RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 XYLT2Q9H1B5 865 aa8.52□□□□□ -1.05
PCM1-212ENST00000519253 CCM2LQ9NUG4 571 aaPredicted RBP8.52□□□□□ -1.05
PCM1-212ENST00000519253 FAM8A1Q9UBU6 413 aa8.52□□□□□ -1.05
PCM1-212ENST00000519253 HMGXB4Q9UGU5 601 aa8.52□□□□□ -1.05
PCM1-212ENST00000519253 ENOPH1Q9UHY7 261 aa8.52□□□□□ -1.05
PCM1-212ENST00000519253 SH3BP1Q9Y3L3 701 aa8.52□□□□□ -1.05
PCM1-212ENST00000519253 CENPXA8MT69 81 aa8.52□□□□□ -1.05
PCM1-212ENST00000519253 IFRD1O00458 451 aaPredicted RBP8.52□□□□□ -1.05
PCM1-212ENST00000519253 ATP4BP51164 291 aa8.52□□□□□ -1.05
PCM1-212ENST00000519253 GNA12Q03113 381 aa8.52□□□□□ -1.05
PCM1-212ENST00000519253 CACNB2Q08289 660 aaPredicted RBP8.52□□□□□ -1.05
PCM1-212ENST00000519253 TAZQ16635 292 aa8.52□□□□□ -1.05
PCM1-212ENST00000519253 MAPKAPK3Q16644 382 aa8.52□□□□□ -1.05
PCM1-212ENST00000519253 TTLL9Q3SXZ7 439 aa8.52□□□□□ -1.05
PCM1-212ENST00000519253 PITRM1Q5JRX3 1037 aa8.52□□□□□ -1.05
PCM1-212ENST00000519253 SORT1Q99523 831 aa8.52□□□□□ -1.05
PCM1-212ENST00000519253 GMIPQ9P107 970 aa8.52□□□□□ -1.05
PCM1-212ENST00000519253 CRNNQ9UBG3 495 aaPredicted RBP8.52□□□□□ -1.05
PCM1-212ENST00000519253 ARPC2O15144 300 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 RGS14O43566 566 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 UGT2B11O75310 529 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 RECQL4O94761 1208 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 BMP2P12643 396 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 IFNA8P32881 189 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 PURAQ00577 322 aaKnown RBP8.51□□□□□ -1.05
PCM1-212ENST00000519253 PCBP1Q15365 356 aaKnown RBP eCLIP8.51□□□□□ -1.05
PCM1-212ENST00000519253 FAM187BQ17R55 369 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 CLEC6AQ6EIG7 209 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 HACD2Q6Y1H2 254 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 GPRIN3Q6ZVF9 776 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 GPR180Q86V85 440 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 TMEM86AQ8N2M4 240 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 TMEM132CQ8N3T6 1108 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 ZNF597Q96LX8 424 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 MROH8Q9H579 483 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 RIMS3Q9UJD0 308 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 GRK3P35626 688 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 TPTEP56180 551 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 INCA1Q0VD86 236 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 LCP2Q13094 533 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 FBXL19Q6PCT2 694 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 IL27RAQ6UWB1 636 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 GPSM1Q86YR5 675 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 RIOX2Q8IUF8 465 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 RPRD1AQ96P16 312 aaPredicted RBP8.51□□□□□ -1.05
PCM1-212ENST00000519253 TSPAN18Q96SJ8 248 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 APOL5Q9BWW9 433 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 TEX12Q9BXU0 123 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 SDHDO14521 159 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 USP17L7P0C7H9 530 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 IMPDH1P20839 514 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 CCNCP24863 283 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 POLR2JP52435 117 aaKnown RBP8.51□□□□□ -1.05
PCM1-212ENST00000519253 DNAJB13P59910 316 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 DEPDC1Q5TB30 811 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 ZNF549Q6P9A3 640 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 DCLRE1AQ6PJP8 1040 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 SAMD7Q7Z3H4 446 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 MILR1Q7Z6M3 343 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 SLC51AQ86UW1 340 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 DCP1BQ8IZD4 617 aaKnown RBP8.51□□□□□ -1.05
PCM1-212ENST00000519253 MYDGFQ969H8 173 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 GLT1D1Q96MS3 346 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 ZNF347Q96SE7 839 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 ACOX2Q99424 681 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 TEKT2Q9UIF3 430 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 IRF6O14896 467 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 LSM1O15116 133 aaKnown RBP8.51□□□□□ -1.05
PCM1-212ENST00000519253 VILLO15195 856 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 CAPN15O75808 1086 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 DNAJB5O75953 348 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 RAP2AP10114 183 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 MTHFRP42898 656 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 IL2P60568 153 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 OLIG1Q8TAK6 271 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 TBCDQ9BTW9 1192 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 NUSAP1Q9BXS6 441 aaKnown RBP8.51□□□□□ -1.05
PCM1-212ENST00000519253 REEP1Q9H902 201 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 PTPRHQ9HD43 1115 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 CATSPERZQ9NTU4 200 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 RGPD5Q99666 1765 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 KLRG2A4D1S0 409 aaPredicted RBP8.51□□□□□ -1.05
PCM1-212ENST00000519253 H0YAE9 185 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 ADORA2AP29274 412 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 HALP42357 657 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 GMPSP49915 693 aaPredicted RBP8.51□□□□□ -1.05
PCM1-212ENST00000519253 HLCSP50747 726 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 ARPP19P56211 112 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 MS4A2Q01362 244 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 RELAQ04206 551 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 SKIV2LQ15477 1246 aaKnown RBP8.51□□□□□ -1.05
PCM1-212ENST00000519253 TMEM214Q6NUQ4 689 aaKnown RBP8.51□□□□□ -1.05
PCM1-212ENST00000519253 ESRP1Q6NXG1 681 aaKnown RBP8.51□□□□□ -1.05
PCM1-212ENST00000519253 DNAJC14Q6Y2X3 702 aaPredicted RBP8.51□□□□□ -1.05
PCM1-212ENST00000519253 GTF3C2Q8WUA4 911 aaPredicted RBP8.51□□□□□ -1.05
PCM1-212ENST00000519253 NTAN1Q96AB6 310 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 SERPINB11Q96P15 392 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 COLEC11Q9BWP8 271 aa8.51□□□□□ -1.05
PCM1-212ENST00000519253 PRSS51A0A1B0GVH4 220 aa8.5□□□□□ -1.05
PCM1-212ENST00000519253 ZNF99A8MXY4 864 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms