RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 FAM207AQ9NSI2 230 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 SACM1LQ9NTJ5 587 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 AGPAT5Q9NUQ2 364 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 GLTPQ9NZD2 209 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 TRPM5Q9NZQ8 1165 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 MBD1Q9UIS9 605 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 ZMYM5Q9UJ78 669 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 ENPP5Q9UJA9 477 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 LAMP5Q9UJQ1 280 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 VPS28Q9UK41 221 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 TCFL5Q9UL49 500 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 MKLN1Q9UL63 735 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 PCDHB10Q9UN67 800 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 PLA2G4CQ9UP65 541 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 NAALADL1Q9UQQ1 740 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 SESN1Q9Y6P5 492 aa4.83□□□□□ -1.64
HMGB1P19-201ENST00000517578 BICRAQ9NZM4 1560 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 SETBP1Q9Y6X0 1596 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 BCL9LQ86UU0 1499 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 TNKSO95271 1327 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 MROH5Q6ZUA9 1318 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 RPTORQ8N122 1335 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 A0A0A6YYJ9 748 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 A0A0G2JND7 137 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 LOC100653049A0A140TA62 436 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 GSTTP1A0A1W2PQM5 241 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 TMEM82A0PJX8 343 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 PQLC2LA1A4F0 135 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 OR14I1A6ND48 311 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 CAPN8A6NHC0 703 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 TUBAL3A6NHL2 446 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 HMX3A6NHT5 357 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 C12orf71A8MTZ7 269 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 A8MVJ9 347 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 SLCO1B7G3V0H7 640 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 IFRD1O00458 451 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 TSPAN4O14817 238 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 ZNF263O14978 683 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 KIAA0355O15063 1070 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 PHGDHO43175 533 aaKnown RBP4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 THAP12O43422 761 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 TRIM13O60858 407 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 NDUFS2O75306 463 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 KRT34O76011 436 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 PRKD3O94806 890 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 RHOBTB1O94844 696 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 KLHL18O94889 574 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 SNX4O95219 450 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 APBB3O95704 486 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 FTCDO95954 541 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 CCNE2O96020 404 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 CHRNA1P02708 482 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 SERPINA6P08185 405 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 H2AFZP0C0S5 128 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 HSMCR30P0CW71 290 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 SRCP12931 536 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 CA4P22748 312 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 PEX2P28328 305 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 CCND2P30279 289 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 HOXA6P31267 233 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 BMPR1AP36894 532 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 CASP3P42574 277 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 SLCO1A2P46721 670 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 TPMTP51580 245 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 PSMC5P62195 406 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 SSRP1Q08945 709 aaKnown RBP4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 TEFQ10587 303 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 SF3A3Q12874 501 aaKnown RBP eCLIP4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 EPS8Q12929 822 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 PPIL2Q13356 520 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 FLOT2Q14254 428 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 KCNAB1Q14722 419 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 FASTKD3Q14CZ7 662 aaKnown RBP4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 TOMM20Q15388 145 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 TRADDQ15628 312 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 KLHL12Q53G59 568 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 ZNF385BQ569K4 471 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 FAM209BQ5JX69 171 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 NOL9Q5SY16 702 aaKnown RBP4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 ADGRF1Q5T601 910 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 UBE2UQ5VVX9 321 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 KRT79Q5XKE5 535 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 LPCAT4Q643R3 524 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 TIGD3Q6B0B8 471 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 RETSATQ6NUM9 610 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 PPP1R2P3Q6NXS1 205 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 C16orf89Q6UX73 402 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 KSR2Q6VAB6 950 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 ZPBP2Q6X784 338 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 RNF111Q6ZNA4 994 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 TOM1L2Q6ZVM7 507 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 H2AFVQ71UI9 128 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 RRAGAQ7L523 313 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 DPH6Q7L8W6 267 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 GPR142Q7Z601 462 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 TFAP2DQ7Z6R9 452 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 NEK8Q86SG6 692 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 AMIGO2Q86SJ2 522 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 TRABD2AQ86V40 505 aa4.82□□□□□ -1.64
HMGB1P19-201ENST00000517578 CHSY1Q86X52 802 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms