RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 FCRL2Q96LA5 508 aaPredicted RBP6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 ULBP1Q9BZM6 244 aa6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 TNKS2Q9H2K2 1166 aa6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 ZDHHC6Q9H6R6 413 aa6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 PDE7BQ9NP56 450 aa6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 KLQ9UEF7 1012 aa6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 TRPS1Q9UHF7 1281 aa6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 PADI1Q9ULC6 663 aa6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 FHOD1Q9Y613 1164 aa6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 LRP4O75096 1905 aa6.79□□□□□ -1.32
CTNNA1-216ENST00000519489 FER1L5A0AVI2 2057 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 ELOA3CA0A087WX78 387 aaPredicted RBP6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 ELOA3DA6NLF2 546 aaPredicted RBP6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 YJEFN3A6XGL0 299 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 C21orf140B9A014 251 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 E7ENQ6 273 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 CCER2I3L3R5 266 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 CLIC2O15247 247 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 SNAP91O60641 907 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 SPAG6O75602 509 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 SLCO2B1O94956 709 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 FAM13AO94988 1023 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 NDUFA10O95299 355 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 MOCS3O95396 460 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 TNFP01375 233 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 RRM1P23921 792 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 GKP32189 559 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 NNMTP40261 264 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 PSMA6P60900 246 aaKnown RBP6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 ATP1A4Q13733 1029 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 KRT32Q14532 448 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 ELOA3BQ3SY89 546 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 BMP2KLQ5H9B9 411 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 LYPLAL1Q5VWZ2 237 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 PM20D1Q6GTS8 502 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 BLOC1S2Q6QNY1 142 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 SPOCD1Q6ZMY3 1216 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 GPBP1Q86WP2 473 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 ZNF557Q8N988 423 aaPredicted RBP6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 ELOA3Q8NG57 546 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 CYFIP2Q96F07 1278 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 TAAR6Q96RI8 345 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 UCN2Q96RP3 112 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 PSMB7Q99436 277 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 APOOQ9BUR5 198 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 PLA2G12AQ9BZM1 189 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 KLHL3Q9UH77 587 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 LNPEPQ9UIQ6 1025 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 COQ6Q9Y2Z9 468 aa6.78□□□□□ -1.32
CTNNA1-216ENST00000519489 SERTM1A2A2V5 107 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 POM121CA8CG34 1229 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 AREL1O15033 823 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 CDC45O75419 566 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 ENDOD1O94919 500 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 AK4P27144 223 aaPredicted RBP6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 L1CAMP32004 1257 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 SPAM1P38567 509 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 TSFMP43897 325 aaKnown RBP6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 PEX5P50542 639 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 INPP5AQ14642 412 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 C3AR1Q16581 482 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 KYNUQ16719 465 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 KLHL40Q2TBA0 621 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 PDLIM3Q53GG5 364 aaPredicted RBP6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 BSPRYQ5W0U4 402 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 KRT79Q5XKE5 535 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 SYT9Q86SS6 491 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 CD163Q86VB7 1156 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 PIGZQ86VD9 579 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 WDR49Q8IV35 697 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 TMEM151BQ8IW70 566 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 LGI2Q8N0V4 545 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 PELI3Q8N2H9 469 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 CBARPQ8N350 705 aaPredicted RBP6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 ARFGAP1Q8N6T3 406 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 ATP11CQ8NB49 1132 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 PLA2G15Q8NCC3 412 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 PLEKHO2Q8TD55 490 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 MBD6Q96DN6 1003 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 ZNF274Q96GC6 653 aaPredicted RBP6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 FEM1AQ9BSK4 669 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 DUSP16Q9BY84 665 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 ZHX3Q9H4I2 956 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 DYRK4Q9NR20 520 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 BLOC1S4Q9NUP1 217 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 KCND2Q9NZV8 630 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 IL36AQ9UHA7 158 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 ZNF232Q9UNY5 417 aa6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 FARSAQ9Y285 508 aaKnown RBP6.77□□□□□ -1.33
CTNNA1-216ENST00000519489 A0A0G2JK05 382 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 FRMD3A2A2Y4 597 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 ADARB2-AS1A8MUL3 147 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 H7C1Q1 480 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 PHF1O43189 567 aaPredicted RBP6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 TSPAN6O43657 245 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 EIF5BO60841 1220 aaKnown RBP6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 VNN1O95497 513 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 ZBED1O96006 694 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 PRNPP04156 253 aa6.76□□□□□ -1.33
CTNNA1-216ENST00000519489 PLEKP08567 350 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms