00000519767 ZSCAN23Q3MJ62 389 aa25.32■■□□□ 1.64
VEGFA-220ENST00000519767 DENND2CQ68D51 928 aa25.32■■□□□ 1.64
VEGFA-220ENST00000519767 KCTD16Q68DU8 428 aa25.32■■□□□ 1.64
VEGFA-220ENST00000519767 LSM14AQ8ND56 463 aaKnown RBP25.32■■□□□ 1.64
VEGFA-220ENST00000519767 OR8K1Q8NGG5 319 aa25.32■■□□□ 1.64
VEGFA-220ENST00000519767 PIH1D2Q8WWB5 315 aa25.32■■□□□ 1.64
VEGFA-220ENST00000519767 KCNE4Q8WWG9 221 aa25.32■■□□□ 1.64
VEGFA-220ENST00000519767 LIN37Q96GY3 246 aaPredicted RBP25.32■■□□□ 1.64
VEGFA-220ENST00000519767 BBC3Q96PG8 261 aaPredicted RBP25.32■■□□□ 1.64
VEGFA-220ENST00000519767 SEMA3CQ99985 751 aa25.32■■□□□ 1.64
VEGFA-220ENST00000519767 ZNF670Q9BS34 389 aa25.32■■□□□ 1.64
VEGFA-220ENST00000519767 XPO4Q9C0E2 1151 aaKnown RBP25.32■■□□□ 1.64
VEGFA-220ENST00000519767 STRADBQ9C0K7 418 aa25.32■■□□□ 1.64
VEGFA-220ENST00000519767 SYNDIG1Q9H7V2 258 aa25.32■■□□□ 1.64
VEGFA-220ENST00000519767 MRPL40Q9NQ50 206 aaKnown RBP25.32■■□□□ 1.64
VEGFA-220ENST00000519767 TEX51A0A1B0GUA7 166 aa25.31■■□□□ 1.64
VEGFA-220ENST00000519767 A0A1W2PNU3 283 aaPredicted RBP25.31■■□□□ 1.64
VEGFA-220ENST00000519767 PRSS38A1L453 326 aa25.31■■□□□ 1.64
VEGFA-220ENST00000519767 NPIPB15A6NHN6 443 aaPredicted RBP25.31■■□□□ 1.64
VEGFA-220ENST00000519767 ETV3P41162 512 aa25.31■■□□□ 1.64
VEGFA-220ENST00000519767 CCL7P80098 99 aa25.31■■□□□ 1.64
VEGFA-220ENST00000519767 DPTQ07507 201 aa25.31■■□□□ 1.64
VEGFA-220ENST00000519767 SKOR2Q2VWA4 1001 aaPredicted RBP25.31■■□□□ 1.64
VEGFA-220ENST00000519767 ATP13A4Q4VNC1 1196 aa25.31■■□□□ 1.64
VEGFA-220ENST00000519767 CERCAMQ5T4B2 595 aa25.31■■□□□ 1.64
VEGFA-220ENST00000519767 HSD11B1LQ7Z5J1 315 aa25.31■■□□□ 1.64
VEGFA-220ENST00000519767 MAML1Q92585 1016 aa25.31■■□□□ 1.64
VEGFA-220ENST00000519767 PRR11Q96HE9 360 aaPredicted RBP25.31■■□□□ 1.64
VEGFA-220ENST00000519767 LRRN3Q9H3W5 708 aa25.31■■□□□ 1.64
VEGFA-220ENST00000519767 DPEP2Q9H4A9 486 aa25.31■■□□□ 1.64
VEGFA-220ENST00000519767 RABGEF1Q9UJ41 708 aa25.31■■□□□ 1.64
VEGFA-220ENST00000519767 CBFA2T2O43439 604 aa25.3■■□□□ 1.64
VEGFA-220ENST00000519767 FZD6O60353 706 aa25.3■■□□□ 1.64
VEGFA-220ENST00000519767 RPLP0P05388 317 aaKnown RBP25.3■■□□□ 1.64
VEGFA-220ENST00000519767 CEACAM5P06731 702 aa25.3■■□□□ 1.64
VEGFA-220ENST00000519767 MX2P20592 715 aa25.3■■□□□ 1.64
VEGFA-220ENST00000519767 PEX6Q13608 980 aa25.3■■□□□ 1.64
VEGFA-220ENST00000519767 TRIM14Q14142 442 aa25.3■■□□□ 1.64
VEGFA-220ENST00000519767 C14orf28Q4W4Y0 310 aa25.3■■□□□ 1.64
VEGFA-220ENST00000519767 NCBP2-AS2Q69YL0 99 aa25.3■■□□□ 1.64
VEGFA-220ENST00000519767 SPECC1LQ69YQ0 1117 aa25.3■■□□□ 1.64
VEGFA-220ENST00000519767 ALG1LQ6GMV1 187 aa25.3■■□□□ 1.64
VEGFA-220ENST00000519767 Q6ZVL8 140 aa25.3■■□□□ 1.64
VEGFA-220ENST00000519767 NLRP8Q86W28 1048 aa25.3■■□□□ 1.64
VEGFA-220ENST00000519767 HEATR4Q86WZ0 1026 aa25.3■■□□□ 1.64
VEGFA-220ENST00000519767 PELI3Q8N2H9 469 aa25.3■■□□□ 1.64
VEGFA-220ENST00000519767 KIAA1524Q8TCG1 905 aa25.3■■□□□ 1.64
VEGFA-220ENST00000519767 GPBAR1Q8TDU6 330 aa25.3■■□□□ 1.64
VEGFA-220ENST00000519767 NAF1Q96HR8 494 aaKnown RBP25.3■■□□□ 1.64
VEGFA-220ENST00000519767 TMEM74Q96NL1 305 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms